Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0124
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 148 6e-36
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 143 2e-34
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 143 2e-34
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 91 8e-19
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 90 2e-18
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 80 2e-15
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 80 2e-15
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 77 2e-14
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 75 9e-14
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 72 7e-13
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 72 7e-13
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 70 2e-12
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 59 5e-09
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 55 6e-08
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 55 6e-08
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 55 6e-08
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 55 6e-08
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 55 6e-08
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 55 6e-08
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 55 6e-08
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 54 1e-07
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 51 1e-06
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 44 2e-04
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 43 3e-04
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 43 3e-04
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 37 0.018
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 37 0.018
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 37 0.018
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 36 0.041
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 36 0.041
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 36 0.054
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 31 0.87
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 31 0.87
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 31 1.5
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 31 1.5
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 31 1.5
Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical pr... 29 4.7
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 29 4.7
U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein ... 29 4.7
AL132877-18|CAC70116.1| 362|Caenorhabditis elegans Hypothetical... 29 6.2
AL032643-7|CAA21659.2| 362|Caenorhabditis elegans Hypothetical ... 29 6.2
AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear recep... 29 6.2
AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear horm... 29 6.2
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 29 6.2
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 28 8.1
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 148 bits (358), Expect = 6e-36
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +2
Query: 509 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ 688
LHK+LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ
Sbjct: 133 LHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ 192
Query: 689 PKGVLLYGPSGPWKDIIS 742
PKGVLL+GP G K +++
Sbjct: 193 PKGVLLFGPPGTGKTLLA 210
Score = 118 bits (283), Expect = 8e-27
Identities = 57/83 (68%), Positives = 65/83 (78%)
Frame = +3
Query: 255 KSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVV 434
KSQN+RRLQAQRNELN KVRML+ GSYVGEV K MDKKKVLVKVHPEGK+VV
Sbjct: 48 KSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVV 107
Query: 435 DLDKNVDINDVTANCRVALRNES 503
D+DK++DIN + RVALR +S
Sbjct: 108 DVDKSIDINSLNTGARVALRADS 130
Score = 61.3 bits (142), Expect = 9e-10
Identities = 37/69 (53%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QKFIG + A+M E L
Sbjct: 188 LGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSG-SELVQKFIG-EGARMVRE-L 244
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 245 FVMAREHAP 253
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 143 bits (346), Expect = 2e-34
Identities = 66/78 (84%), Positives = 73/78 (93%)
Frame = +2
Query: 509 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ 688
+H++LP+KVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQ
Sbjct: 128 IHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQ 187
Query: 689 PKGVLLYGPSGPWKDIIS 742
PKGVLLYGP G K +++
Sbjct: 188 PKGVLLYGPPGTGKTLLA 205
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +3
Query: 255 KSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVV 434
KS N+RRL AQ+ ELN KVR+L+ GS+VGEV K MDKKKVLVK HP+GK++V
Sbjct: 43 KSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIV 102
