Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0124
(919 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 135 4e-32
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 135 4e-32
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 94 2e-19
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 93 2e-19
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 89 6e-18
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 89 6e-18
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 82 5e-16
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 81 2e-15
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 79 4e-15
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 79 4e-15
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 77 3e-14
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 77 3e-14
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 74 1e-13
08_02_0657 - 19749835-19751942,19753123-19753561 73 4e-13
04_03_0179 - 12304726-12304782,12305509-12305601,12305729-123058... 67 2e-11
09_06_0271 + 21959213-21960559 65 9e-11
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147... 54 1e-07
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510... 54 2e-07
04_04_0394 + 24905501-24905673,24907824-24907868,24908412-249085... 53 3e-07
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621... 53 4e-07
06_01_0209 + 1587656-1587876,1587964-1588055,1590520-1590545,159... 50 2e-06
06_03_1386 + 29816744-29816941,29817030-29817330,29817421-298175... 49 5e-06
08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426... 48 8e-06
06_01_0065 + 549972-550770,551577-552190,552392-552544,552769-55... 48 1e-05
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 48 1e-05
06_03_1068 - 27341103-27341444,27341689-27341929,27342030-273423... 48 1e-05
06_01_0876 - 6712224-6712812,6713777-6715233 48 1e-05
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 48 1e-05
03_02_0971 - 12807981-12808094,12808949-12809053,12809236-128092... 48 1e-05
01_06_0763 + 31800556-31800618,31800659-31800802,31800859-318009... 47 2e-05
01_06_0221 - 27653591-27653724,27654270-27654473,27655216-276553... 47 2e-05
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 46 6e-05
11_06_0634 - 25685216-25685329,25685407-25685511,25685681-256857... 45 1e-04
06_03_1468 - 30354724-30354945,30359326-30359497,30359587-303597... 45 1e-04
06_01_0860 - 6514921-6515034,6515125-6515196,6515344-6515400,651... 45 1e-04
02_05_0136 + 26174965-26175849,26176965-26177030,26177124-261772... 44 2e-04
01_01_0886 - 6970112-6970225,6970357-6970473,6970567-6970635,697... 43 4e-04
01_05_0724 - 24612712-24612852,24612985-24613038,24613340-246134... 42 7e-04
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 41 0.001
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 41 0.001
05_05_0098 + 22373384-22373522,22373566-22373772,22373879-223739... 40 0.002
01_06_1310 - 36176008-36176472,36176547-36176774,36177313-361780... 40 0.002
02_01_0450 + 3234378-3234834,3235118-3235223,3235722-3235920,323... 39 0.005
01_05_0430 + 22078651-22078677,22079269-22079356,22079669-220799... 39 0.006
01_05_0429 + 22070636-22070662,22071490-22071577,22071908-220721... 39 0.006
01_01_0268 - 2214923-2215048,2215131-2215286,2215371-2215469,221... 39 0.006
05_06_0101 - 25581800-25581943,25582030-25582095,25582268-255823... 36 0.034
04_04_0171 - 23282840-23283036,23283360-23283660,23283747-232840... 36 0.045
01_01_0270 - 2225250-2225263,2225549-2225732,2225817-2225972,222... 35 0.10
01_05_0631 + 23835120-23836109,23836204-23836674 33 0.24
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 27 0.42
12_02_0277 + 16682836-16684368 32 0.56
12_02_0275 + 16662206-16663738 32 0.56
12_02_0288 + 16856922-16858046 31 1.3
05_07_0307 - 29111643-29112104,29112222-29113214 31 1.7
10_08_0965 + 21915842-21916906 30 2.2
01_06_0280 + 28129750-28129868,28130677-28131145,28133605-281338... 30 2.2
12_02_1080 - 25911521-25911922 29 3.9
05_07_0306 - 29108860-29109282,29109425-29110441 29 6.8
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 135 bits (327), Expect = 4e-32
Identities = 61/78 (78%), Positives = 72/78 (92%)
Frame = +2
Query: 509 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ 688
LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LGIAQ
Sbjct: 162 LHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQ 221
Query: 689 PKGVLLYGPSGPWKDIIS 742
PKGVLLYGP G K +++
Sbjct: 222 PKGVLLYGPPGTGKTLLA 239
Score = 76.2 bits (179), Expect = 3e-14
Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 23/108 (21%)
Frame = +3
Query: 249 RRKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVK------- 407
R+ + NL RL+AQRN LN++V L GSYVGEVVK M K KVLVK
Sbjct: 52 RQGTDNLSRLEAQRNVLNSQVITLGEELKVLHEPGSYVGEVVKVMGKSKVLVKCCVLVFV 111
Query: 408 ----------------VHPEGKFVVDLDKNVDINDVTANCRVALRNES 503
VHPEGK+VVD+DK++DI ++ + RVALRN+S
Sbjct: 112 HMSVALEIIGEDNILLVHPEGKYVVDVDKSIDITKLSPSTRVALRNDS 159
Score = 57.6 bits (133), Expect = 1e-08
Identities = 35/69 (50%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QK+IG + ++M E L
Sbjct: 217 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG-SELVQKYIG-EGSRMVRE-L 273
