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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0125
         (694 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   175   7e-45
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...   103   2e-23
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...   101   1e-22
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...    94   1e-20
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    69   5e-13
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    64   1e-11
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    53   3e-08
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    44   2e-05
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce...    32   0.090
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|...    30   0.28 
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    30   0.36 
SPCC24B10.03 |||sequence orphan|Schizosaccharomyces pombe|chr 3|...    27   2.6  
SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    27   2.6  
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po...    27   2.6  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    27   3.4  
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    27   3.4  
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr...    26   4.5  
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p...    26   4.5  
SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cu...    26   4.5  
SPBC13G1.14c |||RNA-binding protein|Schizosaccharomyces pombe|ch...    26   5.9  
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch...    26   5.9  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  175 bits (425), Expect = 7e-45
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = +1

Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
           ++GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMT
Sbjct: 61  KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMT 120

Query: 430 QIMFETFNTPAMYVAIQAVLSLYASG 507
           QI+FETFN PA YVAIQAVLSLYASG
Sbjct: 121 QIIFETFNAPAFYVAIQAVLSLYASG 146



 Score =  121 bits (291), Expect = 1e-28
 Identities = 53/58 (91%), Positives = 57/58 (98%)
 Frame = +2

Query: 74  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
           +EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQ
Sbjct: 2   EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQ 59



 Score = 62.1 bits (144), Expect = 7e-11
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 510 TTGIVLDSGDGVFHTVPIYEGYALPHAIL 596
           TTGIVLDSGDGV HTVPIYEGYALPHAI+
Sbjct: 148 TTGIVLDSGDGVTHTVPIYEGYALPHAIM 176


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score =  103 bits (248), Expect = 2e-23
 Identities = 43/86 (50%), Positives = 65/86 (75%)
 Frame = +1

Query: 253 KGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 432
           + +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P    +LLTE P+NP ANREKM +
Sbjct: 62  RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121

Query: 433 IMFETFNTPAMYVAIQAVLSLYASGL 510
            MFE +    +YVAIQAVLSLYA GL
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGL 147



 Score = 54.0 bits (124), Expect = 2e-08
 Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = +2

Query: 80  EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQ 247
           E A +V+DNG+G  K G+A D+ PR  FPSIVGRP  R +     +  KD  VGDEA+
Sbjct: 2   ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAE 59



 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = +3

Query: 510 TTGIVLDSGDGVFHTVPIYEGYALPHAI 593
           ++G+V+DSGDGV H VP+YE   L H +
Sbjct: 148 SSGVVVDSGDGVTHIVPVYESVVLNHLV 175


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score =  101 bits (241), Expect = 1e-22
 Identities = 43/80 (53%), Positives = 55/80 (68%)
 Frame = +1

Query: 265 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 444
           +L YPI HG + NWD ME+ W  + +  LR  PE+H  LLTE PLNP  NRE   +IMFE
Sbjct: 89  SLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFE 148

Query: 445 TFNTPAMYVAIQAVLSLYAS 504
           +FN   +Y+A+QAVL+L AS
Sbjct: 149 SFNCAGLYIAVQAVLALAAS 168



 Score = 42.7 bits (96), Expect = 5e-05
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
 Frame = +2

Query: 92  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKDSYVGDE 241
           +++DNG+G  K G+AG+DAP  VFP+++   R  G   G  +  K SY+  +
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYMASK 58



 Score = 41.5 bits (93), Expect = 1e-04
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 504 RSTTGIVLDSGDGVFHTVPIYEGYALPHAI 593
           RS TG V+DSGDGV H +P+ EGY +  +I
Sbjct: 177 RSLTGTVVDSGDGVTHIIPVAEGYVIGSSI 206


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 94.3 bits (224), Expect = 1e-20
 Identities = 41/85 (48%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
 Frame = +1

Query: 253 KGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMT 429
           +G+L ++ PIE GI+ NW DME+IW + + ++ L   PEEHP+LLTE PL    N+EK+ 
Sbjct: 66  RGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIA 125

Query: 430 QIMFETFNTPAMYVAIQAVLSLYAS 504
           +  +ET N PA+  ++Q VL+LYAS
Sbjct: 126 EYFYETLNVPALSFSLQPVLALYAS 150



 Score = 69.3 bits (162), Expect = 5e-13
 Identities = 30/52 (57%), Positives = 38/52 (73%)
 Frame = +2

Query: 92  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
           + +DNGSG  KAGFAGDD P+ +FP+ VGR +H+ VM    QKD +VG EAQ
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQ 63



 Score = 47.2 bits (107), Expect = 2e-06
 Identities = 22/39 (56%), Positives = 29/39 (74%)
 Frame = +3

Query: 477 PSRALAVRVRSTTGIVLDSGDGVFHTVPIYEGYALPHAI 593
           P  AL    R TTGIVL+ GDG+ H+VPIY+G+++P AI
Sbjct: 143 PVLALYASAR-TTGIVLECGDGLTHSVPIYDGFSIPSAI 180


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 69.3 bits (162), Expect = 5e-13
 Identities = 32/82 (39%), Positives = 46/82 (56%)
 Frame = +1

Query: 262 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 441
           + +K  I +G V NWD    +W +    +L+  P EHP+L+TE   NP  NR K  + MF
Sbjct: 63  MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122

Query: 442 ETFNTPAMYVAIQAVLSLYASG 507
           E+   PA Y+A Q   + +ASG
Sbjct: 123 ESLRCPATYLAKQETCAAFASG 144



 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +2

Query: 77  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 178
           +EV+A+V+D GS   + GF+G+D P+ V PS  G
Sbjct: 9   DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 64.5 bits (150), Expect = 1e-11
 Identities = 29/82 (35%), Positives = 47/82 (57%)
 Frame = +1