Query: 435 DLDKNVDINDVTANCRVALRNES 503
D+ +VDI+ + A RVALR ++
Sbjct: 103 DVAASVDISTLAAGTRVALRADN 125
Score = 60.9 bits (141), Expect = 1e-09
Identities = 37/69 (53%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QKFIG + A+M E L
Sbjct: 183 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG-SELVQKFIG-EGARMVRE-L 239
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 240 FVMAREHAP 248
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 143 bits (346), Expect = 2e-34
Identities = 66/78 (84%), Positives = 73/78 (93%)
Frame = +2
Query: 509 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQ 688
+H++LP+KVDPLVSLMMVEKVPDSTYEMVGGLD QIKEIKEVIELPVKHPELFDALGIAQ
Sbjct: 149 IHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQ 208
Query: 689 PKGVLLYGPSGPWKDIIS 742
PKGVLLYGP G K +++
Sbjct: 209 PKGVLLYGPPGTGKTLLA 226
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +3
Query: 255 KSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVV 434
KS N+RRL AQ+ ELN KVR+L+ GS+VGEV K MDKKKVLVK HP+GK++V
Sbjct: 64 KSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIV 123
Query: 435 DLDKNVDINDVTANCRVALRNES 503
D+ +VDI+ + A RVALR ++
Sbjct: 124 DVAASVDISTLAAGTRVALRADN 146
Score = 60.9 bits (141), Expect = 1e-09
Identities = 37/69 (53%), Positives = 42/69 (60%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKTLLARAVAHH CTFIR S QKFIG + A+M E L
Sbjct: 204 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSG-SELVQKFIG-EGARMVRE-L 260
Query: 855 FVMGQRNKP 881
FVM + + P
Sbjct: 261 FVMAREHAP 269
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 91.5 bits (217), Expect = 8e-19
Identities = 39/75 (52%), Positives = 55/75 (73%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+L + DP+VS+M +EK P TY VGGLD+QI+EIKE +ELP+ HPE ++ +GI PKG
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKG 224
Query: 698 VLLYGPSGPWKDIIS 742
V+LYG G K +++
Sbjct: 225 VILYGCPGTGKTLLA 239
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
+G+R K G PG GKTLLA+AVA+ TF+R GS + QK++G KM E
Sbjct: 217 MGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSEL---IQKYLG-DGPKMVRE 272
Query: 849 RLFVMGQRNKP 881
LF + + N P
Sbjct: 273 -LFRVAEENAP 282
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 90.2 bits (214), Expect = 2e-18
Identities = 41/81 (50%), Positives = 55/81 (67%)
Frame = +2
Query: 494 QRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDA 673
+ K +H LP K+DP V++M VE+ PD TY VGG QI++++EV+E P+ HPE +
Sbjct: 146 RNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVN 205
Query: 674 LGIAQPKGVLLYGPSGPWKDI 736
LGI PKGVLLYGP G K +
Sbjct: 206 LGIEPPKGVLLYGPPGTGKTL 226
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR--GSXIRNWYQKFIGRKAAKMGAE 848
LG+ K G PG GKTL ARAVA+ FIR GS + QK++G + A+M E
Sbjct: 206 LGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSEL---VQKYVG-EGARMVRE 261
Query: 849 RLFVMGQRNK 878
LF M + K
Sbjct: 262 -LFEMARTKK 270
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 80.2 bits (189), Expect = 2e-15
Identities = 40/91 (43%), Positives = 58/91 (63%)
Frame = +2
Query: 503 LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 682
L + + LP +VDPLV M E + +Y VGGL +QI+E++EV+ELP+ +PELF +GI
Sbjct: 114 LTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGI 173
Query: 683 AQPKGVLLYGPSGPWKDIISSCCRSPHEVYF 775
PKG LL+GP G K +++ S + F
Sbjct: 174 TPPKGCLLFGPPGTGKTLLARAVASQLDCNF 204
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR 782
+G+ K G PG GKTLLARAVA + C F++
Sbjct: 171 VGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLK 206
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 80.2 bits (189), Expect = 2e-15
Identities = 40/91 (43%), Positives = 58/91 (63%)
Frame = +2
Query: 503 LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 682
L + + LP +VDPLV M E + +Y VGGL +QI+E++EV+ELP+ +PELF +GI
Sbjct: 122 LTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGI 181
Query: 683 AQPKGVLLYGPSGPWKDIISSCCRSPHEVYF 775
PKG LL+GP G K +++ S + F
Sbjct: 182 TPPKGCLLFGPPGTGKTLLARAVASQLDCNF 212
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIR 782
+G+ K G PG GKTLLARAVA + C F++
Sbjct: 179 VGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLK 214
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 77.0 bits (181), Expect = 2e-14
Identities = 32/75 (42%), Positives = 50/75 (66%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+L +K+D VEK P T++ +GG + QI+E+KE +ELP+ HPE ++ +GI PKG
Sbjct: 160 VLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKG 219
Query: 698 VLLYGPSGPWKDIIS 742
V+LYG G K +++
Sbjct: 220 VILYGEPGTGKTLLA 234
Score = 37.1 bits (82), Expect = 0.018
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
+G+ K G PG GKTLLA+AVA+ TFIR + + QK G + A++ ++
Sbjct: 212 MGITAPKGVILYGEPGTGKTLLAKAVANSTSATFIRATG-SDLVQKQSG-EGARL-VRQI 268
