Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0121
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0690 + 26303733-26306540 33 0.18
06_01_0931 + 7192519-7194075 32 0.43
09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238 31 0.56
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 31 0.74
06_01_0568 - 4015749-4015923,4016315-4016433 31 0.98
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 31 0.98
03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648 31 0.98
11_06_0610 - 25449085-25453284 30 1.3
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 30 1.3
01_01_0917 + 7238721-7239078,7239590-7239957 30 1.3
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 30 1.7
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 29 2.3
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 29 3.0
05_06_0127 - 25845253-25845351,25845506-25845569,25845962-258461... 29 3.0
01_07_0349 + 42939178-42939551,42939752-42939904,42940289-42940982 29 3.0
08_02_0909 - 22515326-22515418,22515992-22516150,22516583-225166... 29 4.0
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 29 4.0
03_05_0528 - 25268396-25269217 29 4.0
03_05_0732 - 27232299-27232535,27232717-27232746,27233094-272331... 28 5.2
02_01_0276 - 1838028-1838098,1838543-1838864 28 5.2
11_06_0228 + 21497248-21498143,21499831-21501700,21501934-215020... 27 9.2
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 27 9.2
08_01_0910 + 8968896-8968932,8969111-8969181,8970417-8970740,897... 27 9.2
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 27 9.2
05_07_0100 + 27679280-27680320 27 9.2
05_04_0319 + 20171486-20171800,20171882-20171956,20172160-201721... 27 9.2
05_03_0441 - 14037497-14038006,14038208-14038369 27 9.2
05_01_0245 - 1829921-1830359,1830449-1831002,1832016-1832144,183... 27 9.2
04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412 27 9.2
02_05_0827 - 32051086-32051445 27 9.2
01_06_1431 + 37317248-37317907 27 9.2
>11_06_0690 + 26303733-26306540
Length = 935
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 362 PQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVIVHGHVAFQTACIHAVTGT 535
P L T + + S A PPP LR L G + P+IV+ AC V+GT
Sbjct: 707 PNLCTLDPEKEVESEAGIFEPPPALRAQLSGPVQCGSPLIVYERRRESLACHALVSGT 764
>06_01_0931 + 7192519-7194075
Length = 518
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 353 PSGPQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVIVHGHVAFQTACIHA 523
PS P + + +S+ PS + PP + G + A DPV+V F+ ACI A
Sbjct: 10 PSSPPMPSSSSSS--PSSSFTADPPAEFLCPISGTLMA-DPVVVPPGQTFERACIQA 63
>09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238
Length = 472
Score = 31.5 bits (68), Expect = 0.56
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 318 SALRKASSVTAYRLARSCPQVQA--PEHSHHQLHDAS-LPPACEQVFGGISP 464
S+ +SSV R+ + P A H HHQ+ A L P +Q FGG SP
Sbjct: 351 SSPANSSSVDVSRMVQPSPAAAAGAEHHHHHQIPMAQPLVPNLQQQFGGSSP 402
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 31.1 bits (67), Expect = 0.74
Identities = 27/89 (30%), Positives = 40/89 (44%)
Frame = +3
Query: 276 TTSLTMTSGYLMERSALRKASSVTAYRLARSCPQVQAPEHSHHQLHDASLPPACEQVFGG 455
T LT T+GY + +A+ TA + A S +HS L ++PP
Sbjct: 161 TPPLT-TTGYSTDEED--QATYYTAPKTAMSSFSRSTSQHS--TLEQTAMPPMAAPAPPQ 215
Query: 456 ISPLRTLSLFMDMSPFRQRVFTPLPAQTP 542
+P R + P RQR+ PLPA++P
Sbjct: 216 TNPPRPVRPPPPPPPPRQRLLRPLPAESP 244
>06_01_0568 - 4015749-4015923,4016315-4016433
Length = 97
Score = 30.7 bits (66), Expect = 0.98
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 433 AGGRDASC-SW*WECSGACTCGQLRARRYAVTELAFRSADLSIR*PEVIV 287
A GRDAS SW +C GA + RAR A + +R+ +R PEV V
Sbjct: 10 AHGRDASFGSWWKKCFGAKARAEERARVRAGESVTWRTQPDGLRLPEVAV 59
