Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0127
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 34 0.13
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 33 0.17
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 29 2.8
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 29 2.8
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 29 2.8
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.8
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 2.8
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.8
Z82082-11|CAH10808.1| 721|Caenorhabditis elegans Hypothetical p... 29 3.6
Z82082-9|CAB04966.2| 586|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL132902-16|CAB82004.2| 721|Caenorhabditis elegans Hypothetical... 29 3.6
U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical... 29 4.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 6.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 33.9 bits (74), Expect = 0.13
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -3
Query: 483 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 307
NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 306 TQKLFAAPVDD*LHGIGFTLRI 241
+L A P+D L + LRI
Sbjct: 1538 EVRL-AKPLDPELQHVESILRI 1558
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 33.9 bits (74), Expect = 0.13
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -3
Query: 483 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 307
NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 306 TQKLFAAPVDD*LHGIGFTLRI 241
+L A P+D L + LRI
Sbjct: 1538 EVRL-AKPLDPELQHVESILRI 1558
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 33.9 bits (74), Expect = 0.13
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -3
Query: 483 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 307
NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 306 TQKLFAAPVDD*LHGIGFTLRI 241
+L A P+D L + LRI
Sbjct: 1538 EVRL-AKPLDPELQHVESILRI 1558
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 33.5 bits (73), Expect = 0.17
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 275 SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKK 454
SST + S + + T++P T K T TS+PTS + T A ++ +
Sbjct: 162 SSTASVSSTILSSTATTMVTSTPT-TEKSSTTTTSTPTSEATSTTTAMITTTSGTTENPT 220
Query: 455 TT-CPTK*SELWSHPT 499
TT CPTK HPT
Sbjct: 221 TTDCPTKVCRYGFHPT 236
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 552 PNHE-HPQR--VHQLVRVVCEPRHMGGTSTNPIGLHSAQTLAEEEGNP 686
P H+ PQR V Q R + +PR++ S P L A ++ GNP
Sbjct: 373 PQHQGQPQRIPVDQYGRPLVDPRYLNDPSHRPSSLDDAPFYVDKYGNP 420
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 552 PNHE-HPQR--VHQLVRVVCEPRHMGGTSTNPIGLHSAQTLAEEEGNP 686
P H+ PQR V Q R + +PR++ S P L A ++ GNP
Sbjct: 337 PQHQGQPQRIPVDQYGRPLVDPRYLNDPSHRPSSLDDAPFYVDKYGNP 384
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 552 PNHE-HPQR--VHQLVRVVCEPRHMGGTSTNPIGLHSAQTLAEEEGNP 686
P H+ PQR V Q R + +PR++ S P L A ++ GNP
Sbjct: 340 PQHQGQPQRIPVDQYGRPLVDPRYLNDPSHRPSSLDDAPFYVDKYGNP 387
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 552 PNHE-HPQR--VHQLVRVVCEPRHMGGTSTNPIGLHSAQTLAEEEGNP 686
P H+ PQR V Q R + +PR++ S P L A ++ GNP
Sbjct: 6961 PQHQGQPQRIPVDQYGRPLVDPRYLNDPSHRPSSLDDAPFYVDKYGNP 7008
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 552 PNHE-HPQR--VHQLVRVVCEPRHMGGTSTNPIGLHSAQTLAEEEGNP 686
P H+ PQR V Q R + +PR++ S P L A ++ GNP
Sbjct: 6385 PQHQGQPQRIPVDQYGRPLVDPRYLNDPSHRPSSLDDAPFYVDKYGNP 6432
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 552 PNHE-HPQR--VHQLVRVVCEPRHMGGTSTNPIGLHSAQTLAEEEGNP 686
P H+ PQR V Q R + +PR++ S P L A ++ GNP
Sbjct: 7025 PQHQGQPQRIPVDQYGRPLVDPRYLNDPSHRPSSLDDAPFYVDKYGNP 7072
>Z82082-11|CAH10808.1| 721|Caenorhabditis elegans Hypothetical
protein Y71A12B.12a protein.
Length = 721
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 511 TNTELVWLKRAAACPIMNIHSEYTNSFESFVN 606
T +L WL+ A C + +E++ F SFVN
Sbjct: 147 TGQQLPWLRSLALCGLKFYKTEFSKIFPSFVN 178
>Z82082-9|CAB04966.2| 586|Caenorhabditis elegans Hypothetical
protein Y71A12B.12b protein.
Length = 586
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 511 TNTELVWLKRAAACPIMNIHSEYTNSFESFVN 606
T +L WL+ A C + +E++ F SFVN
Sbjct: 12 TGQQLPWLRSLALCGLKFYKTEFSKIFPSFVN 43
>AL132902-16|CAB82004.2| 721|Caenorhabditis elegans Hypothetical
protein Y71A12B.12a protein.
Length = 721
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 511 TNTELVWLKRAAACPIMNIHSEYTNSFESFVN 606
T +L WL+ A C + +E++ F SFVN
Sbjct: 147 TGQQLPWLRSLALCGLKFYKTEFSKIFPSFVN 178
>U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical
protein C50E3.3 protein.
Length = 128
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 406 WGVWV*GWRRGTRPSPLGRLQWGSCPQQNGSKFHAKTLCRSS 281
WGVW GTR + G + C G KF+ KTL S
Sbjct: 24 WGVWF----DGTRKTKCGPSELTQCNSLKGFKFNDKTLVSKS 61
>AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical
protein F56D6.15 protein.
Length = 395
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 356 KR*WTCTSSPTSNPHA--PTGATSSSLNTLLGGKKT 457
K + C+ PT P A PT T++++N LGG++T
Sbjct: 113 KNYFVCSYDPTVQPKATTPTTTTAANVNCPLGGQQT 148
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 332 TASPL*TTKR*WTCTSSPTSNPHAPTGATSS-SLNTLLGGKKTTCPTK*SELWSHPT 499
T +P TT T T++PT+ PT T++ + T + TT PT + + PT
Sbjct: 179 TTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPT 235
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 332 TASPL*TTKR*WTCTSSPTSNPHAPTGATSS-SLNTLLGGKKTTCPT 469
T +P TT T T++PT+ APT T++ + T TT PT
Sbjct: 172 TTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPT 218
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = +2
Query: 275 SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKK 454
S++G S L + + T SP +T+ T TS P+S+P T + SSS T +
Sbjct: 1960 STSGTNPSSPRSLSQITI-TPSPSQSTES--TQTSLPSSSPSPSTHSVSSSEGTTMSSGA 2016
Query: 455 TTCPTK*SELWSHPT 499
TT K S L S T
Sbjct: 2017 TTSGDKMSFLSSTGT 2031
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,909,999
Number of Sequences: 27780
Number of extensions: 461279
Number of successful extensions: 1296
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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