Query: 855 FVMGQRNKP 881
F M + P
Sbjct: 269 FQMAKEQAP 277
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 74.5 bits (175), Expect = 9e-14
Identities = 30/75 (40%), Positives = 51/75 (68%)
Frame = +2
Query: 518 ILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 697
+LP + D + ++ ++ PD +Y +GGLD Q +E++E +ELP+ H EL+ +GI P+G
Sbjct: 138 VLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRG 197
Query: 698 VLLYGPSGPWKDIIS 742
VL+YGP G K +++
Sbjct: 198 VLMYGPPGCGKTMLA 212
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKT+LA+AVA + +FIR + QK++G + +M +F + + N P
Sbjct: 202 GPPGCGKTMLAKAVAANTAASFIRVVG-SEFVQKYLG-EGPRM-VRDVFRLAKENSP 255
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 74.1 bits (174), Expect = 1e-13
Identities = 39/114 (34%), Positives = 66/114 (57%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 715
DP+ E + D Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+GI P+G+LL+GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 716 SGPWKDIISSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQ 877
G K +I+ + +F +++ K+ E S++ R+A K Q
Sbjct: 253 PGTGKTLIARAVANETGSFFFL-INGPEVMSKMSGE--SESNLRKAFEECEKNQ 303
Score = 56.0 bits (129), Expect = 4e-08
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = +2
Query: 530 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 709
K P V + P++T+ +GGL +E++E+++ PV+HPE + G+ +GVL Y
Sbjct: 464 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 523
Query: 710 GPSGPWKDIISSCCRSPHEVYF 775
GP G K +++ + + F
Sbjct: 524 GPPGCGKTLLAKAIANECQANF 545
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
+ G++ + G PG GKTLLA+A+A+ + FI
Sbjct: 510 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFI 546
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 71.7 bits (168), Expect = 7e-13
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 715
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 716 SGPWKDIISSCCRSPHEVYF 775
G K +I+ + +F
Sbjct: 252 PGTGKTLIARAVANETGAFF 271
Score = 56.0 bits (129), Expect = 4e-08
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = +2
Query: 530 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 709
K P V + P++T+ +GGL +E++E+++ PV+HPE + G+ +GVL Y
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 522
Query: 710 GPSGPWKDIISSCCRSPHEVYF 775
GP G K +++ + + F
Sbjct: 523 GPPGCGKTLLAKAIANECQANF 544
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
+ G++ + G PG GKTLLA+A+A+ + FI
Sbjct: 509 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFI 545
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 71.7 bits (168), Expect = 7e-13
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 715
DP+ E + + Y+ +GG+ KQ+ +IKE++ELP++HP+LF A+G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 716 SGPWKDIISSCCRSPHEVYF 775
G K +I+ + +F
Sbjct: 252 PGTGKTLIARAVANETGAFF 271
Score = 56.0 bits (129), Expect = 4e-08
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = +2
Query: 530 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 709
K P V + P++T+ +GGL +E++E+++ PV+HPE + G+ +GVL Y
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 522
Query: 710 GPSGPWKDIISSCCRSPHEVYF 775
GP G K +++ + + F
Sbjct: 523 GPPGCGKTLLAKAIANECQANF 544
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 669 MPLGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
+ G++ + G PG GKTLLA+A+A+ + FI
Sbjct: 509 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFI 545
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 70.1 bits (164), Expect = 2e-12
Identities = 36/80 (45%), Positives = 49/80 (61%)
Frame = +2
Query: 503 LYLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 682
L L K LP + D V M V++ P Y +GG DKQI+E+ E + LP+ H + F LGI
Sbjct: 150 LILEK-LPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGI 208
Query: 683 AQPKGVLLYGPSGPWKDIIS 742
PKGVL+YGP G K +++
Sbjct: 209 HPPKGVLMYGPPGTGKTMMA 228
Score = 35.1 bits (77), Expect = 0.071
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
LG+ K G PG GKT++ARAVA + TF++ + Q FIG AK+
Sbjct: 206 LGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAG-PQLVQMFIG-DGAKL-VRDA 262
Query: 855 FVMGQRNKPPSFXF 896
F + + K P+ F
Sbjct: 263 FALA-KEKAPAIIF 275
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 58.8 bits (136), Expect = 5e-09
Identities = 37/123 (30%), Positives = 62/123 (50%)
Frame = +2
Query: 530 KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 709
++ P + +VP+ ++ +GG ++ EI++ + P KHPE F+ GI P G+LLY
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLY 499
Query: 710 GPSGPWKDIISSCCRSPHEVYFHTWFXDQKLVPKIYWEKGSQNGCREALRNGPKKQAPXF 889
GP G K +I+ S ++ F +L K W S+ R+ L + ++ AP
Sbjct: 500 GPPGCSKTLIARALASEAKMNFLA-VKGPELFSK--WVGDSEKAIRD-LFSRARQVAPTI 555
Query: 890 XFF 898
FF
Sbjct: 556 VFF 558
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
