Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0124
(919 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 149 2e-35
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 149 2e-35
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 149 2e-35
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 149 2e-35
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 149 2e-35
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 135 2e-31
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 94 6e-19
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 94 6e-19
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 94 6e-19
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 94 6e-19
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 94 6e-19
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 94 6e-19
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 94 6e-19
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 94 6e-19
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 90 9e-18
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 90 9e-18
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 90 9e-18
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 90 9e-18
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 84 6e-16
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 84 6e-16
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 84 6e-16
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 84 6e-16
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 84 6e-16
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 82 2e-15
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 82 2e-15
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 82 2e-15
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 82 2e-15
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 82 2e-15
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 82 2e-15
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 82 2e-15
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 77 1e-13
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 77 1e-13
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 77 1e-13
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 77 1e-13
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 75 5e-13
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 75 5e-13
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 75 5e-13
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 75 5e-13
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 75 5e-13
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 75 5e-13
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 75 5e-13
U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein. 71 6e-12
BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome, ma... 71 6e-12
BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome, ma... 71 6e-12
BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome, ma... 71 6e-12
BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome, ma... 71 6e-12
AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo sa... 71 6e-12
AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein. 71 8e-12
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 61 6e-09
AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing prot... 61 6e-09
AB208906-1|BAD92143.1| 836|Homo sapiens peroxisomal biogenesis ... 56 2e-07
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 54 5e-07
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 54 5e-07
U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein. 53 2e-06
D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly facto... 53 2e-06
BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis ... 53 2e-06
AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis ... 53 2e-06
AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly fac... 53 2e-06
AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein. 53 2e-06
AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein. 53 2e-06
BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis f... 52 3e-06
AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis g... 52 3e-06
AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis d... 52 3e-06
AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein. 52 3e-06
AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein. 52 3e-06
AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein. 52 3e-06
BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA doma... 52 4e-06
BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein. 52 4e-06
AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein. 52 4e-06
AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens ... 52 4e-06
AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens ... 51 5e-06
U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein ... 50 9e-06
U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein ... 50 9e-06
BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein. 50 9e-06
BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein. 50 2e-05
BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein. 50 2e-05
BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein. 50 2e-05
BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein. 50 2e-05
AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA doma... 50 2e-05
AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens ... 50 2e-05
AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens ... 50 2e-05
AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein. 50 2e-05
BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 49 2e-05
BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 49 2e-05
BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S. cerevis... 49 2e-05
AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein. 49 2e-05
AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 49 2e-05
AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S. cerevis... 49 2e-05
AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 49 2e-05
AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S. cerevis... 49 2e-05
AJ295618-1|CAB99462.1| 517|Homo sapiens putative ATPases protein. 49 2e-05
AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent metallopr... 49 2e-05
AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent metallopr... 49 2e-05
AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein. 49 2e-05
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 48 4e-05
BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-l... 44 6e-04
U03985-1|AAA17411.1| 751|Homo sapiens protein ( Human N-ethylma... 44 0.001
AF135168-1|AAF70545.1| 744|Homo sapiens N-ethylmaleimide-sensit... 44 0.001
AF102846-1|AAF04745.2| 744|Homo sapiens N-ethylmaleimide-sensit... 44 0.001
BC030613-1|AAH30613.1| 744|Homo sapiens N-ethylmaleimide-sensit... 43 0.002
AC000064-1|AAB46346.1| 541|Homo sapiens WUGSC:H_RG083M05.1 prot... 43 0.002
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 42 0.002
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 42 0.002
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 42 0.002
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 42 0.002
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 42 0.002
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 42 0.002
BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein. 41 0.005
AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein. 41 0.005
AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein. 41 0.005
AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein. 41 0.005
AK001267-1|BAA91590.1| 639|Homo sapiens protein ( Homo sapiens ... 41 0.007
AC093727-1|AAX81992.1| 639|Homo sapiens unknown protein. 41 0.007
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 40 0.010
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 40 0.010
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 40 0.010
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 40 0.010
Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein. 40 0.013
BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (p... 40 0.013
BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein. 40 0.013
AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein. 40 0.013
BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60 (ATPase-con... 38 0.051
BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60 (ATPase-con... 38 0.051
AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60 (ATPase-con... 38 0.051
AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60 (ATPase-con... 38 0.051
AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein. 38 0.051
Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein p... 38 0.067
BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene... 38 0.067
BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase ... 38 0.067
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 37 0.089
BX276089-1|CAI16432.1| 311|Homo sapiens katanin p60 (ATPase-con... 34 0.83
BC050428-1|AAH50428.1| 311|Homo sapiens KATNA1 protein protein. 34 0.83
AL078581-1|CAI19504.1| 311|Homo sapiens katanin p60 (ATPase-con... 34 0.83
AK023411-1|BAB14567.1| 254|Homo sapiens protein ( Homo sapiens ... 34 0.83
AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein. 32 3.4
BC125201-1|AAI25202.1| 891|Homo sapiens SLFN5 protein protein. 31 4.4
BC125200-1|AAI25201.1| 891|Homo sapiens schlafen family member ... 31 4.4
BC052586-1|AAH52586.1| 901|Homo sapiens schlafen family member ... 31 4.4
BC021245-1|AAH21245.2| 122|Homo sapiens AFG3L1 protein protein. 31 4.4
AL831964-1|CAD38606.2| 901|Homo sapiens hypothetical protein pr... 31 4.4
AK127728-1|BAC87104.1| 639|Homo sapiens lucosaminyltransferase ... 31 4.4
AK092241-1|BAC03835.1| 901|Homo sapiens protein ( Homo sapiens ... 31 4.4
AK074184-1|BAB85010.1| 820|Homo sapiens FLJ00257 protein protein. 31 4.4
AK056514-1|BAB71201.1| 579|Homo sapiens protein ( Homo sapiens ... 31 4.4
AK054668-1|BAB70788.1| 782|Homo sapiens protein ( Homo sapiens ... 31 4.4
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 149 bits (360), Expect = 2e-35
Identities = 72/90 (80%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Frame = +2
Query: 479 SCRSSQRK--LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVK 652
+CR + R LHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLDKQIKEIKEVIELPVK
Sbjct: 111 NCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVK 170
Query: 653 HPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
HPELF+ALGIAQPKGVLLYGP G K +++
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Score = 139 bits (337), Expect = 1e-32
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = +3
Query: 255 KSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVV 434
KSQNLRRLQAQRNELNAKVR+LR GSYVGEVV+ MDKKKVLVKVHPEGKFVV
Sbjct: 38 KSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVV 97
Query: 435 DLDKNVDINDVTANCRVALRNES 503
D+DKN+DINDVT NCRVALRN+S
Sbjct: 98 DVDKNIDINDVTPNCRVALRNDS 120
Score = 60.1 bits (139), Expect = 1e-08
Identities = 37/69 (53%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QKFIG + A+M E L
Sbjct: 178 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG-SELVQKFIG-EGARMVRE-L 234
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 235 FVMAREHAP 243
Score = 35.1 bits (77), Expect = 0.36
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 169 KMEVDTVK-GEGFRPYYITKIEELQLIV 249
+ME++ K G G R YY++KIEELQLIV