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 274 FVMAREHAP 282
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 190 KGEGFRPYYITKIEELQLIVAE 255
+G+G RPYY ++I +LQL + +
Sbjct: 32 RGDGLRPYYQSRIHDLQLQIRQ 53
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 135 bits (327), Expect = 4e-32
Identities = 61/78 (78%), Positives = 72/78 (92%)
Frame = +2
Query: 509 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ 688
LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LGIAQ
Sbjct: 140 LHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQ 199
Query: 689 PKGVLLYGPSGPWKDIIS 742
PKGVLLYGP G K +++
Sbjct: 200 PKGVLLYGPPGTGKTLLA 217
Score = 114 bits (275), Expect = 8e-26
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +3
Query: 249 RRKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKF 428
R+K+ NL RL+AQRN+LN++VRMLR GSYVGEVVK M K KVLVKVHPEGK+
Sbjct: 53 RQKTHNLNRLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKY 112
Query: 429 VVDLDKNVDINDVTANCRVALRNES 503
VVD+DK++DI +T + RVALRN+S
Sbjct: 113 VVDIDKSIDITKITPSTRVALRNDS 137
Score = 57.6 bits (133), Expect = 1e-08
Identities = 35/69 (50%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QK+IG + ++M E L
Sbjct: 195 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG-SELVQKYIG-EGSRMVRE-L 251
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 252 FVMAREHAP 260
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 93.9 bits (223), Expect = 2e-19
Identities = 44/86 (51%), Positives = 61/86 (70%)
Frame = +2
Query: 485 RSSQRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPEL 664
R Q L + IL ++VDP+VS+M VEK P +Y +GGLD QI+EIKE +ELP+ HPEL
Sbjct: 195 RYLQMVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPEL 254
Query: 665 FDALGIAQPKGVLLYGPSGPWKDIIS 742
++ +GI PKGV+LYG G K +++
Sbjct: 255 YEDIGIRPPKGVILYGEPGTGKTLLA 280
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIG 821
+G+R K G PG GKTLLA+AVA+ TF+R GS + QK++G
Sbjct: 258 IGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSEL---IQKYLG 305
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/75 (54%), Positives = 57/75 (76%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
IL ++VDP+VS+M VEK P +Y +GGLD QI+EIKE +ELP+ HPEL++ +GI PKG
Sbjct: 184 ILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKG 243
Query: 698 VLLYGPSGPWKDIIS 742
V+LYG G K +++
Sbjct: 244 VILYGEPGTGKTLLA 258
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIG 821
+G+R K G PG GKTLLA+AVA+ TF+R GS + QK++G
Sbjct: 236 IGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSEL---IQKYLG 283
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 88.6 bits (210), Expect = 6e-18
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI PKGV
Sbjct: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
Query: 701 LLYGPSGPWKDIIS 742
L YGP G K +++
Sbjct: 206 LCYGPPGTGKTLLA 219
Score = 44.4 bits (100), Expect = 1e-04
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
LG+ K C G PG GKTLLARAVA+ FIR GS + QK++G + A+M E
Sbjct: 197 LGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL---VQKYVG-EGARMVRE 252
Query: 849 RLFVMGQRNK 878
LF M + K
Sbjct: 253 -LFQMARSKK 261
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 88.6 bits (210), Expect = 6e-18
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI PKGV
Sbjct: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
Query: 701 LLYGPSGPWKDIIS 742
L YGP G K +++
Sbjct: 206 LCYGPPGTGKTLLA 219
Score = 44.4 bits (100), Expect = 1e-04
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
LG+ K C G PG GKTLLARAVA+ FIR GS + QK++G + A+M E
Sbjct: 197 LGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL---VQKYVG-EGARMVRE 252
Query: 849 RLFVMGQRNK 878
LF M + K
Sbjct: 253 -LFQMARSKK 261
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 82.2 bits (194), Expect = 5e-16
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = +2
Query: 503 LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 682
L + + LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI
Sbjct: 112 LTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGI 171
Query: 683 AQPKGVLLYGPSGPWKDIISSCCRSPHEVYF 775
PKGVLLYGP G K +++ S + F
Sbjct: 172 KPPKGVLLYGPPGTGKTLLARAIASNIDANF 202
Score = 37.1 bits (82), Expect = 0.020
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 351 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVAL 491
G +GEV++P+D ++ +VK ++VV VD +T+ RV L
Sbjct: 61 GQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVL 107
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR 782
+G++ K G PG GKTLLARA+A ++ F++
Sbjct: 169 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLK 204
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 80.6 bits (190), Expect = 2e-15
Identities = 40/91 (43%), Positives = 58/91 (63%)
Frame = +2
Query: 503 LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 682
L + + LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +P+LF +GI
Sbjct: 113 LTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPKLFLRVGI 172
Query: 683 AQPKGVLLYGPSGPWKDIISSCCRSPHEVYF 775
PKGVLLYGP G K +++ S + F
Sbjct: 173 KPPKGVLLYGPPGTGKTLLARAIASNIDANF 203