Query: 277 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 456
           P E  +++NWD ME++  +TF  +L +   EHP+ +TE   NP   R  MT+++FE +N 
Sbjct: 86  PFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNA 144

Query: 457 PAMYVAIQAVLSLYASGLPPVS 522
           P++   I  + S Y +  P  S
Sbjct: 145 PSVAYGIDGLFSFYHNTKPSSS 166



 Score = 35.9 bits (79), Expect = 0.006
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +2

Query: 92  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 187
           LV+DNGS   +AG+ G+  P+ VF ++V R R
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58



 Score = 25.8 bits (54), Expect = 5.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 507 STTGIVLDSGDGVFHTVPIYEG 572
           S++GIVL+ G+   H +P+  G
Sbjct: 164 SSSGIVLNLGNAASHVIPVLNG 185


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 53.2 bits (122), Expect = 3e-08
 Identities = 22/73 (30%), Positives = 42/73 (57%)
 Frame = +1

Query: 286 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 465
           +GI+ +W+     W      +L+V P E+ +++TE   NP++ R+++ +  FE  + PA 
Sbjct: 74  NGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAF 133

Query: 466 YVAIQAVLSLYAS 504
           Y+  QAV   +A+
Sbjct: 134 YLTKQAVCVAFAN 146



 Score = 38.7 bits (86), Expect = 8e-04
 Identities = 20/57 (35%), Positives = 33/57 (57%)
 Frame = +2

Query: 77  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
           EE+ +LV+D GS   + G+AG+++P  + PS      + GV   +  ++ YV DE Q
Sbjct: 8   EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQ 58


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = +1

Query: 277 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 444
           PI+ G V +W+ ++  W H  Y+ L   P +    +PV L         +RE  TQ  FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171

Query: 445 TFNTPAMYVAIQAVLSLYASGL 510
               P   +A + ++ LYA G+
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGI 193


>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1666

 Score = 31.9 bits (69), Expect = 0.090
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = +1

Query: 337  FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 480
            +Y  L    E+HP+LLT+  A L P+ +  ++ +I  ++ NTP +    VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451


>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 743

 Score = 30.3 bits (65), Expect = 0.28
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = +1

Query: 514 PVSCWTPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSPEPRGTWF 681
           P S  TP   ++T  P+T DTH P        GP+ D   +PS       P    F
Sbjct: 280 PQSGSTPQMQNTTSQPTTHDTHPPKQQ-----GPISDFRSIPSSPKTEGAPSNAQF 330


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 29.9 bits (64), Expect = 0.36
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -2

Query: 234 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 73
           PT  S  P+ PT+ P     P    N     S P         PL+TTN  TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455


>SPCC24B10.03 |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 128

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 634 LPSWKNPSPEPRGTWFHL 687
           +  WKN  P  +G W HL
Sbjct: 24  MKDWKNSQPNEQGRWLHL 41


>SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 601

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 554 GVEDTVAGVQHDTGGRPDA-YSESTAWMATYMAGVLNVSNMIWVIF 420
           GV+DT+  + +   G+P   Y EST + A  +    N++ + W ++
Sbjct: 402 GVQDTLTAIWNTNSGKPSGWYLESTMYKALDVT-YYNLNTLSWNLY 446


>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 320

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +1

Query: 481 AVLSLYASGLPPV---SCWTPATVSSTPCPSTRDTHSPTP 591
           ++LSLYAS  P V   S  T AT  + P P +  T S  P
Sbjct: 218 SILSLYASPRPQVSSSSITTNATYQNLPSPVSTSTTSSQP 257


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 237 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 121
           S T +SF   P+PT  P    LPT   NT +    P+ PAL
Sbjct: 64  SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 245 VPHLLHKSPSVPYRPSRPDGGAFPRSRET 159
           +  L+ K+PS PY  SRP   A   S  T
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPT 334


>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1517

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 137 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 241
           G+  PRA F  ++  P H G+++ M  KD   G+E
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEE 534


>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 379 LLTEAPLNPKANREKMTQIMFETFN 453
           +L  APL+ +   +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205


>SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cuf1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 411

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 22/88 (25%), Positives = 37/88 (42%)
 Frame = +1

Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
           QI++   NT ++  A  A   LY     P++    A  +  P PS+ +T+ P+ S   + 
Sbjct: 234 QILYNN-NTDSI-AAAAATHDLYPQPDVPLTFAMLADGNYVPLPSSTNTYGPSNSYGYEI 291

Query: 610 GPVRDLTRLPSWKNPSPEPRGTWFHLPT 693
                   + S   P P     +F LP+
Sbjct: 292 NINESTNHVDSSYLPHPIQLSNYFTLPS 319


>SPBC13G1.14c |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 243

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -3

Query: 263 RIPFCSVPHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSR 126
           R PF S+ H  HK     YRPSR    +    +   R  +   RSR
Sbjct: 176 RFPFESL-HKNHKHYENSYRPSRSQNNSHYNDKSFHRSRYSRARSR 220


>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 397

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 22/76 (28%), Positives = 31/76 (40%)
 Frame = +1

Query: 415 REKMTQIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPS 594
           RE++ Q+  +    P+ Y+     LS Y S         P +  S   PST   HSP P 
Sbjct: 134 RERLNQVELQLSERPSSYLGYHNNLSPYRS---------PNSYPSL-LPSTHSPHSPAPL 183

Query: 595 LRLDFGPVRDLTRLPS 642
             +    +R  T  PS
Sbjct: 184 STMQTALMRLRTYHPS 199


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,178,215
Number of Sequences: 5004
Number of extensions: 73297
Number of successful extensions: 246
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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