Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0125
(694 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 186 2e-47
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 184 8e-47
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 184 8e-47
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 184 8e-47
12_02_1282 + 27528159-27529148,27529549-27529614 183 1e-46
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 182 2e-46
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 182 3e-46
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 181 4e-46
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 181 4e-46
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 180 7e-46
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 107 8e-24
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 96 2e-20
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 96 3e-20
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 83 2e-16
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 52 6e-07
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 48 9e-06
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 45 7e-05
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 43 3e-04
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 40 0.001
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 40 0.002
03_06_0129 - 31883732-31883854,31883989-31884051,31884213-318842... 32 0.38
01_01_0536 - 3926450-3928447 31 1.1
11_06_0610 - 25449085-25453284 30 1.5
08_01_0656 + 5652383-5653009,5653260-5653736,5654969-5655289,565... 30 2.0
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 30 2.0
11_03_0208 - 11682869-11683459 29 3.5
03_01_0591 - 4366400-4366558,4366782-4366985,4367078-4367152,436... 29 3.5
08_01_0878 + 8624616-8624761,8625861-8626274,8626895-8626945,862... 29 4.6
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 29 4.6
10_08_0029 + 14270945-14271364,14271449-14272486 28 6.1
08_02_0406 + 16813099-16813166,16813914-16814480,16814549-168145... 28 6.1
06_03_0395 - 20354713-20355570 28 6.1
03_06_0331 - 33181757-33181795,33182325-33182453,33182941-331829... 28 6.1
02_02_0572 + 11667455-11670783,11672026-11672419 28 6.1
01_06_1607 + 38605100-38605364,38605415-38605722,38606213-38606977 28 6.1
01_01_0773 + 6002563-6003069,6003183-6003299,6003447-6003539 28 6.1
01_01_0715 - 5542648-5543219,5543352-5543544 28 6.1
08_01_1006 - 10191817-10191822,10192449-10192745,10192826-101929... 28 8.1
06_01_0121 - 932334-933074,933189-933272,934602-935006 28 8.1
04_01_0208 + 2596110-2596928 28 8.1
03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093 28 8.1
03_05_0266 + 22537578-22538081 28 8.1
03_02_0812 - 11439258-11439409,11439537-11439612,11439860-114400... 28 8.1
02_04_0107 - 19804730-19805044 28 8.1
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 186 bits (452), Expect = 2e-47
Identities = 94/127 (74%), Positives = 97/127 (76%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFNTPAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 1e-23
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 184 bits (447), Expect = 8e-47
Identities = 93/127 (73%), Positives = 96/127 (75%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 1e-23
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 184 bits (447), Expect = 8e-47
Identities = 93/127 (73%), Positives = 96/127 (75%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 1e-23
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 184 bits (447), Expect = 8e-47
Identities = 93/127 (73%), Positives = 96/127 (75%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 1e-23
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 183 bits (446), Expect = 1e-46
Identities = 93/127 (73%), Positives = 95/127 (74%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 105 bits (253), Expect = 3e-23
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
+++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 92/127 (72%), Positives = 95/127 (74%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMT 121
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 122 QIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFTLPHAILRLDL 181
Query: 610 GPVRDLT 630
RDLT
Sbjct: 182 AG-RDLT 187
Score = 109 bits (261), Expect = 3e-24
Identities = 48/60 (80%), Positives = 54/60 (90%)
Frame = +2
Query: 68 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 182 bits (442), Expect = 3e-46
Identities = 92/127 (72%), Positives = 95/127 (74%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE+HPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREKMT 121
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETFN PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 122 QIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYTLPHAILRLDL 181