Sbjct: 8 QMELEEGKAGSGLRQYYLSKIEELQLIV 35
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 149 bits (360), Expect = 2e-35
Identities = 72/90 (80%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Frame = +2
Query: 479 SCRSSQRK--LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVK 652
+CR + R LHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLDKQIKEIKEVIELPVK
Sbjct: 111 NCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVK 170
Query: 653 HPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
HPELF+ALGIAQPKGVLLYGP G K +++
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Score = 139 bits (337), Expect = 1e-32
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = +3
Query: 255 KSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVV 434
KSQNLRRLQAQRNELNAKVR+LR GSYVGEVV+ MDKKKVLVKVHPEGKFVV
Sbjct: 38 KSQNLRRLQAQRNELNAKVRLLRRELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVV 97
Query: 435 DLDKNVDINDVTANCRVALRNES 503
D+DKN+DINDVT NCRVALRN+S
Sbjct: 98 DVDKNIDINDVTPNCRVALRNDS 120
Score = 60.1 bits (139), Expect = 1e-08
Identities = 37/69 (53%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QKFIG + A+M E L
Sbjct: 178 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG-SELVQKFIG-EGARMVRE-L 234
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 235 FVMAREHAP 243
Score = 35.1 bits (77), Expect = 0.36
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 169 KMEVDTVK-GEGFRPYYITKIEELQLIV 249
+ME++ K G G R YY++KIEELQLIV
Sbjct: 8 QMELEEGKAGSGLRQYYLSKIEELQLIV 35
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 149 bits (360), Expect = 2e-35
Identities = 72/90 (80%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Frame = +2
Query: 479 SCRSSQRK--LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVK 652
+CR + R LHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLDKQIKEIKEVIELPVK
Sbjct: 111 NCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVK 170
Query: 653 HPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
HPELF+ALGIAQPKGVLLYGP G K +++
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Score = 139 bits (337), Expect = 1e-32
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = +3
Query: 255 KSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVV 434
KSQNLRRLQAQRNELNAKVR+LR GSYVGEVV+ MDKKKVLVKVHPEGKFVV
Sbjct: 38 KSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVV 97
Query: 435 DLDKNVDINDVTANCRVALRNES 503
D+DKN+DINDVT NCRVALRN+S
Sbjct: 98 DVDKNIDINDVTPNCRVALRNDS 120
Score = 60.1 bits (139), Expect = 1e-08
Identities = 37/69 (53%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QKFIG + A+M E L
Sbjct: 178 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG-SELVQKFIG-EGARMVRE-L 234
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 235 FVMAREHAP 243
Score = 35.1 bits (77), Expect = 0.36
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 169 KMEVDTVK-GEGFRPYYITKIEELQLIV 249
+ME++ K G G R YY++KIEELQLIV
Sbjct: 8 QMELEEGKAGSGLRQYYLSKIEELQLIV 35
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 149 bits (360), Expect = 2e-35
Identities = 72/90 (80%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Frame = +2
Query: 479 SCRSSQRK--LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVK 652
+CR + R LHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLDKQIKEIKEVIELPVK
Sbjct: 111 NCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVK 170
Query: 653 HPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
HPELF+ALGIAQPKGVLLYGP G K +++
Sbjct: 171 HPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Score = 139 bits (337), Expect = 1e-32
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = +3
Query: 255 KSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVV 434
KSQNLRRLQAQRNELNAKVR+LR GSYVGEVV+ MDKKKVLVKVHPEGKFVV
Sbjct: 38 KSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVV 97
Query: 435 DLDKNVDINDVTANCRVALRNES 503
D+DKN+DINDVT NCRVALRN+S
Sbjct: 98 DVDKNIDINDVTPNCRVALRNDS 120
Score = 60.1 bits (139), Expect = 1e-08
Identities = 37/69 (53%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QKFIG + A+M E L
Sbjct: 178 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG-SELVQKFIG-EGARMVRE-L 234
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 235 FVMAREHAP 243
Score = 35.1 bits (77), Expect = 0.36
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 169 KMEVDTVK-GEGFRPYYITKIEELQLIV 249
+ME++ K G G R YY++KIEELQLIV
Sbjct: 8 QMELEEGKAGSGLRQYYLSKIEELQLIV 35
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 149 bits (360), Expect = 2e-35
Identities = 72/90 (80%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Frame = +2
Query: 479 SCRSSQRK--LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVK 652
+CR + R LHKILPNKVDPLVSLMMVEKVPDSTYEM+GGLDKQIKEIKEVIELPVK
Sbjct: 107 NCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVK 166
Query: 653 HPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
HPELF+ALGIAQPKGVLLYGP G K +++
Sbjct: 167 HPELFEALGIAQPKGVLLYGPPGTGKTLLA 196
Score = 139 bits (337), Expect = 1e-32
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = +3
Query: 255 KSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVV 434
KSQNLRRLQAQRNELNAKVR+LR GSYVGEVV+ MDKKKVLVKVHPEGKFVV
Sbjct: 34 KSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVV 93
Query: 435 DLDKNVDINDVTANCRVALRNES 503
D+DKN+DINDVT NCRVALRN+S
Sbjct: 94 DVDKNIDINDVTPNCRVALRNDS 116
Score = 60.1 bits (139), Expect = 1e-08
Identities = 37/69 (53%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QKFIG + A+M E L
Sbjct: 174 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG-SELVQKFIG-EGARMVRE-L 230
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 231 FVMAREHAP 239
Score = 35.1 bits (77), Expect = 0.36
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 169 KMEVDTVK-GEGFRPYYITKIEELQLIV 249
+ME++ K G G R YY++KIEELQLIV
Sbjct: 4 EMELEEGKAGSGLRQYYLSKIEELQLIV 31
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 135 bits (327), Expect = 2e-31
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = +2
Query: 527 NKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 706
NKVDPLVSLMMVEKVPDSTYEM+GGLDKQIKEIKEVIELPVKHPELF+ALGIAQPKGVLL
Sbjct: 3 NKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLL 62
Query: 707 YGPSGPWKDIIS 742
YGP G K +++
Sbjct: 63 YGPPGTGKTLLA 74
Score = 60.1 bits (139), Expect = 1e-08
Identities = 37/69 (53%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QKFIG + A+M E L
Sbjct: 52 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG-SELVQKFIG-EGARMVRE-L 108
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 109 FVMAREHAP 117
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 94.3 bits (224), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+L + DPLV++M VEK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 698 VLLYGPSGPWKDIIS 742
V+LYGP G K +++
Sbjct: 222 VILYGPPGTGKTLLA 236
Score = 38.3 bits (85), Expect = 0.039
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
+G++ K G PG GKTLLA+AVA+ TF+R GS + QK++G K+ E
Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL---IQKYLG-DGPKLVRE 269
Query: 849 RLFVMGQRNKP 881
LF + + + P
Sbjct: 270 -LFRVAEEHAP 279
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 94.3 bits (224), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+L + DPLV++M VEK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 698 VLLYGPSGPWKDIIS 742
V+LYGP G K +++
Sbjct: 222 VILYGPPGTGKTLLA 236
Score = 38.3 bits (85), Expect = 0.039
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
+G++ K G PG GKTLLA+AVA+ TF+R GS + QK++G K+ E
Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL---IQKYLG-DGPKLVRE 269
Query: 849 RLFVMGQRNKP 881
LF + + + P
Sbjct: 270 -LFRVAEEHAP 279
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 94.3 bits (224), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+L + DPLV++M VEK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 698 VLLYGPSGPWKDIIS 742
V+LYGP G K +++
Sbjct: 222 VILYGPPGTGKTLLA 236
Score = 38.3 bits (85), Expect = 0.039
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
+G++ K G PG GKTLLA+AVA+ TF+R GS + QK++G K+ E
Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL---IQKYLG-DGPKLVRE 269
Query: 849 RLFVMGQRNKP 881
LF + + + P
Sbjct: 270 -LFRVAEEHAP 279
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 94.3 bits (224), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+L + DPLV++M VEK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 698 VLLYGPSGPWKDIIS 742
V+LYGP G K +++
Sbjct: 222 VILYGPPGTGKTLLA 236
Score = 38.3 bits (85), Expect = 0.039
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
+G++ K G PG GKTLLA+AVA+ TF+R GS + QK++G K+ E
Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL---IQKYLG-DGPKLVRE 269
Query: 849 RLFVMGQRNKP 881
LF + + + P
Sbjct: 270 -LFRVAEEHAP 279
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 94.3 bits (224), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+L + DPLV++M VEK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 698 VLLYGPSGPWKDIIS 742
V+LYGP G K +++
Sbjct: 222 VILYGPPGTGKTLLA 236
Score = 38.3 bits (85), Expect = 0.039
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
+G++ K G PG GKTLLA+AVA+ TF+R GS + QK++G K+ E
Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL---IQKYLG-DGPKLVRE 269
Query: 849 RLFVMGQRNKP 881
LF + + + P
Sbjct: 270 -LFRVAEEHAP 279
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 94.3 bits (224), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+L + DPLV++M VEK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 698 VLLYGPSGPWKDIIS 742
V+LYGP G K +++
Sbjct: 222 VILYGPPGTGKTLLA 236
Score = 38.3 bits (85), Expect = 0.039
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
+G++ K G PG GKTLLA+AVA+ TF+R GS + QK++G K+ E
Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL---IQKYLG-DGPKLVRE 269
Query: 849 RLFVMGQRNKP 881
LF + + + P
Sbjct: 270 -LFRVAEEHAP 279
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 94.3 bits (224), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+L + DPLV++M VEK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 698 VLLYGPSGPWKDIIS 742
V+LYGP G K +++
Sbjct: 222 VILYGPPGTGKTLLA 236
Score = 38.3 bits (85), Expect = 0.039
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
+G++ K G PG GKTLLA+AVA+ TF+R GS + QK++G K+ E
Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL---IQKYLG-DGPKLVRE 269
Query: 849 RLFVMGQRNKP 881
LF + + + P
Sbjct: 270 -LFRVAEEHAP 279
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 94.3 bits (224), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+L + DPLV++M VEK P TY +GGLD QI+EIKE +ELP+ HPE ++ +GI PKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 698 VLLYGPSGPWKDIIS 742
V+LYGP G K +++
Sbjct: 222 VILYGPPGTGKTLLA 236
Score = 38.3 bits (85), Expect = 0.039
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
+G++ K G PG GKTLLA+AVA+ TF+R GS + QK++G K+ E
Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL---IQKYLG-DGPKLVRE 269
Query: 849 RLFVMGQRNKP 881
LF + + + P
Sbjct: 270 -LFRVAEEHAP 279
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 90.2 bits (214), Expect = 9e-18
Identities = 41/81 (50%), Positives = 56/81 (69%)
Frame = +2
Query: 494 QRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDA 673
+ K +H LP K+DP V++M VE+ PD TY VGG +QI++++EV+E P+ HPE F
Sbjct: 144 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVN 203
Query: 674 LGIAQPKGVLLYGPSGPWKDI 736
LGI PKGVLL+GP G K +
Sbjct: 204 LGIEPPKGVLLFGPPGTGKTL 224