Frame = +3
Query: 690 QKESYCM----GLPGPGKTLLARAVA 755
QKES C GLPG GKTLL + VA
Sbjct: 268 QKESPCSVLIWGLPGSGKTLLLKEVA 293
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII-----SSC 748
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGP G K ++ + C
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 749 CRSPHEVYF 775
R ++V F
Sbjct: 450 RRGANKVAF 458
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII-----SSC 748
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGP G K ++ + C
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 447
Query: 749 CRSPHEVYF 775
R ++V F
Sbjct: 448 RRGANKVAF 456
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII-----SSC 748
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGP G K ++ + C
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 749 CRSPHEVYF 775
R ++V F
Sbjct: 450 RRGANKVAF 458
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII-----SSC 748
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGP G K ++ + C
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 749 CRSPHEVYF 775
R ++V F
Sbjct: 450 RRGANKVAF 458
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII-----SSC 748
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGP G K ++ + C
Sbjct: 388 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 447
Query: 749 CRSPHEVYF 775
R ++V F
Sbjct: 448 RRGANKVAF 456
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII-----SSC 748
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGP G K ++ + C
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 749 CRSPHEVYF 775
R ++V F
Sbjct: 450 RRGANKVAF 458
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDII-----SSC 748
++ VGGL I+ +KEV+ P+ +PE+F+ I PKGV+ YGP G K ++ + C
Sbjct: 390 FDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANEC 449
Query: 749 CRSPHEVYF 775
R ++V F
Sbjct: 450 RRGANKVAF 458
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISS 745
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GPSG K ++++
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLAN 780
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = +2
Query: 581 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISS 745
T E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GPSG K ++++
Sbjct: 726 TMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLAN 780
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/53 (43%), Positives = 40/53 (75%)
Frame = +2
Query: 587 EMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISS 745
E VGG+ +Q K +++VI P K+P+LF+++G+ KG+LL+GPSG K ++++
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLAN 54
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +2
Query: 593 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSPHEVY 772
V GL+ K ++E++ LP K P++F + A PKGVLL+GP G K +I C S +
Sbjct: 318 VAGLEGAKKALREIVVLPFKRPDVFTGIR-APPKGVLLFGPPGTGKTMIGRCVASQCKAT 376
Query: 773 F 775
F
Sbjct: 377 F 377
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 44.0 bits (99), Expect = 2e-04
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 536 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 712
D L +++EK P+ + + GL+ + +KE + LP+K P+LF G +P +G+LL+G
Sbjct: 102 DKLSGAIVMEK-PNVKWTDIAGLEGAKEALKEAVILPIKFPQLF--TGNRKPWQGILLFG 158
Query: 713 PSGPWKDIIS 742
P G K I+
Sbjct: 159 PPGTGKSYIA 168
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 602 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSPHEV-YFH 778
+D+ E++E+++ +K PE + LG PKGVLL GP G K +++ +V +FH
Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFH 264
Query: 779 T 781
T
Sbjct: 265 T 265
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 569 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPSGPWKDIIS 742
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GP G K +++
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLA 585
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GP G K + +
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFA 256
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFI--RGSXIRNWY 806
G PG GKTLLA+AVA+ FI +G + N Y
Sbjct: 575 GPPGCGKTLLAKAVANETGMNFISVKGPELLNMY 608
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 569 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLYGPSGPWKDIIS 742
VPD +++ +G L + K+++ I P+K + F ALGI +P+G+LL GP G K +++
Sbjct: 527 VPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLA 585
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
+E +GG D+Q E+ + + +K P+ F LG+ P+G +++GP G K + +
Sbjct: 205 FEHIGGADRQFLEVCR-LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFA 256
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
G PG GKTLLA+AVA+ F ++G + N Y
Sbjct: 575 GPPGCGKTLLAKAVANETGMNFFSVKGPELLNMY 608
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/53 (30%), Positives = 34/53 (64%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGP G K +++