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 361 PAAVHRCKRPNTPITSC-TMHPSPPPANRSSGEYR 462
P HRC P+ +C T P+PP SS E R
Sbjct: 328 PRLTHRCSTTTQPLPTCGTPAPAPPAGQPSSAEDR 362
>03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648
Length = 365
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 429 PACEQVFGGISPLRTLSLFMDMSPFRQRVFTPLPAQTPLKICTKLVI*DEGMAAFGA 599
PA G ++ + + ++F M +QR+ T + C + V+ DEG+ AF A
Sbjct: 137 PAAHAASGVLATIASDAVFTPMDTVKQRLQLTSSPYTGVSHCVRTVLRDEGLGAFFA 193
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 344 NSVPSGPQLSTGASARTLPSPAARCIPPPRLR 439
+S PS P+ S+ + ++LP PA +PPP ++
Sbjct: 1103 SSPPSVPKASSPPTEKSLPPPATVSLPPPTVK 1134
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 362 PQLSTGASARTLPSPAARCIPPPRLRTG-LRGNIA 463
PQ + G+ A L + R PPPRLRT L G +A
Sbjct: 169 PQATAGSPAARLAARRLRTSPPPRLRTSRLAGAVA 203
>01_01_0917 + 7238721-7239078,7239590-7239957
Length = 241
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 293 DFRLPNGKICTSESEFGNSVPSGPQLSTGASARTLPSPAARCIPPPRLRTG 445
D P + + GN + +G + G+S +L SP A PPP LRTG
Sbjct: 128 DTNPPTRTLAMVGTSSGNGLSNGDD-NYGSSIFSLKSPLAWTQPPPSLRTG 177
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 374 TGASARTLPSPAARCIPPPRLRTGLRGNI---AAQDPVIVHGHV-AFQTA 511
T A PSP PPP G+ G + A P +V G+V +F T+
Sbjct: 285 TAAGVVAAPSPVTSLAPPPATAVGVSGGVRAPAEPPPAVVMGNVMSFSTS 334
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +1
Query: 412 TMHPSPPPANRSSGEYRRSGPCHCS---WT 492
T PPP NR +R S PC C+ WT
Sbjct: 127 TSDRQPPPMNRRMRHHRASAPCPCADVLWT 156
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 379 CKRPNTPITSCTMHPSPPPA 438
CK PI+ CT P+PPPA
Sbjct: 104 CKVQAPPISQCTAVPTPPPA 123
>05_06_0127 -
25845253-25845351,25845506-25845569,25845962-25846109,
25846224-25846486,25847065-25847209,25847300-25847639
Length = 352
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -3
Query: 553 QIFSGVCAGNGVNTRCLKGDMSMNNDRVLSGDIPPK 446
+IFSG+ G GV T + + + DR+L+GDIP K
Sbjct: 267 KIFSGLLDGTGVYTLVYEDN---DGDRMLAGDIPWK 299
>01_07_0349 + 42939178-42939551,42939752-42939904,42940289-42940982
Length = 406
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 320 CTSESEFGNSVPSGPQLSTGASARTLP 400
CTS++E+G+S + P S S+ T P
Sbjct: 366 CTSDNEYGSSASASPSSSVSVSSWTTP 392
>08_02_0909 -
22515326-22515418,22515992-22516150,22516583-22516658,
22517980-22518141,22518826-22519259,22519723-22521414
Length = 871
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 267 ETVTTSLTMTSGYLMER--SALRKASSVTAYRLARSC 371
E V L + GYL E + + KA ++TAY +AR+C
Sbjct: 765 EAVYRFLEQSGGYLTELCLNNVEKAGNLTAYAIARNC 801
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +3
Query: 360 ARSCPQVQAPEHSHHQLHDASLPPACEQVFGGISPLRTLSLFMDMSPFRQRVFTPLP 530
A + P++ P S + +S P Q FGG +PLR L L P R F P P
Sbjct: 113 AAAQPEMSWPRGSPPRCPSSSCPEPQRQEFGGGNPLRRLPLV--SPPPRPADFPPRP 167
>03_05_0528 - 25268396-25269217
Length = 273
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 216 CYIEANGFYLGKLAVFSETVTTSLTMTSGYLMERSALRKASSVTAYR 356
C + + F+LG L V T + G+++ R RK S A+R
Sbjct: 33 CATKESEFHLGTLKVLRNQTDTDREVPFGWILPRLIARKGSVTLAFR 79
>03_05_0732 -
27232299-27232535,27232717-27232746,27233094-27233155,
27233975-27234005,27234618-27234713,27234881-27234969,
27235687-27236263
Length = 373
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 296 FRLPNGKICTSESEFGNSVPSGPQLSTGASART--LPSPAARCIP 424
FRLP ++FG P+ P G+S+ + P P++R IP
Sbjct: 136 FRLPAPSPSPPVTDFGEFSPTMPLFEVGSSSGSGGFPGPSSRMIP 180
>02_01_0276 - 1838028-1838098,1838543-1838864
Length = 130
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 437 AGGGEGCIVQLVMGVFGRLHLWTAAGQTVRCYRTRFPKC 321
A CI+ L++ G+L L +A + RCY P C
Sbjct: 8 AATAAACILLLILLTSGQLQLASAESEIGRCYDDCLPDC 46