Score = 35.9 bits (79), Expect = 0.045
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 351 GSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVAL 491
G +GEV++P+D ++ +VK ++VV VD + A RV L
Sbjct: 62 GQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLIAGTRVVL 108
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR 782
+G++ K G PG GKTLLARA+A ++ F++
Sbjct: 170 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLK 205
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 79.4 bits (187), Expect = 4e-15
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP++ D V M V++ P Y +GGL+KQI+E+ E I LP+ H + F LGI PKGV
Sbjct: 140 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGV 199
Query: 701 LLYGPSGPWKDIISSCCRSPHEVYF 775
LLYGP G K +++ C + F
Sbjct: 200 LLYGPPGTGKTLMARACAAQTNATF 224
Score = 35.1 bits (77), Expect = 0.079
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR 782
LG+R K G PG GKTL+ARA A TF++
Sbjct: 191 LGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 226
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 79.4 bits (187), Expect = 4e-15
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP++ D V M V++ P Y +GGL+KQI+E+ E I LP+ H + F LGI PKGV
Sbjct: 143 LPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGV 202
Query: 701 LLYGPSGPWKDIISSCCRSPHEVYF 775
LLYGP G K +++ C + F
Sbjct: 203 LLYGPPGTGKTLMARACAAQTNATF 227
Score = 35.1 bits (77), Expect = 0.079
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR 782
LG+R K G PG GKTL+ARA A TF++
Sbjct: 194 LGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 229
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 76.6 bits (180), Expect = 3e-14
Identities = 38/111 (34%), Positives = 67/111 (60%)
Frame = +2
Query: 563 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
E++ + Y+ VGG+ KQ+ +I+E++ELP++HP+LF ++G+ PKG+LLYGP G K +I+
Sbjct: 202 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 261
Query: 743 SCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXF 895
+ +F +++ K+ E S++ R+A +K AP F
Sbjct: 262 RAVANETGAFFFL-INGPEIMSKLAGE--SESNLRKAFEEA-EKNAPSIIF 308
Score = 53.2 bits (122), Expect = 3e-07
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKE---------VIELPVKHPELFDALGIAQPKGVLLYG 712
V +VP+ ++E +GGL+ +E++E ++ PV+HPE F+ G++ KGVL YG
Sbjct: 474 VVEVPNVSWEDIGGLENVKRELQEPIYVLEFLQTVQYPVEHPEKFEKFGMSPSKGVLFYG 533
Query: 713 PSGPWKDIISSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFX 892
P G K +++ + + F + + L W S+ RE + + ++ AP
Sbjct: 534 PPGCGKTLLAKAIANECQANFISVKGPELLT---MWFGESEANVRE-IFDKARQSAPCVL 589
Query: 893 FF 898
FF
Sbjct: 590 FF 591
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 76.6 bits (180), Expect = 3e-14
Identities = 38/111 (34%), Positives = 67/111 (60%)
Frame = +2
Query: 563 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
E++ + Y+ VGG+ KQ+ +I+E++ELP++HP+LF ++G+ PKG+LLYGP G K +I+
Sbjct: 202 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 261
Query: 743 SCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXF 895
+ +F +++ K+ E S++ R+A +K AP F
Sbjct: 262 RAVANETGAFFFL-INGPEIMSKLAGE--SESNLRKAFEEA-EKNAPSIIF 308
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/113 (30%), Positives = 62/113 (54%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
V +VP+ ++E +GGL+ +E++E ++ PV+HPE F+ G++ KGVL YGP G K ++
Sbjct: 474 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 533
Query: 740 SSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + + F + + L W S+ RE + + ++ AP FF
Sbjct: 534 AKAIANECQANFISVKGPELLT---MWFGESEANVRE-IFDKARQSAPCVLFF 582
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 74.1 bits (174), Expect = 1e-13
Identities = 33/75 (44%), Positives = 50/75 (66%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+LP + D +SL+ + P+ TY +GG D Q +EI+E +ELP+ H EL+ +GI P+G
Sbjct: 92 VLPPEADSSISLLGSSEKPNVTYTDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRG 151
Query: 698 VLLYGPSGPWKDIIS 742
VLLYGP G K +++
Sbjct: 152 VLLYGPPGTGKTMLA 166
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKT+LA+AVAHH FIR + QK++G + +M +F + + N P
Sbjct: 156 GPPGTGKTMLAKAVAHHTTAAFIRVVG-SEFVQKYLG-EGPRM-VRDVFRLAKENAP 209
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 72.5 bits (170), Expect = 4e-13
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +2
Query: 563 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
E++ Y+ VGG+ KQ+ +I+E++ELP++HP+LF LG+ PKG+LLYGP G K +++
Sbjct: 207 ERLDGPGYDDVGGVRKQLAQIRELVELPLRHPKLFQTLGVRPPKGILLYGPPGTGKTLLA 266
Query: 743 SCCRSPHEVYF 775
+ +F
Sbjct: 267 RAIAAESGAHF 277
Score = 61.3 bits (142), Expect = 1e-09
Identities = 33/113 (29%), Positives = 60/113 (53%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
+ +VP +++ +GGL + +E++E ++ PV+HPE+FD G++ +GVL YGP G K ++
Sbjct: 480 IVEVPKVSWDDIGGLGEVKRELQETVQYPVEHPEMFDLFGMSPSRGVLFYGPPGCGKTMM 539
Query: 740 SSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + F + + L W S+ R L + ++ AP FF
Sbjct: 540 AKAIAKECKANFISIKGPELLT---MWFGESEGNVRN-LFDKARQSAPCILFF 588
Score = 33.1 bits (72), Expect = 0.32
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
LG+R K G PG GKTLLARA+A F+