Query: 610 GPVRDLT 630
RDLT
Sbjct: 182 AG-RDLT 187
Score = 110 bits (265), Expect = 9e-25
Identities = 49/60 (81%), Positives = 54/60 (90%)
Frame = +2
Query: 68 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 181 bits (441), Expect = 4e-46
Identities = 91/127 (71%), Positives = 96/127 (75%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFETF+ PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 1e-23
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 181 bits (441), Expect = 4e-46
Identities = 81/86 (94%), Positives = 84/86 (97%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASG 507
QIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASG 148
Score = 107 bits (256), Expect = 1e-23
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +3
Query: 519 IVLDSGDGVFHTVPIYEGYALPHAIL 596
IVLDSGDGV HTVPIYEGYALPHAIL
Sbjct: 150 IVLDSGDGVTHTVPIYEGYALPHAIL 175
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 180 bits (439), Expect = 7e-46
Identities = 91/127 (71%), Positives = 95/127 (74%)
Frame = +1
Query: 250 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 429
++GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPKANREKMT 122
Query: 430 QIMFETFNTPAMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLRLDF 609
QIMFE+FN PAMYVAIQAVLSLYASG S P P LRLD
Sbjct: 123 QIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
Query: 610 GPVRDLT 630
RDLT
Sbjct: 183 AG-RDLT 188
Score = 107 bits (256), Expect = 1e-23
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 107 bits (257), Expect = 8e-24
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +1
Query: 262 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 441
L + YP+ +GIV +WDDM IW H FY+EL+V P E +LLT+ PLNP NREKM + MF
Sbjct: 66 LDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMF 125
Query: 442 ETFNTPAMYVAIQAVLSLYASGL 510
E +N +++ +QAVLSLYA GL
Sbjct: 126 EKYNFAGVFIQVQAVLSLYAQGL 148
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 92 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 184
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
Score = 42.7 bits (96), Expect = 3e-04
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +3
Query: 513 TGIVLDSGDGVFHTVPIYEGYALPH 587
TG+V+DSGDGV H VP+ +G++ PH
Sbjct: 150 TGLVIDSGDGVTHVVPVVDGFSYPH 174
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +1
Query: 247 EQKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 426
+ G+ T K+PI HG V +WD ME+ W +N LR PEEH LLT++P++ +RE
Sbjct: 79 KSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTDSPVSTPESRECA 138
Query: 427 TQIMFETFNTPAMYVAIQAVLSLYA 501
+IMFETFN P +Y+++Q+VLSL A
Sbjct: 139 GEIMFETFNVPGLYISVQSVLSLSA 163
Score = 34.3 bits (75), Expect = 0.093
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 89 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 175
A+V+DNG+G K GF+G+ P P++V
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVV 36
Score = 34.3 bits (75), Expect = 0.093
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 513 TGIVLDSGDGVFHTVPIYEGYALPHAI 593
TG+V+D GDG H VP+ GY + +I
Sbjct: 188 TGVVVDIGDGAPHVVPVVNGYVIGSSI 214
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/86 (51%), Positives = 54/86 (62%)
Frame = +1
Query: 268 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 447
L YPI +G V NWD ME+ W +N LR PE+H LLTE+PL P RE +IMFET
Sbjct: 87 LSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFET 146
Query: 448 FNTPAMYVAIQAVLSLYASGLPPVSC 525
FN P +Y+A Q VL+L A+G C
Sbjct: 147 FNVPGLYIACQPVLAL-AAGYTTTKC 171
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 462 HVRRHPSRALAVRVRST----TGIVLDSGDGVFHTVPIYEGYALPHAI 593
++ P ALA +T TG+V+D GDG H VP+ +GY + +I
Sbjct: 153 YIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSI 200
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 89 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 175
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV 36
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 83.0 bits (196), Expect = 2e-16
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +1
Query: 277 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 456
P++ G VT+WD ++ IW+H F L + PEEHP+L+ E N REK ++MFE +
Sbjct: 137 PMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKV 196
Query: 457 PAMYVAIQAVLSLYASG 507
PA+++A AVL+ +ASG
Sbjct: 197 PALFLAKNAVLTSFASG 213
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 77 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 172
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 277 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 423
P++ G +WD ++ IW+H F L + PEEHP+L+ E N REK
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPMLIVEPSTNTGQQREK 140