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
LG+ K G PG GKTL ARAVA+ FIR GS + QK++G + A+M E
Sbjct: 204 LGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL---VQKYVG-EGARMVRE 259
Query: 849 RLFVMGQRNK 878
LF M + K
Sbjct: 260 -LFEMARTKK 268
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 90.2 bits (214), Expect = 9e-18
Identities = 41/81 (50%), Positives = 56/81 (69%)
Frame = +2
Query: 494 QRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDA 673
+ K +H LP K+DP V++M VE+ PD TY VGG +QI++++EV+E P+ HPE F
Sbjct: 144 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVN 203
Query: 674 LGIAQPKGVLLYGPSGPWKDI 736
LGI PKGVLL+GP G K +
Sbjct: 204 LGIEPPKGVLLFGPPGTGKTL 224
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
LG+ K G PG GKTL ARAVA+ FIR GS + QK++G + A+M E
Sbjct: 204 LGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL---VQKYVG-EGARMVRE 259
Query: 849 RLFVMGQRNK 878
LF M + K
Sbjct: 260 -LFEMARTKK 268
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 90.2 bits (214), Expect = 9e-18
Identities = 41/81 (50%), Positives = 56/81 (69%)
Frame = +2
Query: 494 QRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDA 673
+ K +H LP K+DP V++M VE+ PD TY VGG +QI++++EV+E P+ HPE F
Sbjct: 120 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVN 179
Query: 674 LGIAQPKGVLLYGPSGPWKDI 736
LGI PKGVLL+GP G K +
Sbjct: 180 LGIEPPKGVLLFGPPGTGKTL 200
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
LG+ K G PG GKTL ARAVA+ FIR GS + QK++G + A+M E
Sbjct: 180 LGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL---VQKYVG-EGARMVRE 235
Query: 849 RLFVMGQRNK 878
LF M + K
Sbjct: 236 -LFEMARTKK 244
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 90.2 bits (214), Expect = 9e-18
Identities = 41/81 (50%), Positives = 56/81 (69%)
Frame = +2
Query: 494 QRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDA 673
+ K +H LP K+DP V++M VE+ PD TY VGG +QI++++EV+E P+ HPE F
Sbjct: 144 RNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVN 203
Query: 674 LGIAQPKGVLLYGPSGPWKDI 736
LGI PKGVLL+GP G K +
Sbjct: 204 LGIEPPKGVLLFGPPGTGKTL 224
Score = 39.5 bits (88), Expect = 0.017
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
LG+ K G PG GKTL ARAVA+ FIR GS + QK++G + A+M E
Sbjct: 204 LGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL---VQKYVG-EGARMVRE 259
Query: 849 RLFVMGQRNK 878
LF M + K
Sbjct: 260 -LFEMARTKK 268
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 84.2 bits (199), Expect = 6e-16
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = +2
Query: 503 LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 682
L + + LP +VDPLV M E + +Y +GGL +QI+E++EVIELP+ +PELF +GI
Sbjct: 105 LTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGI 164
Query: 683 AQPKGVLLYGPSGPWKDIISSCCRSPHEVYF 775
PKG LLYGP G K +++ S + F
Sbjct: 165 IPPKGCLLYGPPGTGKTLLARAVASQLDCNF 195
Score = 37.1 bits (82), Expect = 0.089
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKA 830
+G+ K G PG GKTLLARAVA + C F++ + K+IG A
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLK-VVSSSIVDKYIGESA 212
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 84.2 bits (199), Expect = 6e-16
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = +2
Query: 503 LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 682
L + + LP +VDPLV M E + +Y +GGL +QI+E++EVIELP+ +PELF +GI
Sbjct: 105 LTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGI 164
Query: 683 AQPKGVLLYGPSGPWKDIISSCCRSPHEVYF 775
PKG LLYGP G K +++ S + F
Sbjct: 165 IPPKGCLLYGPPGTGKTLLARAVASQLDCNF 195
Score = 37.1 bits (82), Expect = 0.089
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKA 830
+G+ K G PG GKTLLARAVA + C F++ + K+IG A
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLK-VVSSSIVDKYIGESA 212
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 84.2 bits (199), Expect = 6e-16
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = +2
Query: 503 LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 682
L + + LP +VDPLV M E + +Y +GGL +QI+E++EVIELP+ +PELF +GI
Sbjct: 105 LTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGI 164
Query: 683 AQPKGVLLYGPSGPWKDIISSCCRSPHEVYF 775
PKG LLYGP G K +++ S + F
Sbjct: 165 IPPKGCLLYGPPGTGKTLLARAVASQLDCNF 195
Score = 37.1 bits (82), Expect = 0.089
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKA 830
+G+ K G PG GKTLLARAVA + C F++ + K+IG A
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLK-VVSSSIVDKYIGESA 212
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 84.2 bits (199), Expect = 6e-16
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = +2
Query: 503 LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 682
L + + LP +VDPLV M E + +Y +GGL +QI+E++EVIELP+ +PELF +GI
Sbjct: 105 LTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGI 164
Query: 683 AQPKGVLLYGPSGPWKDIISSCCRSPHEVYF 775
PKG LLYGP G K +++ S + F
Sbjct: 165 IPPKGCLLYGPPGTGKTLLARAVASQLDCNF 195
Score = 37.1 bits (82), Expect = 0.089
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKA 830
+G+ K G PG GKTLLARAVA + C F++ + K+IG A
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLK-VVSSSIVDKYIGESA 212
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 84.2 bits (199), Expect = 6e-16
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = +2
Query: 503 LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 682
L + + LP +VDPLV M E + +Y +GGL +QI+E++EVIELP+ +PELF +GI
Sbjct: 105 LTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGI 164
Query: 683 AQPKGVLLYGPSGPWKDIISSCCRSPHEVYF 775
PKG LLYGP G K +++ S + F
Sbjct: 165 IPPKGCLLYGPPGTGKTLLARAVASQLDCNF 195
Score = 37.1 bits (82), Expect = 0.089
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKA 830
+G+ K G PG GKTLLARAVA + C F++ + K+IG A
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLK-VVSSSIVDKYIGESA 212
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 82.2 bits (194), Expect = 2e-15
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP + D V M V++ P Y +GGLDKQI+E+ E I LP+ H E F+ LGI PKGV
Sbjct: 129 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGV 188
Query: 701 LLYGPSGPWKDIISSCCRSPHEVYF 775
L+YGP G K +++ C + + F
Sbjct: 189 LMYGPPGTGKTLLARACAAQTKATF 213
Score = 36.7 bits (81), Expect = 0.12
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG++ K G PG GKTLLARA A + TF++ + Q FIG AK+
Sbjct: 180 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG-PQLVQMFIG-DGAKL-VRDA 236
Query: 855 FVMGQRNKPPSFXF 896
F + + K PS F
Sbjct: 237 FALA-KEKAPSIIF 249
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 82.2 bits (194), Expect = 2e-15
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP + D V M V++ P Y +GGLDKQI+E+ E I LP+ H E F+ LGI PKGV
Sbjct: 129 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGV 188
Query: 701 LLYGPSGPWKDIISSCCRSPHEVYF 775
L+YGP G K +++ C + + F
Sbjct: 189 LMYGPPGTGKTLLARACAAQTKATF 213
Score = 36.7 bits (81), Expect = 0.12
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG++ K G PG GKTLLARA A + TF++ + Q FIG AK+
Sbjct: 180 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG-PQLVQMFIG-DGAKL-VRDA 236
Query: 855 FVMGQRNKPPSFXF 896
F + + K PS F
Sbjct: 237 FALA-KEKAPSIIF 249
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 82.2 bits (194), Expect = 2e-15
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP + D V M V++ P Y +GGLDKQI+E+ E I LP+ H E F+ LGI PKGV
Sbjct: 216 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGV 275
Query: 701 LLYGPSGPWKDIISSCCRSPHEVYF 775
L+YGP G K +++ C + + F
Sbjct: 276 LMYGPPGTGKTLLARACAAQTKATF 300
Score = 36.7 bits (81), Expect = 0.12
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG++ K G PG GKTLLARA A + TF++ + Q FIG AK+
Sbjct: 267 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG-PQLVQMFIG-DGAKL-VRDA 323
Query: 855 FVMGQRNKPPSFXF 896
F + + K PS F
Sbjct: 324 FALA-KEKAPSIIF 336
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 82.2 bits (194), Expect = 2e-15
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP + D V M V++ P Y +GGLDKQI+E+ E I LP+ H E F+ LGI PKGV
Sbjct: 164 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGV 223
Query: 701 LLYGPSGPWKDIISSCCRSPHEVYF 775
L+YGP G K +++ C + + F
Sbjct: 224 LMYGPPGTGKTLLARACAAQTKATF 248
Score = 36.7 bits (81), Expect = 0.12
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG++ K G PG GKTLLARA A + TF++ + Q FIG AK+
Sbjct: 215 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG-PQLVQMFIG-DGAKL-VRDA 271
Query: 855 FVMGQRNKPPSFXF 896
F + + K PS F
Sbjct: 272 FALA-KEKAPSIIF 284
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 82.2 bits (194), Expect = 2e-15
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP + D V M V++ P Y +GGLDKQI+E+ E I LP+ H E F+ LGI PKGV
Sbjct: 164 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGV 223
Query: 701 LLYGPSGPWKDIISSCCRSPHEVYF 775
L+YGP G K +++ C + + F
Sbjct: 224 LMYGPPGTGKTLLARACAAQTKATF 248
Score = 36.7 bits (81), Expect = 0.12
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG++ K G PG GKTLLARA A + TF++ + Q FIG AK+
Sbjct: 215 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG-PQLVQMFIG-DGAKL-VRDA 271
Query: 855 FVMGQRNKPPSFXF 896
F + + K PS F
Sbjct: 272 FALA-KEKAPSIIF 284
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 82.2 bits (194), Expect = 2e-15
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP + D V M V++ P Y +GGLDKQI+E+ E I LP+ H E F+ LGI PKGV
Sbjct: 164 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGV 223
Query: 701 LLYGPSGPWKDIISSCCRSPHEVYF 775
L+YGP G K +++ C + + F
Sbjct: 224 LMYGPPGTGKTLLARACAAQTKATF 248
Score = 36.7 bits (81), Expect = 0.12
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG++ K G PG GKTLLARA A + TF++ + Q FIG AK+
Sbjct: 215 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG-PQLVQMFIG-DGAKL-VRDA 271
Query: 855 FVMGQRNKPPSFXF 896
F + + K PS F
Sbjct: 272 FALA-KEKAPSIIF 284
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 82.2 bits (194), Expect = 2e-15
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 521 LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 700
LP + D V M V++ P Y +GGLDKQI+E+ E I LP+ H E F+ LGI PKGV
Sbjct: 149 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGV 208
Query: 701 LLYGPSGPWKDIISSCCRSPHEVYF 775
L+YGP G K +++ C + + F
Sbjct: 209 LMYGPPGTGKTLLARACAAQTKATF 233
Score = 36.7 bits (81), Expect = 0.12
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG++ K G PG GKTLLARA A + TF++ + Q FIG AK+
Sbjct: 200 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG-PQLVQMFIG-DGAKL-VRDA 256
Query: 855 FVMGQRNKPPSFXF 896
F + + K PS F
Sbjct: 257 FALA-KEKAPSIIF 269
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 76.6 bits (180), Expect = 1e-13
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
TY+M+GGL Q+K I+E+IELP+K PELF + GI P+GVLLYGP G K +I+ +
Sbjct: 350 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANE 409
Query: 761 HEVYFHTWFXDQKLVPKIYWE 823
Y +++ K Y E
Sbjct: 410 VGAYVSV-INGPEIISKFYGE 429
Score = 60.5 bits (140), Expect = 8e-09
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +2
Query: 527 NKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 706
N + P + VP+ ++ +GGL+ ++++ +E P+KHPE F +GI PKGVLL
Sbjct: 606 NDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLL 665
Query: 707 YGPSGPWKDIIS 742
YGP G K +I+
Sbjct: 666 YGPPGCSKTMIA 677
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 76.6 bits (180), Expect = 1e-13
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
TY+M+GGL Q+K I+E+IELP+K PELF + GI P+GVLLYGP G K +I+ +