Sbjct: 244 LGVRPPKGILLYGPPGTGKTLLARAIAAESGAHFV 278
>04_03_0179 -
12304726-12304782,12305509-12305601,12305729-12305833,
12306715-12306793,12307297-12307415,12307728-12307919,
12308158-12308277,12309542-12309613,12310157-12310246,
12310402-12310485
Length = 336
Score = 67.3 bits (157), Expect = 2e-11
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+ P+K+ P L+ V+ + Y +GGL+KQI+E+ E + LP+ H F LGI PKG
Sbjct: 92 VYPSKLKP-GDLIGVDSTSNEHYCGIGGLEKQIEELVEAVVLPIIHKNCFQRLGIHPPKG 150
Query: 698 VLLYGPSGPWKDIISSCCRSPHEVYF 775
VLLYGP G K +++ S F
Sbjct: 151 VLLYGPPGTGKTLVAHAFASQTNATF 176
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR 782
LG+ K G PG GKTL+A A A TF++
Sbjct: 143 LGIHPPKGVLLYGPPGTGKTLVAHAFASQTNATFLK 178
>09_06_0271 + 21959213-21960559
Length = 448
Score = 64.9 bits (151), Expect = 9e-11
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = +2
Query: 572 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
P Y+ +GG + Q +E++E +ELP+ HPELF A G+ P+GVLL+GP G K +++
Sbjct: 185 PGVAYDDIGGCEAQKREVREAVELPLTHPELFAAAGVDPPRGVLLHGPLGTGKTMLA 241
>05_04_0102 +
18013994-18014049,18014236-18014335,18014499-18014783,
18014854-18015023,18015382-18015510,18016109-18016205,
18016318-18016395,18016474-18016635,18016673-18016771
Length = 391
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/73 (31%), Positives = 44/73 (60%)
Frame = +2
Query: 557 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDI 736
+++++P +++ +GGL K++++ +E P+KH FD LGI+ +GVLL+GP G K
Sbjct: 128 VIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCSKTT 187
Query: 737 ISSCCRSPHEVYF 775
++ + F
Sbjct: 188 LAKAAAHAAQASF 200
>01_06_0192 +
27347369-27348826,27349124-27349264,27349350-27351081,
27353739-27354606,27354784-27355957
Length = 1790
Score = 54.0 bits (124), Expect = 2e-07
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
+E V GL I+ +KEV+ LP+ +PE F +LG+ P+GVLL+G G K ++
Sbjct: 643 WESVAGLSNVIQSMKEVVILPLLYPEFFSSLGLTPPRGVLLHGHPGTGKTLV 694
>04_04_0394 +
24905501-24905673,24907824-24907868,24908412-24908513,
24908700-24908799,24908963-24909247,24909318-24909487,
24909846-24909974,24910332-24910428,24910541-24910618,
24910694-24911017
Length = 500
Score = 53.2 bits (122), Expect = 3e-07
Identities = 23/73 (31%), Positives = 43/73 (58%)
Frame = +2
Query: 557 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDI 736
+ +++P +++ +GGL K++++ +E P+KH FD LGI+ +GVLL+GP G K
Sbjct: 216 VTKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCSKTT 275
Query: 737 ISSCCRSPHEVYF 775
++ + F
Sbjct: 276 LAKAAAHAAQASF 288
>11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,
6213188-6213395,6214157-6214364,6214752-6215206,
6215585-6216011,6216391-6216471,6216571-6216761,
6216855-6216998
Length = 1001
Score = 52.8 bits (121), Expect = 4e-07
Identities = 35/123 (28%), Positives = 60/123 (48%)
Frame = +2
Query: 530 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 709
KV P + ++P +E VGG + +++ E IELP K+P+ F+ +G++ P+G+L+
Sbjct: 713 KVRPSAMREVSLELPKIRWEDVGGQVRIKEQLIEAIELPQKNPKAFENMGVSPPRGLLMI 772
Query: 710 GPSGPWKDIISSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXF 889
GP G K +++ S ++ F +L K W S+ R + AP
Sbjct: 773 GPPGCSKTLMARAVASEAKLNFLA-VKGPELFSK--WVGDSEKAVRSLFAKA-RDNAPAI 828
Query: 890 XFF 898
FF
Sbjct: 829 LFF 831
Score = 37.5 bits (83), Expect = 0.015
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +2
Query: 593 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK------GVLLYGPSGPWKDIISSCCR 754
+GGL K+ KEIKE+I +K D +G+ + K G+LL GP G K +++ C
Sbjct: 405 LGGLSKESKEIKEIISFSIK-----DQIGLQRVKDNLWYRGILLSGPPGTGKTSLATSCA 459
Query: 755 SPHEVYFHTWFXDQKLVPKIYWE 823
V T +++ + Y E
Sbjct: 460 YDEGVNLFT-INGPEIISQYYGE 481
>06_01_0209 +
1587656-1587876,1587964-1588055,1590520-1590545,
1591130-1591370,1591459-1591554,1591639-1591754,
1591837-1591917,1592597-1592720,1593222-1593271,
1593735-1593825,1594386-1594421,1594502-1594602,
1594684-1594800
Length = 463
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 527 NKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVL 703
+K+ +++ +V++ P +E V GLDK + + E++ LP K +LF G+ +P +G+L
Sbjct: 171 DKLVEMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLF--TGLRRPARGLL 228
Query: 704 LYGPSGPWKDIISSCCRSPHEVYF 775
L+GP G K +++ S E F
Sbjct: 229 LFGPPGNGKTMLAKAVASESEATF 252
Score = 31.9 bits (69), Expect = 0.73
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 678 GLRNQKESYCM-GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
GLR + G PG GKT+LA+AVA TF S + K++G +A K+ L
Sbjct: 219 GLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVS-ASSLTSKWVG-EAEKL-VRTL 275
Query: 855 FVMGQRNKP 881
F++ +P
Sbjct: 276 FMVAVDRQP 284
>06_03_1386 +
29816744-29816941,29817030-29817330,29817421-29817579,
29818916-29819211,29819534-29819761
Length = 393
Score = 49.2 bits (112), Expect = 5e-06
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Frame = +2
Query: 575 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKDIISSCC 751
D ++ +GGLD + + E++ LP++ PELF + P KGVLLYGP G K +++
Sbjct: 80 DVEFDSIGGLDHVKQALYELVILPLRRPELFTFGKLLSPQKGVLLYGPPGTGKTMLAKAI 139
Query: 752 RSPHEVYF---------HTWFXD-QKLVPKIY 817
