Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0124
         (919 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.73 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.73 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.73 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.9  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   9.0  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = +2

Query: 746 CCRSPHEVYFHTW--FXDQKLVPKIY 817
           CC S   VYF TW  + +  L P IY
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPLIY 381


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = +2

Query: 746 CCRSPHEVYFHTW--FXDQKLVPKIY 817
           CC S   VYF TW  + +  L P IY
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPLIY 381


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = +2

Query: 746 CCRSPHEVYFHTW--FXDQKLVPKIY 817
           CC S   VYF TW  + +  L P IY
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPLIY 381


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 550  AHDGRESAGLYLRNGRWSRQTNQGDQRG 633
            AH    S  +  +NGR+SR  +QG   G
Sbjct: 1771 AHSRSGSQSMPRQNGRYSRVPSQGGGSG 1798


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 593 VGGLDKQIKEIKEVIELPVKHPELFD 670
           VGG    I +I  +I+LP   P + D
Sbjct: 10  VGGFCHSIIQIPVIIQLPFCGPNVID 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,182
Number of Sequences: 438
Number of extensions: 4781
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)