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANE 410
Query: 761 HEVYFHTWFXDQKLVPKIYWE 823
Y +++ K Y E
Sbjct: 411 VGAYVSV-INGPEIISKFYGE 430
Score = 64.9 bits (151), Expect = 4e-10
Identities = 40/124 (32%), Positives = 63/124 (50%)
Frame = +2
Query: 527 NKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 706
N + P + + VP+ ++ +GGL+ ++++ +E P+KHPE F +GI PKGVLL
Sbjct: 607 NDIRPSATREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLL 666
Query: 707 YGPSGPWKDIISSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPX 886
YGP G K +I+ + + F +L+ K E S+ RE R + AP
Sbjct: 667 YGPPGCSKTMIAKALANESGLNFLA-IKGPELMNKYVGE--SERAVRETFRKA-RAVAPS 722
Query: 887 FXFF 898
FF
Sbjct: 723 IIFF 726
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 76.6 bits (180), Expect = 1e-13
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
TY+M+GGL Q+K I+E+IELP+K PELF + GI P+GVLLYGP G K +I+ +
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANE 410
Query: 761 HEVYFHTWFXDQKLVPKIYWE 823
Y +++ K Y E
Sbjct: 411 VGAYVSV-INGPEIISKFYGE 430
Score = 64.5 bits (150), Expect = 5e-10
Identities = 40/124 (32%), Positives = 62/124 (50%)
Frame = +2
Query: 527 NKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 706
N + P + VP+ ++ +GGL+ ++++ +E P+KHPE F +GI PKGVLL
Sbjct: 607 NDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLL 666
Query: 707 YGPSGPWKDIISSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPX 886
YGP G K +I+ + + F +L+ K E S+ RE R + AP
Sbjct: 667 YGPPGCSKTMIAKALANESGLNFLA-IKGSELMNKYVGE--SERAVRETFRKA-RAVAPS 722
Query: 887 FXFF 898
FF
Sbjct: 723 IIFF 726
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 76.6 bits (180), Expect = 1e-13
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
TY+M+GGL Q+K I+E+IELP+K PELF + GI P+GVLLYGP G K +I+ +
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANE 410
Query: 761 HEVYFHTWFXDQKLVPKIYWE 823
Y +++ K Y E
Sbjct: 411 VGAYVSV-INGPEIISKFYGE 430
Score = 64.1 bits (149), Expect = 7e-10
Identities = 40/124 (32%), Positives = 62/124 (50%)
Frame = +2
Query: 527 NKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 706
N + P + VP+ ++ +GGL+ ++++ +E P+KHPE F +GI PKGVLL
Sbjct: 607 NDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLL 666
Query: 707 YGPSGPWKDIISSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPX 886
YGP G K +I+ + + F +L+ K E S+ RE R + AP
Sbjct: 667 YGPPGCSKTMIAKALANESGLNFLA-IKGPELMNKYVGE--SERAVRETFRKA-RAVAPS 722
Query: 887 FXFF 898
FF
Sbjct: 723 IIFF 726
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 74.5 bits (175), Expect = 5e-13
Identities = 38/111 (34%), Positives = 64/111 (57%)
Frame = +2
Query: 563 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
E + + Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+LLYGP G K +I+
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 743 SCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXF 895
+ +F +++ K+ E S++ R+A +K AP F
Sbjct: 256 RAVANETGAFFFL-INGPEIMSKLAGE--SESNLRKAFEEA-EKNAPAIIF 302
Score = 60.9 bits (141), Expect = 6e-09
Identities = 35/113 (30%), Positives = 60/113 (53%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
V +VP T+E +GGL+ +E++E+++ PV+HP+ F G+ KGVL YGP G K ++
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 740 SSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + + F + + L W S+ RE + + ++ AP FF
Sbjct: 528 AKAIANECQANFISIKGPELLT---MWFGESEANVRE-IFDKARQAAPCVLFF 576
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 74.5 bits (175), Expect = 5e-13
Identities = 38/111 (34%), Positives = 64/111 (57%)
Frame = +2
Query: 563 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
E + + Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+LLYGP G K +I+
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 743 SCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXF 895
+ +F +++ K+ E S++ R+A +K AP F
Sbjct: 256 RAVANETGAFFFL-INGPEIMSKLAGE--SESNLRKAFEEA-EKNAPAIIF 302
Score = 60.9 bits (141), Expect = 6e-09
Identities = 35/113 (30%), Positives = 60/113 (53%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
V +VP T+E +GGL+ +E++E+++ PV+HP+ F G+ KGVL YGP G K ++
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 740 SSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + + F + + L W S+ RE + + ++ AP FF
Sbjct: 528 AKAIANECQANFISIKGPELLT---MWFGESEANVRE-IFDKARQAAPCVLFF 576
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 74.5 bits (175), Expect = 5e-13
Identities = 38/111 (34%), Positives = 64/111 (57%)
Frame = +2
Query: 563 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
E + + Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+LLYGP G K +I+
Sbjct: 34 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 93
Query: 743 SCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXF 895
+ +F +++ K+ E S++ R+A +K AP F
Sbjct: 94 RAVANETGAFFFL-INGPEIMSKLAGE--SESNLRKAFEEA-EKNAPAIIF 140
Score = 60.9 bits (141), Expect = 6e-09
Identities = 35/113 (30%), Positives = 60/113 (53%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
V +VP T+E +GGL+ +E++E+++ PV+HP+ F G+ KGVL YGP G K ++
Sbjct: 306 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 365
Query: 740 SSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + + F + + L W S+ RE + + ++ AP FF
Sbjct: 366 AKAIANECQANFISIKGPELLT---MWFGESEANVRE-IFDKARQAAPCVLFF 414
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 74.5 bits (175), Expect = 5e-13
Identities = 38/111 (34%), Positives = 64/111 (57%)
Frame = +2
Query: 563 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
E + + Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+LLYGP G K +I+
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 743 SCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXF 895
+ +F +++ K+ E S++ R+A +K AP F
Sbjct: 256 RAVANETGAFFFL-INGPEIMSKLAGE--SESNLRKAFEEA-EKNAPAIIF 302
Score = 60.9 bits (141), Expect = 6e-09
Identities = 35/113 (30%), Positives = 60/113 (53%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
V +VP T+E +GGL+ +E++E+++ PV+HP+ F G+ KGVL YGP G K ++
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 740 SSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + + F + + L W S+ RE + + ++ AP FF
Sbjct: 528 AKAIANECQANFISIKGPELLT---MWFGESEANVRE-IFDKARQAAPCVLFF 576
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 74.5 bits (175), Expect = 5e-13
Identities = 38/111 (34%), Positives = 64/111 (57%)
Frame = +2
Query: 563 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
E + + Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+LLYGP G K +I+
Sbjct: 134 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 193
Query: 743 SCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXF 895
+ +F +++ K+ E S++ R+A +K AP F
Sbjct: 194 RAVANETGAFFFL-INGPEIMSKLAGE--SESNLRKAFEEA-EKNAPAIIF 240
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 74.5 bits (175), Expect = 5e-13
Identities = 38/111 (34%), Positives = 64/111 (57%)
Frame = +2
Query: 563 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
E + + Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+LLYGP G K +I+
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 743 SCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXF 895
+ +F +++ K+ E S++ R+A +K AP F
Sbjct: 256 RAVANETGAFFFL-INGPEIMSKLAGE--SESNLRKAFEEA-EKNAPAIIF 302
Score = 60.9 bits (141), Expect = 6e-09
Identities = 35/113 (30%), Positives = 60/113 (53%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
V +VP T+E +GGL+ +E++E+++ PV+HP+ F G+ KGVL YGP G K ++
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 740 SSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + + F + + L W S+ RE + + ++ AP FF
Sbjct: 528 AKAIANECQANFISIKGPELLT---MWFGESEANVRE-IFDKARQAAPCVLFF 576
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 74.5 bits (175), Expect = 5e-13
Identities = 38/111 (34%), Positives = 64/111 (57%)
Frame = +2
Query: 563 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
E + + Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+LLYGP G K +I+
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 743 SCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXF 895
+ +F +++ K+ E S++ R+A +K AP F
Sbjct: 256 RAVANETGAFFFL-INGPEIMSKLAGE--SESNLRKAFEEA-EKNAPAIIF 302
Score = 60.9 bits (141), Expect = 6e-09
Identities = 35/113 (30%), Positives = 60/113 (53%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
V +VP T+E +GGL+ +E++E+++ PV+HP+ F G+ KGVL YGP G K ++
Sbjct: 468 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 740 SSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + + F + + L W S+ RE + + ++ AP FF
Sbjct: 528 AKAIANECQANFISIKGPELLT---MWFGESEANVRE-IFDKARQAAPCVLFF 576
>U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein.
Length = 418
Score = 70.9 bits (166), Expect = 6e-12
Identities = 29/75 (38%), Positives = 50/75 (66%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+LP + D + ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 698 VLLYGPSGPWKDIIS 742
VL+YGP G K +++
Sbjct: 202 VLMYGPPGCGKTMLA 216
Score = 39.1 bits (87), Expect = 0.022
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKT+LA+AVAHH FIR + QK++G + +M +F + + N P
Sbjct: 206 GPPGCGKTMLAKAVAHHTTAAFIRVVG-SEFVQKYLG-EGPRM-VRDVFRLAKENAP 259
>BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 70.9 bits (166), Expect = 6e-12
Identities = 29/75 (38%), Positives = 50/75 (66%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+LP + D + ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 698 VLLYGPSGPWKDIIS 742
VL+YGP G K +++
Sbjct: 202 VLMYGPPGCGKTMLA 216
Score = 39.1 bits (87), Expect = 0.022
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKT+LA+AVAHH FIR + QK++G + +M +F + + N P
Sbjct: 206 GPPGCGKTMLAKAVAHHTTAAFIRVVG-SEFVQKYLG-EGPRM-VRDVFRLAKENAP 259
>BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 70.9 bits (166), Expect = 6e-12
Identities = 29/75 (38%), Positives = 50/75 (66%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+LP + D + ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 698 VLLYGPSGPWKDIIS 742
VL+YGP G K +++
Sbjct: 202 VLMYGPPGCGKTMLA 216
Score = 39.1 bits (87), Expect = 0.022
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKT+LA+AVAHH FIR + QK++G + +M +F + + N P
Sbjct: 206 GPPGCGKTMLAKAVAHHTTAAFIRVVG-SEFVQKYLG-EGPRM-VRDVFRLAKENAP 259
>BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 387
Score = 70.9 bits (166), Expect = 6e-12
Identities = 29/75 (38%), Positives = 50/75 (66%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+LP + D + ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+G
Sbjct: 111 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 170
Query: 698 VLLYGPSGPWKDIIS 742
VL+YGP G K +++
Sbjct: 171 VLMYGPPGCGKTMLA 185
Score = 39.1 bits (87), Expect = 0.022
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKT+LA+AVAHH FIR + QK++G + +M +F + + N P
Sbjct: 175 GPPGCGKTMLAKAVAHHTTAAFIRVVG-SEFVQKYLG-EGPRM-VRDVFRLAKENAP 228
>BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 70.9 bits (166), Expect = 6e-12
Identities = 29/75 (38%), Positives = 50/75 (66%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+LP + D + ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 698 VLLYGPSGPWKDIIS 742
VL+YGP G K +++
Sbjct: 202 VLMYGPPGCGKTMLA 216
Score = 39.1 bits (87), Expect = 0.022
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKT+LA+AVAHH FIR + QK++G + +M +F + + N P
Sbjct: 206 GPPGCGKTMLAKAVAHHTTAAFIRVVG-SEFVQKYLG-EGPRM-VRDVFRLAKENAP 259
>AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo
sapiens] protein.