F WF D QKLV ++
Sbjct: 140 AKESGAVFINVRISNLMSKWFGDAQKLVSAVF 171
>08_02_1554 +
27841801-27842007,27842282-27842455,27842554-27842653,
27843273-27843725,27843936-27844469,27844500-27844580,
27844690-27844781,27844890-27844963,27845071-27845293,
27845429-27845522,27845607-27845761,27845899-27846129,
27846803-27847003,27847257-27847382,27847497-27847558,
27847775-27847892,27848040-27848324,27848475-27848513
Length = 1082
Score = 48.4 bits (110), Expect = 8e-06
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSG 721
+E VGGL++ + IKE +ELP K+P +F + +LLYGPSG
Sbjct: 791 WEDVGGLNEAVTIIKETLELPSKYPNIFTKAPVRLRSNILLYGPSG 836
>06_01_0065 +
549972-550770,551577-552190,552392-552544,552769-552885,
552972-553076,553269-553334,553430-553494,553577-553778,
554026-554169,554212-554340
Length = 797
Score = 48.0 bits (109), Expect = 1e-05
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 533 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 712
V P + +PD T++ VGGLD KE I +K PE + G+ G LL+G
Sbjct: 477 VQPSLRREGFSSIPDVTWDDVGGLDSLRKEFDRYIIRCIKQPEEYKTFGLNMQAGFLLFG 536
Query: 713 PSGPWKDIIS 742
P G K +I+
Sbjct: 537 PPGCGKTLIA 546
Score = 41.5 bits (93), Expect = 0.001
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 678 GLRNQKESYCMGLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWYQKFIGRKAAKMGAER 851
GL Q G PG GKTL+A+AVAH F I+G + N K++G +++ +
Sbjct: 525 GLNMQAGFLLFGPPGCGKTLIAKAVAHEAGANFIHIKGPELLN---KYVGESESEV--RK 579
Query: 852 LFVMGQRNKPPSFXFSXAE 908
+F+ Q N P F +
Sbjct: 580 IFIRAQTNTPCILFFDEVD 598
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+ +GG++ I+++ + +P+ HPE+ LG+ G+LL+GP G K ++ +
Sbjct: 189 TFSDLGGMESVIEQLMMEVVVPLCHPEVPRWLGVKPVAGLLLHGPPGCGKTTLAHAIANE 248
Query: 761 HEVYFH 778
V F+
Sbjct: 249 TGVPFY 254
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKDIIS 742
T+E +G L+ + +KE++ LP++ PELF + +P KG+LL+GP G K +++
Sbjct: 715 TFEDIGALENVKETLKELVMLPLQRPELFSKGQLMKPCKGILLFGPPGTGKTMLA 769
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFI 779
G PG GKT+LA+AVA FI
Sbjct: 759 GPPGTGKTMLAKAVATEAGANFI 781
>06_03_1068 -
27341103-27341444,27341689-27341929,27342030-27342343,
27342672-27343805
Length = 676
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GP G K +++
Sbjct: 212 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 264
Score = 33.1 bits (72), Expect = 0.32
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
+G R K +G PG GKTLLA+A+A F S + + F+G A+++ L
Sbjct: 242 VGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISG-SEFVEMFVGVGASRV--RDL 298
Query: 855 FVMGQRNKP 881
F + N P
Sbjct: 299 FKKAKENAP 307
>06_01_0876 - 6712224-6712812,6713777-6715233
Length = 681
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/54 (38%), Positives = 36/54 (66%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
T++ V G+D+ ++ +E+++ +K PE F A+G PKGVLL GP G K +++
Sbjct: 214 TFDDVAGVDEAKQDFQEIVQF-LKFPEKFTAVGARTPKGVLLVGPPGTGKTLLA 266
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKM 839
+G R K +G PG GKTLLA+A+A F S + + F+G A+++
Sbjct: 244 VGARTPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSG-SEFIEMFVGVGASRV 297
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
KVP+ +E VGGL++ K I + I+LP+ + LF + + + GVLLYGP G K +++
Sbjct: 650 KVPNVKWEDVGGLEEVKKVILDTIQLPLLYKHLFSS-KLGKRSGVLLYGPPGTGKTLLA 707
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
G PG GKTLLA+AVA F ++G + N Y
Sbjct: 697 GPPGTGKTLLAKAVATECSLNFLSVKGPELINMY 730
>03_02_0971 -
12807981-12808094,12808949-12809053,12809236-12809295,
12809399-12809537,12809648-12809832,12809926-12810009,
12810093-12810215,12810617-12810796,12811017-12811092,
12811178-12811277,12811355-12811430,12812155-12812244,
12812342-12812449,12813583-12813651,12813751-12813921,
12814002-12814072,12814263-12814360,12814659-12814719,
12814935-12814971,12815217-12815308,12815428-12815549,
12816281-12816414
Length = 764
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKDIIS 742
T+E +G L+ + +KE++ LP++ PELF + +P KG+LL+GP G K +++
Sbjct: 460 TFEDIGALESVKETLKELVMLPLQRPELFSRGQLMKPCKGILLFGPPGTGKTMLA 514
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFI 779
G PG GKT+LA+AVA FI
Sbjct: 504 GPPGTGKTMLAKAVATEAGANFI 526
>01_06_0763 +
31800556-31800618,31800659-31800802,31800859-31800980,
31801742-31801807,31801891-31801998,31802226-31802292,
31802716-31802800,31803169-31803329,31803490-31803591,
31803807-31804029,31804155-31804300
Length = 428
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/57 (35%), Positives = 37/57 (64%)
Frame = +2
Query: 572 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
PD +E + GL+ + +KE + +P+K+P+ F L ++ KG+LL+GP G K +++
Sbjct: 139 PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLA 194
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIR---GSXIRNW 803
G PG GKT+LA+AVA + TF S + W
Sbjct: 184 GPPGTGKTMLAKAVATECKTTFFNISASSIVSKW 217
>01_06_0221 -
27653591-27653724,27654270-27654473,27655216-27655315,
27655728-27655888,27656846-27656930,27657548-27657614,
27658434-27658541,27658639-27658704,27659341-27659387,
27659497-27659691,27659833-27659877
Length = 403
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/57 (35%), Positives = 37/57 (64%)