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 262 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 441
+TL+ PI+ G + N + ++W N L+V P +LL E NP A + +++F
Sbjct: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVF 119
Query: 442 ETFNTPAMYVA-IQAVLSLYASGLPP 516
E ++ VA +++ LY + P
Sbjct: 120 EELGFKSLCVADAPSLVHLYEASRQP 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 92 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 184
+V+DNG G+ KAGF GD P AV P+ + +P
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP 38
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +1
Query: 268 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 447
++ P + +V ++ ME I F + HP+L+TE NP +R +M++++FET
Sbjct: 82 IRSPFDDDVVYQFEYMEYILDFGFDRLGATSEVGHPILMTECECNPSFSRARMSELLFET 141
Query: 448 FNTPAM 465
+ P++
Sbjct: 142 YGVPSI 147
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 92 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 238
+V+DNG+ + G+AG+ PR F +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHR----SSGETVTVVGD 66
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 277 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 423
P++ G +WD ++ IW+H F PEEHP+L+ E N REK
Sbjct: 173 PMKDGTFIDWDIVDNIWNHAF----SFYPEEHPMLIVEPSTNTGQQREK 217
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1
Query: 406 KANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 507
+A RE++ Q+MFE FN Y + QAVLSLYA G
Sbjct: 156 QALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVG 189
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 89 ALVVDNGSGMCKAGFA-GDDAPRAVFPS 169
A+VVD GS + KAG A D +P V PS
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS 30
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 277 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 423
P++ G +WD ++ IW+H F EEHP+L+ E N REK
Sbjct: 74 PMKDGTFIDWDIVDNIWNHAF----SFYAEEHPMLIVEPSTNTGQQREK 118
>03_06_0129 -
31883732-31883854,31883989-31884051,31884213-31884272,
31884724-31884784,31884934-31885004,31885313-31885389,
31885856-31885913,31885995-31886048,31886279-31886297,
31886359-31886466,31886574-31886690,31886836-31886919,
31887079-31887171,31887279-31887499,31888294-31888371,
31889237-31889499,31890109-31890247
Length = 562
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 619 GPAQSPDARMAWGSAYPS*MGTVWKTPSPESSTIPV 512
GP RM G+ P+ G +W TPS E TI V
Sbjct: 44 GPRGCSAVRMETGAVEPASTGAIWSTPSVEPRTISV 79
>01_01_0536 - 3926450-3928447
Length = 665
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = -3
Query: 572 SLVDGHGVEDTVAG-VQHDTGG-RPDAYS 492
S V GHG E+ VAG V+ GG RPDAY+
Sbjct: 25 SSVSGHGAEEAVAGYVRMLAGGARPDAYT 53
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 529 TPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSPEPRGTWFHLPT 693
TP + +S+P P T + H+P+P P P ++ SP P H+P+
Sbjct: 653 TPESKASSPPPPTPEGHTPSPPKSTP--PTEKSPPTPESESSSPPPPAPEGHMPS 705
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +1
Query: 529 TPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSPEPRGTWFHLPT 693
TP + SS+P P + H P+P PV P + SP P H P+
Sbjct: 686 TPESESSSPPPPAPEGHMPSPPKSTP--PVEKSPPTPESEASSPPPPAPEGHTPS 738
>08_01_0656 +
5652383-5653009,5653260-5653736,5654969-5655289,
5655434-5655589,5656062-5656127,5656196-5656315
Length = 588
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 460 AMYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPSTRDTHSPTPSLR 600
A+ VA V S S L P S W A +SS+P P+ +H P+ R
Sbjct: 309 AVLVADLVVASRRGSSLSPHSHWPVAALSSSP-PAPSSSHVSRPAFR 354
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +1
Query: 334 TFYNELRVAPEEHPVLL---------TE-APLNPKANREKMTQIMFETFNTPAMYVAIQA 483
T Y ++V P P+++ TE A + K R+ + ++F+ N PA+ QA
Sbjct: 188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQA 246
Query: 484 VLSLYAS 504
VL+LYA+
Sbjct: 247 VLALYAA 253
>11_03_0208 - 11682869-11683459
Length = 196
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +2
Query: 512 HRYRAGLRRRCLPH-RAHLRGIRTPPRHPCVWTLGRSVTLQDYPHGRIPHPS 664
H R RR C H +H RG R P R P R V Q P + P P+
Sbjct: 11 HHRRPRRRRSCRSHLHSHHRGGRAPARRPREGCQCRRVLHQVPPRPQAPPPT 62
>03_01_0591 -
4366400-4366558,4366782-4366985,4367078-4367152,
4367240-4367394,4367476-4367596,4367720-4367794,
4369435-4369572,4369655-4369765,4369844-4369948,
4370327-4370405,4370561-4370622,4370698-4370763,
4370840-4371024,4371095-4371173
Length = 537
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 447 IQHARHVRRHPSRALAVRVRSTTGIVLDSGDGVFHTVPIY 566
I+ AR V + P A+R+ TTGIV+ G G + Y
Sbjct: 451 IEAARAVNKAPDVFYALRLLDTTGIVVTPGSGFGQIIRCY 490
>08_01_0878 +
8624616-8624761,8625861-8626274,8626895-8626945,
8627179-8627215,8629535-8630059
Length = 390
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 503 PVYHRYRAGLRRRCLPHRAHLRGIRTPP 586