Length = 418
Score = 70.9 bits (166), Expect = 6e-12
Identities = 29/75 (38%), Positives = 50/75 (66%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+LP + D + ++ ++ PD Y +GG+D Q +E++E +ELP+ H EL+ +GI P+G
Sbjct: 142 VLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRG 201
Query: 698 VLLYGPSGPWKDIIS 742
VL+YGP G K +++
Sbjct: 202 VLMYGPPGCGKTMLA 216
Score = 39.1 bits (87), Expect = 0.022
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKT+LA+AVAHH FIR + QK++G + +M +F + + N P
Sbjct: 206 GPPGCGKTMLAKAVAHHTTAAFIRVVG-SEFVQKYLG-EGPRM-VRDVFRLAKENAP 259
>AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein.
Length = 418
Score = 70.5 bits (165), Expect = 8e-12
Identities = 30/75 (40%), Positives = 49/75 (65%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+LP + D + ++ + PD Y +GG+D Q +E++E +ELPV H EL+ +GI P+G
Sbjct: 142 VLPPEADSSIMMLTSGQKPDVMYADIGGMDIQKQEVREAVELPVTHFELYKQIGIDPPRG 201
Query: 698 VLLYGPSGPWKDIIS 742
VL+YGP G K +++
Sbjct: 202 VLMYGPPGCGKTMLA 216
Score = 39.1 bits (87), Expect = 0.022
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKT+LA+AVAHH FIR + QK++G + +M +F + + N P
Sbjct: 206 GPPGCGKTMLAKAVAHHTTAAFIRVVG-SEFVQKYLG-EGPRM-VRDVFRLAKENAP 259
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 60.9 bits (141), Expect = 6e-09
Identities = 35/113 (30%), Positives = 60/113 (53%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
V +VP T+E +GGL+ +E++E+++ PV+HP+ F G+ KGVL YGP G K ++
Sbjct: 137 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 196
Query: 740 SSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + + F + + L W S+ RE + + ++ AP FF
Sbjct: 197 AKAIANECQANFISIKGPELLT---MWFGESEANVRE-IFDKARQAAPCVLFF 245
>AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing protein
protein.
Length = 305
Score = 60.9 bits (141), Expect = 6e-09
Identities = 35/113 (30%), Positives = 60/113 (53%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
V +VP T+E +GGL+ +E++E+++ PV+HP+ F G+ KGVL YGP G K ++
Sbjct: 96 VVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 155
Query: 740 SSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + + F + + L W S+ RE + + ++ AP FF
Sbjct: 156 AKAIANECQANFISIKGPELLT---MWFGESEANVRE-IFDKARQAAPCVLFF 204
>AB208906-1|BAD92143.1| 836|Homo sapiens peroxisomal biogenesis
factor 6 variant protein.
Length = 836
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISS 745
K+P ++ VGGL + KEI E I+LP++HPEL +LG+ + G+LL+GP G K +++
Sbjct: 715 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 772
Query: 746 CCRSPHEVYFHTW 784
+ + F W
Sbjct: 773 AVATECSLTFLRW 785
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 54.4 bits (125), Expect = 5e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
I P+ ++ LM ++ V +E +GGL+ ++K+ IE P+K P F +G+ QPKG
Sbjct: 444 IQPSSFRSVIGLMDIKPVD---WEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKG 500
Query: 698 VLLYGPSG 721
VLLYGP G
Sbjct: 501 VLLYGPPG 508
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 593 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWK 730
+GGL + ++E++ LP+++P ALG+A P+GVLL GP G K
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGK 247
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIG 821
+GL K G PG KT L RA+A C+F+ S + + F+G
Sbjct: 493 MGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSG-ADLFSPFVG 540
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 54.4 bits (125), Expect = 5e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
I P+ ++ LM ++ V +E +GGL+ ++K+ IE P+K P F +G+ QPKG
Sbjct: 444 IQPSSFRSVIGLMDIKPVD---WEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKG 500
Query: 698 VLLYGPSG 721
VLLYGP G
Sbjct: 501 VLLYGPPG 508
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 593 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWK 730
+GGL + ++E++ LP+++P ALG+A P+GVLL GP G K
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGK 247
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIG 821
+GL K G PG KT L RA+A C+F+ S + + F+G
Sbjct: 493 MGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSG-ADLFSPFVG 540
>U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein.
Length = 980
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
K+P ++ VGGL + KEI E I+LP++HPEL +LG+ + G+LL+GP G K +++
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLA 754
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
+ LGLR + G PG GKTLLA+AVA TF ++G + N Y
Sbjct: 731 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMY 777
>D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly factor-2
protein.
Length = 980
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
K+P ++ VGGL + KEI E I+LP++HPEL +LG+ + G+LL+GP G K +++
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLA 754
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
+ LGLR + G PG GKTLLA+AVA TF ++G + N Y
Sbjct: 731 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMY 777
>BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
K+P ++ VGGL + KEI E I+LP++HPEL +LG+ + G+LL+GP G K +++
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLA 754
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
+ LGLR + G PG GKTLLA+AVA TF ++G + N Y
Sbjct: 731 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMY 777
>AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
K+P ++ VGGL + KEI E I+LP++HPEL +LG+ + G+LL+GP G K +++
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLA 754
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
+ LGLR + G PG GKTLLA+AVA TF ++G + N Y
Sbjct: 731 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMY 777
>AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly
factor-2 protein.
Length = 980
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
K+P ++ VGGL + KEI E I+LP++HPEL +LG+ + G+LL+GP G K +++
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLA 754
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
+ LGLR + G PG GKTLLA+AVA TF ++G + N Y
Sbjct: 731 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMY 777
>AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein.
Length = 892
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
K+P ++ VGGL + KEI E I+LP++HPEL +LG+ + G+LL+GP G K +++
Sbjct: 610 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLA 666
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
+ LGLR + G PG GKTLLA+AVA TF ++G + N Y
Sbjct: 643 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMY 689
>AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein.
Length = 980
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
K+P ++ VGGL + KEI E I+LP++HPEL +LG+ + G+LL+GP G K +++
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLA 754
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
+ LGLR + G PG GKTLLA+AVA TF ++G + N Y
Sbjct: 731 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMY 777
>BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis factor
1 protein.
Length = 1283
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
+ K D ++ +GGL + + + + I+LP K+PELF L I Q G+LLYGP G K ++
Sbjct: 831 LHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLL 890
Query: 740 S 742
+
Sbjct: 891 A 891
Score = 35.1 bits (77), Expect = 0.36
Identities = 25/78 (32%), Positives = 33/78 (42%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
L +R + G PG GKTLLA +A R FI K+IG A++ +
Sbjct: 869 LPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKG-PELLSKYIG--ASEQAVRDI 925
Query: 855 FVMGQRNKPPSFXFSXAE 908
F+ Q KP F E
Sbjct: 926 FIRAQAAKPCILFFDEFE 943
>AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis gene 1
protein.
Length = 1283
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
+ K D ++ +GGL + + + + I+LP K+PELF L I Q G+LLYGP G K ++
Sbjct: 831 LHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLL 890
Query: 740 S 742
+
Sbjct: 891 A 891
Score = 35.1 bits (77), Expect = 0.36
Identities = 25/78 (32%), Positives = 33/78 (42%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
L +R + G PG GKTLLA +A R FI K+IG A++ +
Sbjct: 869 LPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKG-PELLSKYIG--ASEQAVRDI 925
Query: 855 FVMGQRNKPPSFXFSXAE 908
F+ Q KP F E
Sbjct: 926 FIRAQAAKPCILFFDEFE 943
>AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis
disorder protein 1 protein.
Length = 1283
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
+ K D ++ +GGL + + + + I+LP K+PELF L I Q G+LLYGP G K ++
Sbjct: 831 LHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLL 890
Query: 740 S 742
+
Sbjct: 891 A 891
Score = 35.1 bits (77), Expect = 0.36
Identities = 25/78 (32%), Positives = 33/78 (42%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
L +R + G PG GKTLLA +A R FI K+IG A++ +
Sbjct: 869 LPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKG-PELLSKYIG--ASEQAVRDI 925
Query: 855 FVMGQRNKPPSFXFSXAE 908
F+ Q KP F E
Sbjct: 926 FIRAQAAKPCILFFDEFE 943
>AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein.
Length = 1283
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
+ K D ++ +GGL + + + + I+LP K+PELF L I Q G+LLYGP G K ++
Sbjct: 831 LHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLL 890
Query: 740 S 742
+
Sbjct: 891 A 891
Score = 35.1 bits (77), Expect = 0.36
Identities = 25/78 (32%), Positives = 33/78 (42%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
L +R + G PG GKTLLA +A R FI K+IG A++ +
Sbjct: 869 LPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKG-PELLSKYIG--ASEQAVRDI 925
Query: 855 FVMGQRNKPPSFXFSXAE 908
F+ Q KP F E
Sbjct: 926 FIRAQAAKPCILFFDEFE 943
>AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein.
Length = 1226
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
+ K D ++ +GGL + + + + I+LP K+PELF L I Q G+LLYGP G K ++
Sbjct: 774 LHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLL 833
Query: 740 S 742
+
Sbjct: 834 A 834
Score = 35.1 bits (77), Expect = 0.36
Identities = 25/78 (32%), Positives = 33/78 (42%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
L +R + G PG GKTLLA +A R FI K+IG A++ +
Sbjct: 812 LPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKG-PELLSKYIG--ASEQAVRDI 868
Query: 855 FVMGQRNKPPSFXFSXAE 908
F+ Q KP F E
Sbjct: 869 FIRAQAAKPCILFFDEFE 886
>AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein.