Frame = +2
Query: 572 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
PD +E + GL+ + +KE + +P+K+P+ F L ++ KG+LL+GP G K +++
Sbjct: 125 PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFKGL-LSPWKGILLFGPPGTGKTMLA 180
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIR---GSXIRNW 803
G PG GKT+LA+AVA + TF S + W
Sbjct: 170 GPPGTGKTMLAKAVATECKTTFFNISASSIVSKW 203
>09_04_0727 +
19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 45.6 bits (103), Expect = 6e-05
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ +GGL I +KE++ P+ +P+ F I P+GVLL GP G K +I+
Sbjct: 383 SFNDIGGLSDYIDALKEMVFFPLLYPDFFANYHITPPRGVLLCGPPGTGKTLIA 436
>11_06_0634 - 25685216-25685329,25685407-25685511,25685681-25685740,
25685827-25685965,25686056-25686240,25686328-25686411,
25686499-25686621,25687088-25687267,25687364-25687433,
25687520-25687616,25687695-25687770,25688259-25688348,
25688383-25688529,25688647-25688715,25689004-25689177,
25689266-25689336,25689409-25689557,25690723-25690774,
25690865-25691120,25691196-25691287,25691420-25691541,
25691909-25692679,25692883-25692940,25693068-25693107,
25694462-25694595,25694685-25694793,25694896-25694991
Length = 1220
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKDIIS 742
T++ +G L+ +KE++ LP++ PELF + +P KG+LL+GP G K +++
Sbjct: 916 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 970
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFI 779
G PG GKT+LA+AVA FI
Sbjct: 960 GPPGTGKTMLAKAVATEAGANFI 982
>06_03_1468 -
30354724-30354945,30359326-30359497,30359587-30359770,
30359865-30360111,30360817-30362052
Length = 686
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +2
Query: 563 EKVPDS--TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDI 736
++VP++ T+ V G D+ E++EV++ +K+P+ + ALG PKG LL GP G K +
Sbjct: 222 QEVPETGVTFVDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 280
Query: 737 IS 742
++
Sbjct: 281 LA 282
Score = 32.3 bits (70), Expect = 0.56
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKM 839
LG + K +G PG GKTLLARAVA F + + F+G A+++
Sbjct: 260 LGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFF-SCAASEFVELFVGVGASRV 313
>06_01_0860 -
6514921-6515034,6515125-6515196,6515344-6515400,
6515512-6515650,6515737-6515921,6516043-6516126,
6516552-6516674,6518043-6518219,6518331-6518400,
6518478-6518574,6519022-6519097,6519240-6519329,
6519548-6519655,6520715-6520756,6520854-6521045,
6521239-6521309,6521396-6521550,6521999-6522064,
6522769-6522820,6523476-6523566,6523897-6524094,
6524173-6524267,6524361-6524485,6524586-6525016
Length = 969
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKDIIS 742
++ +G L+ K + E++ LP++ PELF + +P KG+LL+GP G K +++
Sbjct: 678 FDDIGALEDVKKTLDELVTLPMRRPELFSHGNLLRPCKGILLFGPPGTGKTLLA 731
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 681 LRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
LR K G PG GKTLLA+A+A FI
Sbjct: 711 LRPCKGILLFGPPGTGKTLLAKALATEAGANFI 743
>02_05_0136 +
26174965-26175849,26176965-26177030,26177124-26177258,
26177369-26177434,26177516-26177701,26177777-26177863,
26177985-26178098,26178174-26178298,26178375-26178483,
26179298-26179423,26179511-26179831,26180146-26180269,
26180405-26180529
Length = 822
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+ V G+D+ +E++E++E +++PE + LG P+GVLL G G K +++
Sbjct: 344 TFADVAGVDEAKEELEEIVEF-LRNPERYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 402
Query: 761 HEVYF 775
EV F
Sbjct: 403 AEVPF 407
Score = 39.5 bits (88), Expect = 0.004
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG R + +GLPG GKTLLA+AVA FI S + + ++G AA++ L
Sbjct: 374 LGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCS-ASEFVELYVGMGAARV--RDL 430
Query: 855 FVMGQRNKP 881
F ++ P
Sbjct: 431 FARAKKESP 439
>01_01_0886 -
6970112-6970225,6970357-6970473,6970567-6970635,
6970711-6970849,6970964-6971532,6971799-6971966,
6972097-6972184,6972260-6972818,6972924-6973024,
6973113-6973155,6973845-6973938,6974160-6974215,
6974460-6974581,6975306-6975517
Length = 816
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKDIISSCCRS 757
T++ +G L + ++E++ LP++ P+LF G+ +P +G+LL+GP G K +++ +
Sbjct: 506 TFDDIGALSDIKESLQELVMLPLRRPDLFKG-GLLKPCRGILLFGPPGTGKTMLAKAIAN 564
Query: 758 PHEVYF 775
+ F
Sbjct: 565 EAQASF 570
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGS 788
G PG GKT+LA+A+A+ + +FI S
Sbjct: 549 GPPGTGKTMLAKAIANEAQASFINVS 574
>01_05_0724 -
24612712-24612852,24612985-24613038,24613340-24613429,
24613499-24613780,24613926-24614119,24614379-24614508,
24614610-24614690,24614766-24614891,24615019-24615076,
24615319-24615380,24615753-24615803,24615946-24616065,
24616280-24616403,24616832-24616920,24617304-24617396,
24617910-24618063,24618673-24619178
Length = 784
Score = 41.9 bits (94), Expect = 7e-04
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
T++ V G D KE++EV+E +K+P F LG PKG+LL G G K +++
Sbjct: 326 TFKDVKGCDDAKKELEEVVEY-LKNPSKFTRLGGKLPKGILLTGSPGTGKTLLA 378
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG + K G PG GKTLLA+A+A F + + + F+G A ++ R
Sbjct: 356 LGGKLPKGILLTGSPGTGKTLLAKAIAGEAGVPFFYRAG-SEFEEMFVGVGARRV---RS 411