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLA 131
Score = 34.7 bits (76), Expect = 0.094
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKTLLA+AVA C FI + N K+ G ++ K+ A +F + Q+ +P
Sbjct: 121 GPPGCGKTLLAKAVARAAGCRFI-NLQVSNLTDKWYG-ESQKLAA-AVFSVAQKFQP 174
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/53 (30%), Positives = 34/53 (64%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
++ +GG ++ + E+K+ I LP++ + ++ P+G+LLYGP G K +++
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLA 134
Score = 34.7 bits (76), Expect = 0.094
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERLFVMGQRNKP 881
G PG GKTLLA+AVA C FI + N K+ G ++ K+ A +F + Q+ +P
Sbjct: 124 GPPGCGKTLLAKAVARAAGCRFI-NLQVSNLTDKWYG-ESQKLAA-AVFSVAQKFQP 177
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 572 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
PD ++ +GGLD + I + V PE + LG+ +G+LL+GP G K +++
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 572 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
PD ++ +GGLD + I + V PE + LG+ +G+LL+GP G K +++
Sbjct: 288 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 347
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 572 PDSTYEM--VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIIS 742
PD ++ +GGLD + I + V PE + LG+ +G+LL+GP G K +++
Sbjct: 222 PDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMA 281
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 35.9 bits (79), Expect = 0.041
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSPH 763
++ V G + EI+E ++ +K+P F LG P+G LL GP G K +++ +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 764 EVYF 775
V F
Sbjct: 343 TVPF 346
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
LG + + + G PG GKTLLA+A+A FI
Sbjct: 313 LGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFI 347
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 35.9 bits (79), Expect = 0.041
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 584 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSPH 763
++ V G + EI+E ++ +K+P F LG P+G LL GP G K +++ +
Sbjct: 284 FKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 764 EVYF 775
V F
Sbjct: 343 TVPF 346
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 675 LGLRNQKESYCMGLPGPGKTLLARAVAHHMRCTFI 779
LG + + + G PG GKTLLA+A+A FI
Sbjct: 313 LGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFI 347
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 35.5 bits (78), Expect = 0.054
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +2
Query: 593 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISSCCRSPHEVY 772
V G ++ EI E + +K+P+ + LG PKG +L GP G K +++ V
Sbjct: 295 VAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVP 353
Query: 773 FHT 781
F T
Sbjct: 354 FIT 356
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 678 GLRNQ-KESYCMGLPGPGKTLLARAVAHHMRCTF 776
GLR+ K G PG GKTL+ARA+A TF
Sbjct: 221 GLRSPWKAMVLAGPPGTGKTLIARAIASESSSTF 254
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 678 GLRNQ-KESYCMGLPGPGKTLLARAVAHHMRCTF 776
GLR+ K G PG GKTL+ARA+A TF
Sbjct: 221 GLRSPWKAMVLAGPPGTGKTLIARAIASESSSTF 254
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 678 GLRNQ-KESYCMGLPGPGKTLLARAVAHHMRCTF 776
GLR+ K G PG GKTL+ARA+A TF
Sbjct: 221 GLRSPWKAMVLAGPPGTGKTLIARAIASESSSTF 254
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISS 745
K+P+ +E VGGL++ + + E I LF + + + G++LYG G K +I+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESI-----RTNLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 746 CCRSPHEVYF 775
+ ++ F
Sbjct: 512 AVATEFKIAF 521
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
G PG GKTL+A+AVA + F ++G + N Y
Sbjct: 500 GSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKY 533
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISS 745
K+P+ +E VGGL++ + + E I LF + + + G++LYG G K +I+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESI-----RTNLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 746 CCRSPHEVYF 775
+ ++ F
Sbjct: 512 AVATEFKIAF 521
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
G PG GKTL+A+AVA + F ++G + N Y
Sbjct: 500 GSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKY 533
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPSGPWKDIISS 745
K+P+ +E VGGL++ + + E I LF + + + G++LYG G K +I+
Sbjct: 458 KIPNVRWEDVGGLEETKQTVLESI-----RTNLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 746 CCRSPHEVYF 775
+ ++ F
Sbjct: 512 AVATEFKIAF 521
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 711 GLPGPGKTLLARAVAHHMRCTF--IRGSXIRNWY 806
G PG GKTL+A+AVA + F ++G + N Y
Sbjct: 500 GSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKY 533
>Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical
protein F36A2.9b protein.
