Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0123
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 190 1e-48
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 190 1e-48
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 189 2e-48
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 189 2e-48
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 189 2e-48
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 189 2e-48
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 186 9e-48
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 117 9e-27
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 115 3e-26
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 115 3e-26
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 114 5e-26
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 113 8e-26
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 113 1e-25
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 113 1e-25
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 111 3e-25
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 107 5e-24
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 86 2e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 86 2e-17
At4g38980.1 68417.m05523 expressed protein 31 0.97
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.2
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.0
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 28 6.8
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 28 6.8
At5g59380.1 68418.m07441 methyl-CpG-binding domain-containing pr... 27 9.0
At5g11040.1 68418.m01290 expressed protein weak similarity to hy... 27 9.0
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 9.0
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 9.0
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 190 bits (462), Expect = 1e-48
Identities = 94/145 (64%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
Frame = +2
Query: 215 FQHFLQRDRSWQALPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 394
F F + + +PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 395 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLE 574
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GGGTG G + +KSKL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 575 FAIYPRAFRFPLAVVEPYNFIL-TH 646
F IYP + AVVEPYN +L TH
Sbjct: 169 FTIYPSP-QVSTAVVEPYNSVLSTH 192
Score = 120 bits (290), Expect = 7e-28
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 252 HYP 260
H P
Sbjct: 61 HVP 63
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 190 bits (462), Expect = 1e-48
Identities = 94/145 (64%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
Frame = +2
Query: 215 FQHFLQRDRSWQALPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 394
F F + + +PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 395 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLE 574
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GGGTG G + +KSKL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 575 FAIYPRAFRFPLAVVEPYNFIL-TH 646
F IYP + AVVEPYN +L TH
Sbjct: 169 FTIYPSP-QVSTAVVEPYNSVLSTH 192
Score = 120 bits (290), Expect = 7e-28
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 252 HYP 260
H P
Sbjct: 61 HVP 63
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 189 bits (460), Expect = 2e-48
Identities = 94/145 (64%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
Frame = +2
Query: 215 FQHFLQRDRSWQALPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 394
F F + + +PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 395 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLE 574
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGTG G + +KSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 575 FAIYPRAFRFPLAVVEPYNFIL-TH 646
F +YP + +VVEPYN +L TH
Sbjct: 169 FTVYPSP-QVSTSVVEPYNSVLSTH 192
Score = 138 bits (333), Expect = 4e-33
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 252 HYP 260
H P
Sbjct: 61 HVP 63
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 189 bits (460), Expect = 2e-48
Identities = 94/145 (64%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
Frame = +2
Query: 215 FQHFLQRDRSWQALPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 394
F F + + +PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 395 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLE 574
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGTG G + +KSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 575 FAIYPRAFRFPLAVVEPYNFIL-TH 646
F +YP + +VVEPYN +L TH
Sbjct: 169 FTVYPSP-QVSTSVVEPYNSVLSTH 192
Score = 138 bits (333), Expect = 4e-33
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 252 HYP 260
H P
Sbjct: 61 HVP 63
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 189 bits (460), Expect = 2e-48
Identities = 94/145 (64%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
Frame = +2
Query: 215 FQHFLQRDRSWQALPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 394
F F + + +PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 395 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLE 574
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGTG G + +KSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 575 FAIYPRAFRFPLAVVEPYNFIL-TH 646
F +YP + +VVEPYN +L TH
Sbjct: 169 FTVYPSP-QVSTSVVEPYNSVLSTH 192