Query: 855 FVMGQRNKPPSFXF 896
+ K P F
Sbjct: 412 LFQAAKKKAPCIVF 425
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKDIIS 742
T++ +G L + ++E++ LP++ P+LF G+ +P +G+LL+GP G K +++
Sbjct: 499 TFDDIGALADIKESLQELVMLPLRRPDLFKG-GLLKPCRGILLFGPPGTGKTMLA 552
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGS 788
G PG GKT+LA+A+A+ +FI S
Sbjct: 542 GPPGTGKTMLAKAIANDAGASFINVS 567
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +2
Query: 581 TYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKDIISSCCR 754
T++ +G L IKE + E++ LP++ P+ F G+ +P KGVLL+GP G K +++
Sbjct: 467 TFDDIGAL-ADIKECLHELVMLPLQRPDFFKG-GLLKPCKGVLLFGPPGTGKTMLAKALA 524
Query: 755 SPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXF 895
+ F + K Y G C +AL + K AP F
Sbjct: 525 NAAGASFLN-ISMASMTSKWY---GESEKCIQALFSLAAKLAPAIIF 567
>05_05_0098 +
22373384-22373522,22373566-22373772,22373879-22373953,
22374611-22374744,22375189-22375674,22375854-22376621,
22377367-22377594,22378294-22378773
Length = 838
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSPH 763
++ V G D+ +EI E + +K+P+ ++ LG PKG LL GP G K +++
Sbjct: 350 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 408
Query: 764 EVYF 775
V F
Sbjct: 409 GVPF 412
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIG 821
LG + K + +G PG GKTLLA+A A F+ S ++ + F+G
Sbjct: 379 LGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISG-SDFMEMFVG 426
>01_06_1310 -
36176008-36176472,36176547-36176774,36177313-36178080,
36178250-36178732,36179883-36180010,36180539-36180607,
36180688-36180892,36181005-36181067
Length = 802
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSPH 763
++ V G D+ +EI E + +K+P+ ++ LG PKG LL GP G K +++
Sbjct: 319 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES 377
Query: 764 EVYF 775
V F
Sbjct: 378 GVPF 381
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIG 821
LG + K + +G PG GKTLLA+A A F+ S ++ + F+G
Sbjct: 348 LGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISG-SDFMEMFVG 395
>02_01_0450 +
3234378-3234834,3235118-3235223,3235722-3235920,
3236119-3236187,3236299-3236373,3236484-3236582,
3236694-3236864,3237394-3237519
Length = 433
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKD 733
+V + P+ + V GLD + ++E + LPV+ P+ F G +P K LLYGP G K
Sbjct: 115 IVSEKPNVRWSDVSGLDGAKQALQEAVVLPVEFPQFF--TGKRKPWKAFLLYGPPGTGKS 172
Query: 734 IIS 742
++
Sbjct: 173 YLA 175
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GK+ LA+AVA TF S + K++G ++ K+ LF M + N P
Sbjct: 165 GPPGTGKSYLAKAVATEADSTFFSISS-SDLLSKWMG-ESEKL-VTNLFQMARENAP 218
>01_05_0430 +
22078651-22078677,22079269-22079356,22079669-22079929,
22080693-22080950,22081036-22081160,22082375-22082851,
22082937-22083848
Length = 715
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +2
Query: 575 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ + V G+D+ E++E++ ++ P+ F LG PKGVLL GP G K +++
Sbjct: 226 NTKFSDVKGVDEAKAELEEIVHY-LRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLA 280
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG + K +G PG GKT+LARA+A F S + + F+G A ++ L
Sbjct: 258 LGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSG-SEFEEMFVGVGARRV--RDL 314
Query: 855 FVMGQRNKP 881
F ++ P
Sbjct: 315 FAAAKKRSP 323
>01_05_0429 +
22070636-22070662,22071490-22071577,22071908-22072168,
22072925-22073161,22073251-22073375,22074093-22074569,
22074655-22075569
Length = 709
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 560 VEKVPDST--YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKD 733
V+ + DS + V G+D+ E++E++ ++ P+ F LG PKGVLL GP G K
Sbjct: 212 VQPIMDSKTKFSDVKGVDEAKAELEEIVHY-LRDPKRFTHLGGKLPKGVLLVGPPGTGKT 270
Query: 734 IIS 742
+++
Sbjct: 271 MLA 273
Score = 31.5 bits (68), Expect = 0.97
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG + K +G PG GKT+LARAVA F S + + F+G A ++ L
Sbjct: 251 LGGKLPKGVLLVGPPGTGKTMLARAVAGEAGVPFFSCSG-SEFEEMFVGVGARRV--RDL 307
Query: 855 FVMGQRNKP 881
F ++ P
Sbjct: 308 FAAAKKRSP 316
>01_01_0268 -
2214923-2215048,2215131-2215286,2215371-2215469,
2215557-2215631,2215732-2215800,2216515-2216713,
2220162-2220267,2221117-2221588
Length = 433
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 542 LVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPS 718
L S ++ EK P+ + V GL+ + ++E + LPVK P+ F G +P + LLYGP
Sbjct: 116 LNSAIITEK-PNIKWNDVAGLESAKQALQEAVILPVKFPQFF--TGKRRPWRAFLLYGPP 172
Query: 719 GPWKDIIS 742
G K ++
Sbjct: 173 GTGKSYLA 180
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GK+ LA+AVA TF S + K++G ++ K+ A LF M + N P
Sbjct: 170 GPPGTGKSYLAKAVATEADSTFFSISS-SDLVSKWMG-ESEKLVA-NLFQMARENAP 223
>05_06_0101 -
25581800-25581943,25582030-25582095,25582268-25582390,
25582635-25582722,25582823-25582920,25583088-25583147,
25583228-25583288,25583374-25583505,25583957-25584167,
25584515-25584648,25584907-25584989,25585077-25585142,
25585552-25585607,25585701-25585800,25586313-25586421,
25586499-25586653,25586767-25586937,25587129-25587212,
25587261-25587345,25587431-25587477,25587912-25588124
Length = 761
Score = 36.3 bits (80), Expect = 0.034
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 593 VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