Length = 565
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 363 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 449
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical
protein F36A2.9a protein.
Length = 528
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 363 GEVVKPMDKKKVLVKVHPEGKFVVDLDKN 449
G VV +D+K + + H EGKF+VD + N
Sbjct: 16 GSVVPNVDQKILRGEFHDEGKFMVDYEDN 44
>Z70686-2|CAA94610.1| 570|Caenorhabditis elegans Hypothetical
protein R10H10.2 protein.
Length = 570
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 470 GQLSCRSSQRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVG-GLDKQIKEI 625
G LS RS Q+ + ++P + L+ +EKV DST EM G++K ++EI
Sbjct: 44 GALSPRSMQKNI----LVPFTTQTVKYLLGLEKVSDSTDEMGWFGIEKSLEEI 92
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 29.1 bits (62), Expect = 4.7
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 678 GLRNQKESYCM-GLPGPGKTLLARAVAHHMRCTFIRGSXIRNWYQKFIGRKAAKMGAERL 854
GLR + + G PG GKTLLA+AVA + F S + K++G ++ L
Sbjct: 206 GLRQPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNIS-ASSLTSKWVG--DSEKTIRGL 262
Query: 855 FVMGQRNKPPSFXF 896
F + RN PS F
Sbjct: 263 FQIA-RNAQPSIIF 275
>U20142-2|AAB60235.1| 570|Caenorhabditis elegans SPE-26 protein
protein.
Length = 570
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 470 GQLSCRSSQRKLYLHKILPNKVDPLVSLMMVEKVPDSTYEMVG-GLDKQIKEI 625
G LS RS Q+ + ++P + L+ +EKV DST EM G++K ++EI
Sbjct: 44 GALSPRSMQKNI----LVPFTTQTVKYLLGLEKVSDSTDEMGWFGIEKSLEEI 92
>AL132877-18|CAC70116.1| 362|Caenorhabditis elegans Hypothetical
protein Y54E5A.1 protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 294 HYAGLEDDEDFEIFGDNEL*LFNLGYVV 211
HYA ED E F +G L FN+GY V
Sbjct: 233 HYAFKEDQETFSYYGLWNLCTFNVGYHV 260
>AL032643-7|CAA21659.2| 362|Caenorhabditis elegans Hypothetical
protein Y54E5A.1 protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 294 HYAGLEDDEDFEIFGDNEL*LFNLGYVV 211
HYA ED E F +G L FN+GY V
Sbjct: 233 HYAFKEDQETFSYYGLWNLCTFNVGYHV 260
>AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear receptor
NHR-18 protein.
Length = 392
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 500 KLYLHKI-LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDA 673
K Y+ K+ L N L LM + + ++ + KQI ++ ++++ HPE+F+A
Sbjct: 334 KYYVEKLKLANYSSRLTQLMRITRTLEADIR-IRIEKKQIADVFNIMKIDFSHPEMFEA 391
>AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 18 protein.
Length = 394
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 500 KLYLHKI-LPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDA 673
K Y+ K+ L N L LM + + ++ + KQI ++ ++++ HPE+F+A
Sbjct: 336 KYYVEKLKLANYSSRLTQLMRITRTLEADIR-IRIEKKQIADVFNIMKIDFSHPEMFEA 393
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 809 KIYWEKGSQNGCREALRNGPKKQAP 883
++ W+K GC AL+NGP P
Sbjct: 526 RLDWQKAVNEGCSNALQNGPLASYP 550
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +2
Query: 566 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELF---DALGIAQPKGVL-LYGPSGPWKD 733
K+P ++ VG KQI +I E K P++F A I Q K +L G +G +
Sbjct: 1249 KIPSTSQSRVGSAKKQISQIDE----QDKEPDVFVPQGAKAIYQTKRILRRSGGAGGVNE 1304
Query: 734 IISSCCRSPHEVYF 775
++ S S EV F
Sbjct: 1305 LVPSTDESDPEVAF 1318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,984,933
Number of Sequences: 27780
Number of extensions: 382970
Number of successful extensions: 1127
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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