Score = 139 bits (336), Expect = 2e-33
Identities = 55/63 (87%), Positives = 62/63 (98%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 252 HYP 260
H P
Sbjct: 61 HVP 63
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 189 bits (460), Expect = 2e-48
Identities = 94/145 (64%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
Frame = +2
Query: 215 FQHFLQRDRSWQALPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 394
F F + + +PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 395 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLE 574
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGTG G + +KSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 575 FAIYPRAFRFPLAVVEPYNFIL-TH 646
F +YP + +VVEPYN +L TH
Sbjct: 169 FTVYPSP-QVSTSVVEPYNSVLSTH 192
Score = 139 bits (336), Expect = 2e-33
Identities = 55/63 (87%), Positives = 62/63 (98%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 252 HYP 260
H P
Sbjct: 61 HVP 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 186 bits (454), Expect = 9e-48
Identities = 92/145 (63%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Frame = +2
Query: 215 FQHFLQRDRSWQALPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 394
F F S Q +PRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 395 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLE 574
T+G+EIVD L+R+RKLAD CTGLQGFL+F++ GGGTG G + +KSKL
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLG 168
Query: 575 FAIYPRAFRFPLAVVEPYNFIL-TH 646
F IYP + AVVEPYN +L TH
Sbjct: 169 FTIYPSP-QVSTAVVEPYNSVLSTH 192
Score = 115 bits (277), Expect = 3e-26
Identities = 45/63 (71%), Positives = 55/63 (87%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 252 HYP 260
H P
Sbjct: 61 HVP 63
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 117 bits (281), Expect = 9e-27
Identities = 58/130 (44%), Positives = 79/130 (60%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
+PRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 119
Query: 434 IRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFPLA 613
+RK A+ C LQGF + HS GGGTG G S + L F+++P +
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 614 VVEPYNFILT 643
VVEPYN L+
Sbjct: 179 VVEPYNATLS 188
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 242
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 243 AGKHYP 260
G++ P
Sbjct: 56 CGRYVP 61
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 115 bits (277), Expect = 3e-26
Identities = 58/130 (44%), Positives = 79/130 (60%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
+PRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 434 IRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFPLA 613
+RK A+ C LQGF + HS GGGTG G S + L F+++P +
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 614 VVEPYNFILT 643
VVEPYN L+
Sbjct: 179 VVEPYNATLS 188
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 252 HYP 260
P
Sbjct: 59 FVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 115 bits (277), Expect = 3e-26
Identities = 57/130 (43%), Positives = 79/130 (60%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
+PRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 434 IRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFPLA 613
+RK A+ C LQGF + HS GGGTG G S + L F+++P +
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 179
Query: 614 VVEPYNFILT 643
VVEPYN L+
Sbjct: 180 VVEPYNATLS 189
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 252 HYP 260
+ P
Sbjct: 60 YVP 62
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 114 bits (275), Expect = 5e-26
Identities = 57/130 (43%), Positives = 79/130 (60%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
+PRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 434 IRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFPLA 613
+RK A+ C LQGF + HS GGGTG G S + + F+++P +
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSP-KVSDT 178
Query: 614 VVEPYNFILT 643
VVEPYN L+
Sbjct: 179 VVEPYNATLS 188
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 252 HYP 260
+ P
Sbjct: 59 YVP 61
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 113 bits (273), Expect = 8e-26
Identities = 56/130 (43%), Positives = 79/130 (60%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
+PRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 434 IRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFPLA 613
+RK A+ C LQGF + HS GGGTG G S + L F+++P +
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 179
Query: 614 VVEPYNFILT 643
VVEPYN L+
Sbjct: 180 VVEPYNATLS 189
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 252 HYP 260
+ P
Sbjct: 60 YVP 62
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 113 bits (271), Expect = 1e-25
Identities = 57/130 (43%), Positives = 78/130 (60%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
+PRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 434 IRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFPLA 613
+RK A+ C LQGF + HS GGGTG G S + L F+++P +
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 614 VVEPYNFILT 643
VVEPYN L+
Sbjct: 179 VVEPYNATLS 188
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 252 HYP 260
P
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 113 bits (271), Expect = 1e-25
Identities = 57/130 (43%), Positives = 78/130 (60%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
+PRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 434 IRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFPLA 613
+RK A+ C LQGF + HS GGGTG G S + L F+++P +
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 614 VVEPYNFILT 643
VVEPYN L+
Sbjct: 179 VVEPYNATLS 188
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 252 HYP 260
P
Sbjct: 59 FVP 61
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 111 bits (268), Expect = 3e-25
Identities = 55/130 (42%), Positives = 79/130 (60%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
+PRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 434 IRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFPLA 613
+RK A+ C LQGF + HS GGGTG G S + + F+++P +
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSP-KVSDT 178
Query: 614 VVEPYNFILT 643
VVEPYN L+
Sbjct: 179 VVEPYNATLS 188
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 252 HYP 260
+ P
Sbjct: 59 YVP 61
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 107 bits (258), Expect = 5e-24
Identities = 54/130 (41%), Positives = 78/130 (60%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 433
+PRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 434 IRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFPLA 613
+RK A+ LQGF + HS GGGTG G S + + F+++P +
Sbjct: 120 VRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSP-KVSDT 178
Query: 614 VVEPYNFILT 643
VVEPYN L+
Sbjct: 179 VVEPYNATLS 188
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 252 HYP 260
+ P
Sbjct: 59 YVP 61
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVL 427
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 428 DRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFP 607
D I + AD L+GF++ HS GGTG G Y ++K ++++P
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 608 LAVVEPYNFILT 643
VV+PYN +LT
Sbjct: 180 DVVVQPYNSLLT 191
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +3
Query: 75 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 254
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +H
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQAD-DQH 59
Query: 255 Y 257
Y
Sbjct: 60 Y 60
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Frame = +2
Query: 254 LPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVL 427
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 428 DRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY*WSVSPLTTARKSKLEFAIYPRAFRFP 607
D I + AD L+GF++ HS GGTG G Y ++K ++++P
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 608 LAVVEPYNFILT 643
VV+PYN +LT
Sbjct: 180 DVVVQPYNSLLT 191
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +3
Query: 75 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 254
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +H
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQAD-DQH 59
Query: 255 Y 257
Y
Sbjct: 60 Y 60
>At4g38980.1 68417.m05523 expressed protein
Length = 280
Score = 30.7 bits (66), Expect = 0.97
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Frame = -1
Query: 493 EGVEDQESLQTGTLVSELADSVQNQIY--DFLS----NXXXXXXXXXGRIFLTSNKLFWM 332
E +E+ S+ G E SV +Q++ DF+S + + +TS ++F +
Sbjct: 156 ESIEEDGSVSNGEAKEEKPASVSSQVFKDDFMSTYVEDNAEDCNVTEDPVKVTSQEIFKV 215
Query: 331 KQLSVCASAD----LINNSRFKIDEDSTG*CLPAPVSLKKVLKESS 206
L V D L+ + +DE ST LP P++ +V+ E S
Sbjct: 216 WDLEVVGDNDEEDGLVLQLKKALDESSTVQPLPQPLNDDQVVSEKS 261
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 508 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 410
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 241 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 116
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 157 ASSLMARCPQTRPSGVETILSTLSSARPELASTTP 261
AS+ +R P + + TI ++S++ PEL+S TP
Sbjct: 862 ASNKKSRVPLPKANEKSTISRSVSTSSPELSSNTP 896
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 178 CPQTRPSGVETILSTLSSARPELASTTPCCLRRS*TYCC**GPHWH 315
CP R SG+ + + LS++ E ST CC++ +C WH
Sbjct: 242 CPNPRCSGLMS-KTELSTSTEEDVSTRTCCVKCGEPFCINCKVPWH 286
>At5g59380.1 68418.m07441 methyl-CpG-binding domain-containing
protein similar to testis specific methyl-CpG binding
protein MBD2 [Homo sapiens] GI:3800801; contains Pfam
profile PF01429: Methyl-CpG binding domain
Length = 225
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 513 PRPVPPPKEWKIRNPCRPVHWS 448
P P PPP ++ +NP V WS
Sbjct: 161 PPPPPPPLDFDFKNPPDKVSWS 182
>At5g11040.1 68418.m01290 expressed protein weak similarity to
hypercellular protein [Aspergillus nidulans] GI:9309269
Length = 1186
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 118 SVMPAGS-FTAWSTASSLMA-RCPQTRPSGVETILSTLSSARPELASTTPC 264
S + AG AWS A+ L+ P PSG + ++L+++ L S T C
Sbjct: 458 SAVRAGDPLAAWSAAARLLRWHYPLITPSGQNGLANSLANSADRLPSGTRC 508
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 9.0
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 440 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 351
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 9.0
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 440 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 351
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,822,861
Number of Sequences: 28952
Number of extensions: 388435
Number of successful extensions: 1277
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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