+GGL + +I + V P + + LGI KG+LLYGP G K +++
Sbjct: 225 IGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMA 275
>04_04_0171 -
23282840-23283036,23283360-23283660,23283747-23284070,
23284678-23284698,23284877-23285788
Length = 584
Score = 35.9 bits (79), Expect = 0.045
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKM 839
LG + + +G PG GKTLLARAVA F S + + F+GR AA++
Sbjct: 325 LGAKLPRGVLLVGPPGTGKTLLARAVAGEAGIPFFSVS-ASEFVEVFVGRGAARV 378
Score = 31.5 bits (68), Expect = 0.97
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVK-----HPEL-FDALGIAQPKGVLLYGPSGPWKDIIS 742
++ V G+D+ +E+ E+ L ++ H L + LG P+GVLL GP G K +++
Sbjct: 289 FDDVQGVDEAKEELVEISRLIIEVVSCLHGSLNYKKLGAKLPRGVLLVGPPGTGKTLLA 347
>01_01_0270 -
2225250-2225263,2225549-2225732,2225817-2225972,
2226276-2226374,2226489-2226563,2226682-2226750,
2226917-2227115,2227492-2227597,2228118-2228526
Length = 436
Score = 34.7 bits (76), Expect = 0.10
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKD 733
+V P + V GL+ + ++E LP+K P F G P K LLYGP G K
Sbjct: 99 IVAAKPSVKWSDVAGLESAKEALQEAAILPIKFPHFF--TGKRSPWKAFLLYGPPGTGKS 156
Query: 734 IIS 742
++
Sbjct: 157 YLA 159
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 678 GLRNQKESYCM-GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
G R+ +++ + G PG GK+ LA AVA + TF S + K++G ++ K+ A L
Sbjct: 137 GKRSPWKAFLLYGPPGTGKSYLAEAVATEVDSTFFSISS-SDLVSKWMG-ESEKLVA-NL 193
Query: 855 FVMGQRNKP 881
F M + N P
Sbjct: 194 FQMARENAP 202
>01_05_0631 + 23835120-23836109,23836204-23836674
Length = 486
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 578 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWK 730
ST+ + KQ + + + +E +K E + +G A +G LLYGP G K
Sbjct: 209 STFTTLAMDHKQKQSVMDDLERFIKRKEYYKKIGKAWKRGYLLYGPPGTGK 259
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 27.1 bits (57), Expect(2) = 0.42
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELF 667
++ +G L+ + + E++ LP++ PELF
Sbjct: 655 FDDIGALEDVKRTLDELVTLPMRRPELF 682
Score = 24.2 bits (50), Expect(2) = 0.42
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 692 KGVLLYGPSGPWKDIIS 742
KGVLL+GP G K +++
Sbjct: 720 KGVLLFGPPGTGKTLLA 736
>12_02_0277 + 16682836-16684368
Length = 510
Score = 32.3 bits (70), Expect = 0.56
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 473 QLSCRSSQRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVK 652
+L+ + QR L+ + ++ S V P ST++M+ + EI + + K
Sbjct: 174 ELTAKDRQRLLFTNHSKQGEISMWTS---VPYNPPSTFDMLAMDHAKKVEIMDDLRAFQK 230
Query: 653 HPELFDALGIAQPKGVLLYGPSGPWK 730
E +G A +G LLYGP G K
Sbjct: 231 GKEYHSKVGKAWKRGYLLYGPPGTGK 256
>12_02_0275 + 16662206-16663738
Length = 510
Score = 32.3 bits (70), Expect = 0.56
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 473 QLSCRSSQRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVK 652
+L+ + QR L+ + ++ S V P ST++M+ + EI + + K
Sbjct: 174 ELTAKDRQRLLFTNHSKQGEISMWTS---VPYNPPSTFDMLAMDHAKKVEIMDDLRAFQK 230
Query: 653 HPELFDALGIAQPKGVLLYGPSGPWK 730
E +G A +G LLYGP G K
Sbjct: 231 GKEYHSKVGKAWKRGYLLYGPPGTGK 256
>12_02_0288 + 16856922-16858046
Length = 374
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +2
Query: 476 LSCRSSQRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKH 655
L+ ++ QR+LY H N + + T M G + E+ E +++ K
Sbjct: 86 LTAKNRQRRLYTHH--ENHMSTWTHVPWKHPATFDTLAMDPG---KKDELIEDLKMFQKG 140
Query: 656 PELFDALGIAQPKGVLLYGPSGPWK 730
E +G A +G LLYGPSG K
Sbjct: 141 KEYHSKVGKAWKRGYLLYGPSGTGK 165
>05_07_0307 - 29111643-29112104,29112222-29113214
Length = 484
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 578 STYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWK 730
ST++ + +D+++K+ I + ++ +K + + +G A +G LLYGP G K
Sbjct: 205 STFDTLA-MDQKLKQSIIDDLDRFIKRKDYYKRIGKAWKRGYLLYGPPGTGK 255
>10_08_0965 + 21915842-21916906
Length = 354
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +1
Query: 328 SFSSCKNRDRTSEKWLNQWIKRRSS*KFILKVNSSSI 438
SFSS ++++R S +W ++W R SS ++ + ++ ++
Sbjct: 275 SFSSARSQERWSNRWSSRWSSRWSSGRWSSRYDAGTV 311
>01_06_0280 +
28129750-28129868,28130677-28131145,28133605-28133802,
28134168-28134412,28134749-28134907,28135491-28135578,
28135983-28136264
Length = 519
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 678 GLRNQKESYCM-GLPGPGKTLLARAVAHHMRCTFIRGS 788
G+R + M G PG GKTLLA+AVA TF S
Sbjct: 263 GIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS 300
>12_02_1080 - 25911521-25911922
Length = 133
Score = 29.5 bits (63), Expect = 3.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 226 SWLCSTGENPHPSPCPLPF 170
+W+CS GE+P P P+P+
Sbjct: 18 TWICSGGESPRPLLIPVPY 36
>05_07_0306 - 29108860-29109282,29109425-29110441
Length = 479
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 578 STYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWK 730
ST++ + +D +K + +E VK + + +G A +G LLYGP G K
Sbjct: 213 STFDTLA-MDHSLKHSVMYDLERFVKRKDYYRRIGRAWKRGYLLYGPPGTGK 263
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,487,570
Number of Sequences: 37544
Number of extensions: 446576
Number of successful extensions: 1444
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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