Length = 1283
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
+ K D ++ +GGL + + + + I+LP K+PELF L I Q G+LLYGP G K ++
Sbjct: 831 LHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLL 890
Query: 740 S 742
+
Sbjct: 891 A 891
Score = 35.1 bits (77), Expect = 0.36
Identities = 25/78 (32%), Positives = 33/78 (42%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
L +R + G PG GKTLLA +A R FI K+IG A++ +
Sbjct: 869 LPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKG-PELLSKYIG--ASEQAVRDI 925
Query: 855 FVMGQRNKPPSFXFSXAE 908
F+ Q KP F E
Sbjct: 926 FIRAQAAKPCILFFDEFE 943
>BC113656-1|AAI13657.1| 1390|Homo sapiens ATPase family, AAA domain
containing 2 protein.
Length = 1390
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ VGGL I +KE++ P+ +PE+F+ I P+G L YGP G K +++
Sbjct: 425 FDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVA 477
>BC007123-1|AAH07123.1| 939|Homo sapiens ATAD2 protein protein.
Length = 939
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ VGGL I +KE++ P+ +PE+F+ I P+G L YGP G K +++
Sbjct: 425 FDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVA 477
>AY598335-1|AAT06746.1| 1390|Homo sapiens L16 protein.
Length = 1390
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ VGGL I +KE++ P+ +PE+F+ I P+G L YGP G K +++
Sbjct: 425 FDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVA 477
>AK097133-1|BAC04959.1| 978|Homo sapiens protein ( Homo sapiens
cDNA FLJ39814 fis, clone SPLEN2009970, weakly similar to
TAT-BINDING HOMOLOG 7. ).
Length = 978
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ VGGL I +KE++ P+ +PE+F+ I P+G L YGP G K +++
Sbjct: 425 FDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVA 477
>AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ37502 fis, clone BRAWH2016446, moderately
similar to TAT-BINDING HOMOLOG 7. ).
Length = 574
Score = 51.2 bits (117), Expect = 5e-06
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ +GGL I +KE++ P+ +PE+F+ I P+G L YGP G K +++
Sbjct: 399 FDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVA 451
>U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein
NVLp.1 protein.
Length = 750
Score = 50.4 bits (115), Expect = 9e-06
Identities = 21/59 (35%), Positives = 41/59 (69%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ + +E VGG D +KE+ +++ + ++HPE++ LG+ P+GVLL+GP G K +++
Sbjct: 152 QISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLA 209
Score = 49.2 bits (112), Expect = 2e-05
Identities = 33/110 (30%), Positives = 54/110 (49%)
Frame = +2
Query: 569 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSC 748
VP+ T+ +G L+ +E+ I PV++P+ F ALG+ P GVLL GP G K +++
Sbjct: 469 VPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKA 528
Query: 749 CRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + F + +L+ E S+ R+ + K AP FF
Sbjct: 529 VANESGLNFIS-VKGPELLNMYVGE--SERAVRQVFQRA-KNSAPCVIFF 574
>U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein
NVLp.2 protein.
Length = 856
Score = 50.4 bits (115), Expect = 9e-06
Identities = 21/59 (35%), Positives = 41/59 (69%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ + +E VGG D +KE+ +++ + ++HPE++ LG+ P+GVLL+GP G K +++
Sbjct: 258 QISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLA 315
Score = 49.2 bits (112), Expect = 2e-05
Identities = 33/110 (30%), Positives = 54/110 (49%)
Frame = +2
Query: 569 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSC 748
VP+ T+ +G L+ +E+ I PV++P+ F ALG+ P GVLL GP G K +++
Sbjct: 575 VPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKA 634
Query: 749 CRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + F + +L+ E S+ R+ + K AP FF
Sbjct: 635 VANESGLNFIS-VKGPELLNMYVGE--SERAVRQVFQRA-KNSAPCVIFF 680
>BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein.
Length = 659
Score = 50.4 bits (115), Expect = 9e-06
Identities = 21/59 (35%), Positives = 41/59 (69%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ + +E VGG D +KE+ +++ + ++HPE++ LG+ P+GVLL+GP G K +++
Sbjct: 61 QISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLA 118
Score = 49.2 bits (112), Expect = 2e-05
Identities = 33/110 (30%), Positives = 54/110 (49%)
Frame = +2
Query: 569 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSC 748
VP+ T+ +G L+ +E+ I PV++P+ F ALG+ P GVLL GP G K +++
Sbjct: 378 VPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKA 437
Query: 749 CRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXFXFF 898
+ + F + +L+ E S+ R+ + K AP FF
Sbjct: 438 VANESGLNFIS-VKGPELLNMYVGE--SERAVRQVFQRA-KNSAPCVIFF 483
>BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein.
Length = 287
Score = 49.6 bits (113), Expect = 2e-05
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ-PKGVLLYGPSGPWKDIIS 742
T+ + GLD I ++K+ + LP+K LF+ + Q PKGVLLYGP G K +I+
Sbjct: 89 TWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIA 143
>BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein.
Length = 330
Score = 49.6 bits (113), Expect = 2e-05
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ-PKGVLLYGPSGPWKDIIS 742
T+ + GLD I ++K+ + LP+K LF+ + Q PKGVLLYGP G K +I+
Sbjct: 58 TWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIA 112
>BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein.
Length = 674
Score = 49.6 bits (113), Expect = 2e-05
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +2
Query: 515 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 694
K L K+ L+ +++ P +E + G++ IKE++ P+ P++F L PK
Sbjct: 377 KNLEPKMIELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR-GPPK 435
Query: 695 GVLLYGPSGPWKDIISSCCRS 757
G+LL+GP G K +I C S
Sbjct: 436 GILLFGPPGTGKTLIGKCIAS 456
>BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein.
Length = 674
Score = 49.6 bits (113), Expect = 2e-05
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +2
Query: 515 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 694
K L K+ L+ +++ P +E + G++ IKE++ P+ P++F L PK
Sbjct: 377 KNLEPKMIELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR-GPPK 435
Query: 695 GVLLYGPSGPWKDIISSCCRS 757
G+LL+GP G K +I C S
Sbjct: 436 GILLFGPPGTGKTLIGKCIAS 456
>AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA domain
containing 1 protein.
Length = 361
Score = 49.6 bits (113), Expect = 2e-05
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ-PKGVLLYGPSGPWKDIIS 742
T+ + GLD I ++K+ + LP+K LF+ + Q PKGVLLYGP G K +I+
Sbjct: 89 TWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIA 143
>AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to
MSP1 PROTEIN HOMOLOG. ).
Length = 361
Score = 49.6 bits (113), Expect = 2e-05
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ-PKGVLLYGPSGPWKDIIS 742
T+ + GLD I ++K+ + LP+K LF+ + Q PKGVLLYGP G K +I+
Sbjct: 89 TWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIA 143
>AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ13080 fis, clone NT2RP3002007, weakly similar to
SAP1 PROTEIN. ).
Length = 674
Score = 49.6 bits (113), Expect = 2e-05
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +2
Query: 515 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 694
K L K+ L+ +++ P +E + G++ IKE++ P+ P++F L PK
Sbjct: 377 KNLEPKMIELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR-GPPK 435
Query: 695 GVLLYGPSGPWKDIISSCCRS 757
G+LL+GP G K +I C S
Sbjct: 436 GILLFGPPGTGKTLIGKCIAS 456
>AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein.
Length = 674
Score = 49.6 bits (113), Expect = 2e-05
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +2
Query: 515 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 694
K L K+ L+ +++ P +E + G++ IKE++ P+ P++F L PK
Sbjct: 377 KNLEPKMIELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR-GPPK 435
Query: 695 GVLLYGPSGPWKDIISSCCRS 757
G+LL+GP G K +I C S
Sbjct: 436 GILLFGPPGTGKTLIGKCIAS 456
>BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 280 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 338
Query: 761 HEVYFH 778
+V F+
Sbjct: 339 ADVPFY 344
>BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 280 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 338
Query: 761 HEVYFH 778
+V F+
Sbjct: 339 ADVPFY 344
>BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 740
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 337 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395
Query: 761 HEVYFH 778
+V F+
Sbjct: 396 ADVPFY 401
>AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein.
Length = 716
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 280 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 338
Query: 761 HEVYFH 778
+V F+
Sbjct: 339 ADVPFY 344
>AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 280 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 338
Query: 761 HEVYFH 778
+V F+
Sbjct: 339 ADVPFY 344
>AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 337 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395
Query: 761 HEVYFH 778
+V F+
Sbjct: 396 ADVPFY 401
>AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 280 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 338
Query: 761 HEVYFH 778
+V F+
Sbjct: 339 ADVPFY 344
>AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 337 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395
Query: 761 HEVYFH 778
+V F+
Sbjct: 396 ADVPFY 401
>AJ295618-1|CAB99462.1| 517|Homo sapiens putative ATPases protein.
Length = 517
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 83 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 141
Query: 761 HEVYFH 778
+V F+
Sbjct: 142 ADVPFY 147
>AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent
metalloprotease YME1L protein.
Length = 716
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 280 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 338
Query: 761 HEVYFH 778
+V F+
Sbjct: 339 ADVPFY 344
>AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent
metalloprotease FtsH1 homolog protein.
Length = 773
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
T+E V G+++ +E++EV+E +K+P+ F LG PKG+LL GP G K +++
Sbjct: 337 TFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395
Query: 761 HEVYFH 778
+V F+
Sbjct: 396 ADVPFY 401
>AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein.
Length = 1283
Score = 49.2 bits (112), Expect = 2e-05
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII 739
+ K D ++ + GL + + + + I+LP K+PELF L I Q G+LLYGP G K ++
Sbjct: 831 LHKPRDLGWDKIDGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLL 890
Query: 740 S 742
+
Sbjct: 891 A 891
Score = 35.1 bits (77), Expect = 0.36
Identities = 25/78 (32%), Positives = 33/78 (42%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
L +R + G PG GKTLLA +A R FI K+IG A++ +
Sbjct: 869 LPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKG-PELLSKYIG--ASEQAVRDI 925
Query: 855 FVMGQRNKPPSFXFSXAE 908
F+ Q KP F E
Sbjct: 926 FIRAQAAKPCILFFDEFE 943
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +2
Query: 593 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWK 730
+GGL + ++E++ LP+++P ALG+A P+GVLL GP G K
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGK 247
>BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-like
2 protein.