P +HR+R RRR PHR+ LR PP
Sbjct: 291 PAHHRHR---RRRRGPHRSPLRAPHAPP 315
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 189 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 70
WR P + + ARG S P + AL +P++ +++ H
Sbjct: 251 WRRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEH 290
>10_08_0029 + 14270945-14271364,14271449-14272486
Length = 485
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -3
Query: 242 PHLLHKSPSVPY---RPSRPDGGAFPRSRETLREEHHL 138
PHL P P+ +PSR GG PRS + R H+
Sbjct: 380 PHLPQPPPPPPHFERQPSRRRGGGVPRSVKMQRSSSHV 417
>08_02_0406 +
16813099-16813166,16813914-16814480,16814549-16814595,
16814787-16815484
Length = 459
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 550 TPCPSTRDTHSPTPSLRLDFGPVRDLTRL---PSWKNPSPEPRGTWFHL 687
T C +T+D + P + FG V + RL +W PS WF++
Sbjct: 149 TACATTKDVNMPAGPKKTVFGCVNFMLRLEHSDAWPVPSSMVMQKWFYV 197
>06_03_0395 - 20354713-20355570
Length = 285
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 532 PATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSPEP 666
PA TP PS SP P+ L P + R+ W++PSP P
Sbjct: 232 PAAPLPTPSPSPPPCPSPPPAATLPDPP--EAARI--WRSPSPLP 272
>03_06_0331 -
33181757-33181795,33182325-33182453,33182941-33182967,
33183459-33183545,33183827-33183975,33185467-33185521,
33185596-33187584,33188705-33188782
Length = 850
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 396 PQPQGQQREDDPDHVRNIQH 455
P Q+ DDPDHV+N+ H
Sbjct: 393 PHETNQEDLDDPDHVKNLLH 412
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 360 PRGTPRPAY*GSPQPQGQQREDDPDHVRNIQ 452
P +PA GS P G R DDPD RN++
Sbjct: 95 PSSASQPAAGGSKFP-GLSRPDDPDRARNLR 124
>01_06_1607 + 38605100-38605364,38605415-38605722,38606213-38606977
Length = 445
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 529 TPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSPEPRG 672
TP++ TP P T + +L + D R+ W NP PE G
Sbjct: 390 TPSSHQPTPAPLGTTTAAAAATLPMSLAAFSD--RIWDWNNPIPEAGG 435
>01_01_0773 + 6002563-6003069,6003183-6003299,6003447-6003539
Length = 238
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 544 TPSPESSTIPVVDRTRTARARLGWRRTWR 458
TP + PV R R AR RL R WR
Sbjct: 14 TPGTRGAPAPVAPRRRVARVRLAPRCQWR 42
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 529 TPATVSSTPCPSTRDTHSPTPSLRLDFGPVRDLTRLPSWKNPSPEPRGT 675
TP T S P P+ +P PS R PS P+P P G+
Sbjct: 139 TPTTPSPPPPPTVPAAPTPRPSPPPPAAGTNGTARAPSPPVPAPAPAGS 187
>08_01_1006 -
10191817-10191822,10192449-10192745,10192826-10192975,
10194558-10195370
Length = 421
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 216 CPIPTITP*WRGLPTIEGNTARGASSPAK 130
C +P P +RG P++ T RG + PA+
Sbjct: 142 CDMPLAPPGFRGFPSLVSLTLRGVTLPAE 170
>06_01_0121 - 932334-933074,933189-933272,934602-935006
Length = 409
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 502 TRTARARLGWRRTWRA 455
TR R R+GWRR W A
Sbjct: 103 TRGGRGRVGWRRQWSA 118
>04_01_0208 + 2596110-2596928
Length = 272
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +2
Query: 482 PCSRCTRPVYHRYRAGLRRRCLPHRAHLRGIRTPPRHPCVW 604
PC RP + R+R RRR H RG R P W
Sbjct: 165 PCETEGRPGWRRWRRRWRRRRRDRPVHGRGGTGGWRRPAAW 205
>03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093
Length = 435
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 227 KSPSVPYRPSRPDGGAFPR 171
+ P+V +RP+ PDGGA P+
Sbjct: 207 RCPTVQHRPTPPDGGAPPK 225
>03_05_0266 + 22537578-22538081
Length = 167
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 463 MYVAIQAVLSLYASGLPPVSCWTPATVSSTPCPS 564
M++A+ +L++ A P + TPATVS P S
Sbjct: 1 MFLALVILLAVAAGSWQPAATSTPATVSPAPAVS 34
>03_02_0812 -
11439258-11439409,11439537-11439612,11439860-11440076,
11440150-11440350,11440673-11440872,11440955-11441075,
11441596-11441636,11441714-11441822,11442037-11442281,
11442382-11442496,11442970-11443064,11444279-11444535,
11444780-11444999,11445473-11445556
Length = 710
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 551 VEDTVAGVQHDTGGRPDAYSESTAWMATYMAGVLNVSNMIW 429
+ED V G DT + D Y++S TY A + + N W
Sbjct: 441 LEDVVLGQLKDTSVKVDRYTKSLT--PTYFAAAMYIDNSRW 479
>02_04_0107 - 19804730-19805044
Length = 104
Score = 27.9 bits (59), Expect = 8.1
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Frame = +2
Query: 455 RPPCTSPSKP-------CSRCTRPVYHRYRAGLRRRCLPHRA------HL-RGIRTPPRH 592
+PP P +P C+R + +H+ R G RRRC RA HL R R
Sbjct: 19 QPPLAPPLRPTAEATVICNRGRQGRHHQGRRGHRRRCQGRRAPSIAASHLVRRRRLVTVK 78
Query: 593 PCVWTLGRSVTLQDYPHGRIPHPSR 667
P RS +L PH R P SR
Sbjct: 79 PA--AASRSGSLPASPHHRAPCVSR 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,578,663
Number of Sequences: 37544
Number of extensions: 634707
Number of successful extensions: 2423
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2406
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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