>11_06_0228 +
21497248-21498143,21499831-21501700,21501934-21502038,
21502139-21502232,21502335-21502363
Length = 997
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 317 ICTSESEFGNSVPSGPQLSTGASARTLPSPA 409
I T E G+S PSG + +TGA P A
Sbjct: 12 IITRNRELGSSEPSGMEFATGAMGTLFPKLA 42
>08_02_0824 +
21561699-21562415,21563294-21563362,21563424-21563459,
21564533-21564600,21565259-21565277,21565662-21565763,
21566173-21566288,21566501-21566595,21568093-21568264,
21568413-21568493,21569732-21569801,21570106-21570132
Length = 523
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 353 PSGPQLSTGASARTLPSPAARCIPPPRL 436
P GP T +S+ +LPS R PPPRL
Sbjct: 4 PPGPAPGTSSSSSSLPSRRRR-RPPPRL 30
>08_01_0910 +
8968896-8968932,8969111-8969181,8970417-8970740,
8972878-8972934,8974578-8974641,8974749-8974810
Length = 204
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 364 AAVHRCKRPNTPITSCTMHPSP 429
A +HRC NTP+ C HP P
Sbjct: 4 AQLHRC---NTPVQGCYSHPMP 22
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +1
Query: 385 RPNTPITSCTMHPSPPPANR--SSGEYRRSG 471
RPN P+ P PPP N + E RR G
Sbjct: 574 RPNRPVGMAPFMPPPPPPNNRGTKREQRRPG 604
>05_07_0100 + 27679280-27680320
Length = 346
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 359 GPQLSTGASARTLPSPAARCIPPP 430
GP LS AS R PSP+ +PPP
Sbjct: 130 GPTLSASASKRPSPSPSP--VPPP 151
>05_04_0319 +
20171486-20171800,20171882-20171956,20172160-20172195,
20172302-20172413,20173082-20173152,20173287-20173417,
20173718-20173783,20174003-20174103,20174311-20174370,
20174463-20174496,20174852-20174950,20175019-20175078,
20175700-20175874,20175900-20175950,20176603-20176632
Length = 471
Score = 27.5 bits (58), Expect = 9.2
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +3
Query: 30 ILEDKSGAIIELKENGQAILNGASKGFPIIEKDVFAFRQPSNRI--GVGSLYGLMVFCTS 203
IL+D ++ L E ++NG+S+G P++ P + + GV Y L V T
Sbjct: 64 ILKDAFQRMVTLIELDH-VINGSSQGLPLLAGVNVVVHLPGDELNFGVDESYNLSVPATG 122
Query: 204 KLEVCYIEANGFY--LGKLAVFSETVTTSLT 290
IEA + L L FS+ T
Sbjct: 123 SPIYAQIEAQTVFGALHALETFSQLCNFDFT 153
>05_03_0441 - 14037497-14038006,14038208-14038369
Length = 223
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +2
Query: 368 LSTGASAR--TLPSPA-ARCIPPPRLRTGLRGN 457
LS GASA+ TLPSPA ARC P R RG+
Sbjct: 102 LSLGASAQATTLPSPALARCGTPRPRRPPPRGS 134
>05_01_0245 -
1829921-1830359,1830449-1831002,1832016-1832144,
1832249-1832339,1832646-1832758,1832836-1833079,
1833193-1833281,1833357-1833424,1833790-1833874,
1834038-1834190
Length = 654
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 388 PNTPITSCTMHPSPPPANRS-SGEYRRSGP 474
P P+ S HP PP + E++R+GP
Sbjct: 382 PEAPLASDMAHPPPPKTEKELVDEWKRAGP 411
>04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412
Length = 184
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = +1
Query: 409 CTMHPSPPP-----ANRSSGEYRRSGPCHC 483
C HP PPP A + G S PCHC
Sbjct: 128 CDCHPKPPPPAPAPAKPACGCPAWSSPCHC 157
>02_05_0827 - 32051086-32051445
Length = 119
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 398 PSPAARCIPPPRLRTGLRGNIAA 466
P+ AARC P PRL G G AA
Sbjct: 78 PAAAARCPPDPRLSAGFGGWPAA 100
>01_06_1431 + 37317248-37317907
Length = 219
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 353 PSGPQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVI 481
P P S+ +++ T SPAA PPRL + AA P I
Sbjct: 92 PFSPPPSSSSNSSTTASPAAAAAAPPRLIPTIPRPAAALAPHI 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,748,329
Number of Sequences: 37544
Number of extensions: 429795
Number of successful extensions: 1988
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1975
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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