Length = 466
Score = 44.4 bits (100), Expect = 6e-04
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 572 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKDIIS 742
P+ + + GLD + +KE + P+++P+LF GI P KG+LLYGP G K +++
Sbjct: 177 PNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLF--TGILSPWKGLLLYGPPGTGKTLLA 232
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTF 776
G PG GKTLLA+AVA + TF
Sbjct: 222 GPPGTGKTLLAKAVATECKTTF 243
>U03985-1|AAA17411.1| 751|Homo sapiens protein ( Human
N-ethylmaleimide-sensitive factor mRNA, partial cds. ).
Length = 751
Score = 43.6 bits (98), Expect = 0.001
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +2
Query: 572 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
PD +E +GGLDK+ +I + V PE+ + +G KG+LLYGP G K +++
Sbjct: 218 PDWNFEKMGIGGLDKEFSDIFRRAFAFRVFPPEIVEQMGCIHVKGILLYGPPGCGKTLLA 277
>AF135168-1|AAF70545.1| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 43.6 bits (98), Expect = 0.001
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +2
Query: 572 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
PD +E +GGLDK+ +I + V PE+ + +G KG+LLYGP G K +++
Sbjct: 211 PDWNFEKMGIGGLDKEFSDIFRRAFAFRVFPPEIVEQMGCIHVKGILLYGPPGCGKTLLA 270
>AF102846-1|AAF04745.2| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 43.6 bits (98), Expect = 0.001
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +2
Query: 572 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
PD +E +GGLDK+ +I + V PE+ + +G KG+LLYGP G K +++
Sbjct: 211 PDWNFEKMGIGGLDKEFSDIFRRAFAFRVFPPEIVEQMGCIHVKGILLYGPPGCGKTLLA 270
>BC030613-1|AAH30613.1| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 42.7 bits (96), Expect = 0.002
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +2
Query: 572 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
PD +E +GGLDK+ +I + V PE+ + +G KG+LLYGP G K +++
Sbjct: 211 PDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLA 270
>AC000064-1|AAB46346.1| 541|Homo sapiens WUGSC:H_RG083M05.1
protein.
Length = 541
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Frame = +2
Query: 560 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVK-------HPELFDALGIAQPKGVLLYGPS 718
+ K D ++ +GGL + + + + I+LP K +PELF L I Q G+LLYGP
Sbjct: 137 LHKPRDLGWDKIGGLHEVRQILMDTIQLPAKVCLKKEKYPELFANLPIRQRTGILLYGPP 196
Query: 719 GPWKDIIS 742
G K +++
Sbjct: 197 GTGKTLLA 204
Score = 35.1 bits (77), Expect = 0.36
Identities = 25/78 (32%), Positives = 33/78 (42%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
L +R + G PG GKTLLA +A R FI K+IG A++ +
Sbjct: 182 LPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKG-PELLSKYIG--ASEQAVRDI 238
Query: 855 FVMGQRNKPPSFXFSXAE 908
F+ Q KP F E
Sbjct: 239 FIRAQAAKPCILFFDEFE 256
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 712
+ L+ +++EK P+ + V GL+ + +KE + LP+K P LF G P +G+LL+G
Sbjct: 111 EQLMGAVVMEK-PNIRWNDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFG 167
Query: 713 PSGPWKDIIS 742
P G K ++
Sbjct: 168 PPGTGKSYLA 177
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 712
+ L+ +++EK P+ + V GL+ + +KE + LP+K P LF G P +G+LL+G
Sbjct: 111 EQLMGAVVMEK-PNIRWNDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFG 167
Query: 713 PSGPWKDIIS 742
P G K ++
Sbjct: 168 PPGTGKSYLA 177
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 712
+ L+ +++EK P+ + V GL+ + +KE + LP+K P LF G P +G+LL+G
Sbjct: 111 EQLMGAVVMEK-PNIRWNDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFG 167
Query: 713 PSGPWKDIIS 742
P G K ++
Sbjct: 168 PPGTGKSYLA 177
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 712
+ L+ +++EK P+ + V GL+ + +KE + LP+K P LF G P +G+LL+G
Sbjct: 111 EQLMGAVVMEK-PNIRWNDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFG 167
Query: 713 PSGPWKDIIS 742
P G K ++
Sbjct: 168 PPGTGKSYLA 177
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 712
+ L+ +++EK P+ + V GL+ + +KE + LP+K P LF G P +G+LL+G
Sbjct: 106 EQLMGAVVMEK-PNIRWNDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFG 162
Query: 713 PSGPWKDIIS 742
P G K ++
Sbjct: 163 PPGTGKSYLA 172
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 712
+ L+ +++EK P+ + V GL+ + +KE + LP+K P LF G P +G+LL+G
Sbjct: 111 EQLMGAVVMEK-PNIRWNDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFG 167
Query: 713 PSGPWKDIIS 742
P G K ++
Sbjct: 168 PPGTGKSYLA 177
>BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein.
Length = 584
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 542 LVSLMMVEKVPDST---YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 712
L +L+M E V + T ++ + G D + ++E++ LP PELF L A +G+LL+G
Sbjct: 292 LANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGLR-APARGLLLFG 350
Query: 713 PSGPWKDIISSCCRSPHEVYF 775
P G K +++ + F
Sbjct: 351 PPGNGKTMLAKAVAAESNATF 371
>AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 542 LVSLMMVEKVPDST---YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 712
L +L+M E V + T ++ + G D + ++E++ LP PELF L A +G+LL+G
Sbjct: 324 LANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGLR-APARGLLLFG 382
Query: 713 PSGPWKDIISSCCRSPHEVYF 775
P G K +++ + F
Sbjct: 383 PPGNGKTMLAKAVAAESNATF 403
>AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 542 LVSLMMVEKVPDST---YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 712
L +L+M E V + T ++ + G D + ++E++ LP PELF L A +G+LL+G
Sbjct: 324 LANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGLR-APARGLLLFG 382
Query: 713 PSGPWKDIISSCCRSPHEVYF 775
P G K +++ + F
Sbjct: 383 PPGNGKTMLAKAVAAESNATF 403
>AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein.
Length = 584
Score = 41.1 bits (92), Expect = 0.005
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +2
Query: 542 LVSLMMVEKVPDST---YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 712
L +L+M E V + T ++ + G D + ++E++ LP PELF L A +G+LL+G
Sbjct: 292 LANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGLR-APARGLLLFG 350
Query: 713 PSGPWKDIISSCCRSPHEVYF 775
P G K +++ + F
Sbjct: 351 PPGNGKTMLAKAVAAESNATF 371
>AK001267-1|BAA91590.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ10405 fis, clone NT2RM4000496, weakly similar to
SAP1 PROTEIN. ).
Length = 639
Score = 40.7 bits (91), Expect = 0.007
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +2
Query: 542 LVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSG 721
LV+ ++ + P + + GLD IKE + PV + F L A P+ +LL+GP G
Sbjct: 351 LVTNEIITQGPPVDWNDIAGLDLVKAVIKEEVLWPVLRSDAFSGL-TALPRSILLFGPRG 409
Query: 722 PWKDIISSCCRS 757
K ++ C S
Sbjct: 410 TGKTLLGRCIAS 421
>AC093727-1|AAX81992.1| 639|Homo sapiens unknown protein.
Length = 639
Score = 40.7 bits (91), Expect = 0.007
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +2
Query: 542 LVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSG 721
LV+ ++ + P + + GLD IKE + PV + F L A P+ +LL+GP G
Sbjct: 351 LVTNEIITQGPPVDWNDIAGLDLVKAVIKEEVLWPVLRSDAFSGL-TALPRSILLFGPRG 409
Query: 722 PWKDIISSCCRS 757
K ++ C S
Sbjct: 410 TGKTLLGRCIAS 421
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 542 LVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPS 718
L +++E+ P+ + V GL+ + +KE + LP+K P LF G P +G+LL+GP
Sbjct: 120 LQGAIVIER-PNVKWSDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFGPP 176
Query: 719 GPWKDIIS 742
G K ++
Sbjct: 177 GTGKSYLA 184
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 542 LVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPS 718
L +++E+ P+ + V GL+ + +KE + LP+K P LF G P +G+LL+GP
Sbjct: 120 LQGAIVIER-PNVKWSDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFGPP 176
Query: 719 GPWKDIIS 742
G K ++
Sbjct: 177 GTGKSYLA 184
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 542 LVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPS 718
L +++E+ P+ + V GL+ + +KE + LP+K P LF G P +G+LL+GP
Sbjct: 120 LQGAIVIER-PNVKWSDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFGPP 176
Query: 719 GPWKDIIS 742
G K ++
Sbjct: 177 GTGKSYLA 184
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 40.3 bits (90), Expect = 0.010
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 542 LVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPS 718
L +++E+ P+ + V GL+ + +KE + LP+K P LF G P +G+LL+GP
Sbjct: 120 LQGAIVIER-PNVKWSDVAGLEGAKEALKEAVILPIKFPHLF--TGKRTPWRGILLFGPP 176
Query: 719 GPWKDIIS 742
G K ++
Sbjct: 177 GTGKSYLA 184
>Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 39.9 bits (89), Expect = 0.013
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
+++ V G+ + E++E ++ +K PE F LG PKG LL GP G K +++ +
Sbjct: 307 SFKDVAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
Query: 761 HEVYF 775
+V F
Sbjct: 366 AQVPF 370
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
+ LG + K + +G PG GKTLLA+AVA + F+
Sbjct: 335 LQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFL 371
>BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (pure
and complicated autosomal recessive) protein.
Length = 795
Score = 39.9 bits (89), Expect = 0.013
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
+++ V G+ + E++E ++ +K PE F LG PKG LL GP G K +++ +
Sbjct: 307 SFKDVAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
Query: 761 HEVYF 775
+V F
Sbjct: 366 AQVPF 370
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
+ LG + K + +G PG GKTLLA+AVA + F+
Sbjct: 335 LQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFL 371
>BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein.
Length = 732
Score = 39.9 bits (89), Expect = 0.013
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
+++ V G+ + E++E ++ +K PE F LG PKG LL GP G K +++ +
Sbjct: 244 SFKDVAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 302
Query: 761 HEVYF 775
+V F
Sbjct: 303 AQVPF 307
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
+ LG + K + +G PG GKTLLA+AVA + F+
Sbjct: 272 LQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFL 308
>AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 39.9 bits (89), Expect = 0.013
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSP 760
+++ V G+ + E++E ++ +K PE F LG PKG LL GP G K +++ +
Sbjct: 307 SFKDVAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
Query: 761 HEVYF 775
+V F
Sbjct: 366 AQVPF 370
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
+ LG + K + +G PG GKTLLA+AVA + F+
Sbjct: 335 LQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFL 371
>BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 37.9 bits (84), Expect = 0.051
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKD 733
++ + P+ ++ + L + K +KE + LP+ PE F GI +P KGVL+ GP G K
Sbjct: 199 IISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKT 256
Query: 734 IIS 742
+++
Sbjct: 257 LLA 259
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 678 GLRNQKESYCM-GLPGPGKTLLARAVAHHMRCTFIRGS 788
G+R + M G PG GKTLLA+AVA + TF S
Sbjct: 237 GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVS 274
>BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.051
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKD 733
++ + P+ ++ + L + K +KE + LP+ PE F GI +P KGVL+ GP G K
Sbjct: 199 IISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKT 256
Query: 734 IIS 742
+++
Sbjct: 257 LLA 259
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 678 GLRNQKESYCM-GLPGPGKTLLARAVAHHMRCTFIRGS 788
G+R + M G PG GKTLLA+AVA + TF S
Sbjct: 237 GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVS 274
>AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 37.9 bits (84), Expect = 0.051
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKD 733
++ + P+ ++ + L + K +KE + LP+ PE F GI +P KGVL+ GP G K
Sbjct: 199 IISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKT 256
Query: 734 IIS 742
+++
Sbjct: 257 LLA 259
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 678 GLRNQKESYCM-GLPGPGKTLLARAVAHHMRCTFIRGS 788
G+R + M G PG GKTLLA+AVA + TF S
Sbjct: 237 GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVS 274
>AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.051
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKD 733
++ + P+ ++ + L + K +KE + LP+ PE F GI +P KGVL+ GP G K
Sbjct: 199 IISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKT 256
Query: 734 IIS 742
+++
Sbjct: 257 LLA 259
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 678 GLRNQKESYCM-GLPGPGKTLLARAVAHHMRCTFIRGS 788
G+R + M G PG GKTLLA+AVA + TF S
Sbjct: 237 GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVS 274
>AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.051
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPSGPWKD 733
++ + P+ ++ + L + K +KE + LP+ PE F GI +P KGVL+ GP G K
Sbjct: 199 IISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKT 256
Query: 734 IIS 742
+++
Sbjct: 257 LLA 259
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 678 GLRNQKESYCM-GLPGPGKTLLARAVAHHMRCTFIRGS 788
G+R + M G PG GKTLLA+AVA + TF S
Sbjct: 237 GIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVS 274
>Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein
protein.
Length = 797
Score = 37.5 bits (83), Expect = 0.067
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 575 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCR 754
D ++ V G ++ EI E + +K+P+ + LG PKG +L GP G K +++
Sbjct: 304 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 362
Query: 755 SPHEVYFHT 781
V F T
Sbjct: 363 GEANVPFIT 371
>BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene
3-like 2 (yeast) protein.
Length = 797
Score = 37.5 bits (83), Expect = 0.067
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 575 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCR 754
D ++ V G ++ EI E + +K+P+ + LG PKG +L GP G K +++
Sbjct: 304 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 362
Query: 755 SPHEVYFHT 781
V F T
Sbjct: 363 GEANVPFIT 371
>BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase
family gene 3-like 2 (yeast) protein.
Length = 812
Score = 37.5 bits (83), Expect = 0.067
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 575 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCR 754
D ++ V G ++ EI E + +K+P+ + LG PKG +L GP G K +++
Sbjct: 319 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 377
Query: 755 SPHEVYFHT 781
V F T
Sbjct: 378 GEANVPFIT 386
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 37.1 bits (82), Expect = 0.089
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 712
+ L+ +++EK P T E G + +KE + LP+K P LF G P G LL+G
Sbjct: 111 EQLMGAVVMEK-PQHTVERRGRAGGAKEALKEAVILPIKFPHLF--TGKTHPGGGYLLFG 167
Query: 713 PSGPWKDIIS 742
P G K ++
Sbjct: 168 PPGTGKSYLA 177
>BX276089-1|CAI16432.1| 311|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 311
Score = 33.9 bits (74), Expect = 0.83
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 684 RNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGS 788
R +K +G PG GKTLLA+AVA + TF S
Sbjct: 164 REEKGVLMVGPPGTGKTLLAKAVATECKTTFFNVS 198
>BC050428-1|AAH50428.1| 311|Homo sapiens KATNA1 protein protein.
Length = 311
Score = 33.9 bits (74), Expect = 0.83
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 684 RNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGS 788
R +K +G PG GKTLLA+AVA + TF S
Sbjct: 164 REEKGVLMVGPPGTGKTLLAKAVATECKTTFFNVS 198
>AL078581-1|CAI19504.1| 311|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 311
Score = 33.9 bits (74), Expect = 0.83
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 684 RNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGS 788
R +K +G PG GKTLLA+AVA + TF S
Sbjct: 164 REEKGVLMVGPPGTGKTLLAKAVATECKTTFFNVS 198
>AK023411-1|BAB14567.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ13349 fis, clone OVARC1002138, moderately
similar to SAP1 PROTEIN. ).
Length = 254
Score = 33.9 bits (74), Expect = 0.83
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 656 PELFDALGIAQPKGVLLYGPSGPWKDIISSCCRS 757
P++F L PKG+LL+GP G K +I C S
Sbjct: 4 PDIFTGLR-GPPKGILLFGPPGTGKTLIGKCIAS 36
>AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein.
Length = 622
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 701 LLYGPSGPWKDIISSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQA 880
++ GP+ P+ D ++ + + F T LV ++ +E+ ++ CREALR K
Sbjct: 414 IVQGPTEPYADFVNRLMEAAGNI-FETVEEAMPLVRRLAYEQANKT-CREALRPWQHKDI 471
Query: 881 PXF 889
P F
Sbjct: 472 PTF 474
>BC125201-1|AAI25202.1| 891|Homo sapiens SLFN5 protein protein.
Length = 891
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 681 LRNQKESYCMGLPGPGKTLLARAVAHHMRCTF 776
LR +E + GLPG GKT+LA + +R F
Sbjct: 568 LRKTRELFVHGLPGSGKTILALRIMEKIRNVF 599
>BC125200-1|AAI25201.1| 891|Homo sapiens schlafen family member 5
protein.
Length = 891
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 681 LRNQKESYCMGLPGPGKTLLARAVAHHMRCTF 776
LR +E + GLPG GKT+LA + +R F
Sbjct: 568 LRKTRELFVHGLPGSGKTILALRIMEKIRNVF 599
>BC052586-1|AAH52586.1| 901|Homo sapiens schlafen family member 11
protein.
Length = 901
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 681 LRNQKESYCMGLPGPGKTLLARAVAHHMRCTF 776
LR +E + GLPG GKT++A + +R F
Sbjct: 589 LRKNRELFVHGLPGSGKTIMAMKIMEKIRNVF 620
>BC021245-1|AAH21245.2| 122|Homo sapiens AFG3L1 protein protein.
Length = 122
Score = 31.5 bits (68), Expect = 4.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 647 VKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSPHEVYFHT 781
+K+P+ + LG PKG +L GP G K +++ V F T
Sbjct: 7 LKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEATVPFIT 51
>AL831964-1|CAD38606.2| 901|Homo sapiens hypothetical protein
protein.
Length = 901
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 681 LRNQKESYCMGLPGPGKTLLARAVAHHMRCTF 776
LR +E + GLPG GKT++A + +R F
Sbjct: 589 LRKNRELFVHGLPGSGKTIMAMKIMEKIRNVF 620
>AK127728-1|BAC87104.1| 639|Homo sapiens lucosaminyltransferase
IV-homolog (HGNT-IV-H). protein.
Length = 639
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 681 LRNQKESYCMGLPGPGKTLLARAVAHHMRCTF 776
LR +E + GLPG GKT++A + +R F
Sbjct: 331 LRKNRELFVHGLPGSGKTIMAMKIMEKIRNVF 362
>AK092241-1|BAC03835.1| 901|Homo sapiens protein ( Homo sapiens
cDNA FLJ34922 fis, clone NT2RP7003084, weakly similar to
Mus musculus schlafen3 (Slfn3) mRNA. ).
Length = 901
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 681 LRNQKESYCMGLPGPGKTLLARAVAHHMRCTF 776
LR +E + GLPG GKT++A + +R F
Sbjct: 589 LRKNRELFVHGLPGSGKTIMAMKIMEKIRNVF 620
>AK074184-1|BAB85010.1| 820|Homo sapiens FLJ00257 protein protein.
Length = 820
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 681 LRNQKESYCMGLPGPGKTLLARAVAHHMRCTF 776
LR +E + GLPG GKT++A + +R F
Sbjct: 508 LRKNRELFVHGLPGSGKTIMAMKIMEKIRNVF 539
>AK056514-1|BAB71201.1| 579|Homo sapiens protein ( Homo sapiens
cDNA FLJ31952 fis, clone NT2RP7007221, weakly similar to
Rattus norvegicus schlafen-4 (SLFN-4) mRNA. ).
Length = 579
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 681 LRNQKESYCMGLPGPGKTLLARAVAHHMRCTF 776
LR +E + GLPG GKT++A + +R F
Sbjct: 271 LRKNRELFVHGLPGSGKTIMAMKIMEKIRNVF 302
>AK054668-1|BAB70788.1| 782|Homo sapiens protein ( Homo sapiens
cDNA FLJ30106 fis, clone BNGH41000190, weakly similar to
Rattus norvegicus schlafen-4 (SLFN-4) mRNA. ).
Length = 782
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 681 LRNQKESYCMGLPGPGKTLLARAVAHHMRCTF 776
LR +E + GLPG GKT+LA + +R F
Sbjct: 568 LRKTRELFVHGLPGSGKTILALRIMEKIRNVF 599
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,484,669
Number of Sequences: 237096
Number of extensions: 2573292
Number of successful extensions: 10664
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 10159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10578
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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