Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0121
         (624 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr...    36   0.088
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1...    36   0.088
AF233450-1|AAK82958.1| 2341|Homo sapiens pecanex-like protein 1 ...    32   1.4  
AB023212-1|BAA76839.1| 1014|Homo sapiens KIAA0995 protein protein.     32   1.4  
AK124174-1|BAC85795.1|  184|Homo sapiens protein ( Homo sapiens ...    31   2.5  
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot...    31   3.3  
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot...    31   3.3  
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ...    31   3.3  
AB037721-1|BAA92538.1| 1820|Homo sapiens KIAA1300 protein protein.     31   4.4  
AK001018-1|BAA91468.1|  238|Homo sapiens protein ( Homo sapiens ...    30   5.8  
AJ242655-1|CAB65089.2|  722|Homo sapiens putative intermediate f...    30   5.8  
AF303581-1|AAK09094.1|  722|Homo sapiens SPIN90 protein.               30   5.8  
AF178432-1|AAF35985.1|  722|Homo sapiens SH3 protein protein.          30   5.8  
AB011165-1|BAA25519.2| 2005|Homo sapiens KIAA0593 protein protein.     30   7.6  

>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
            protein.
          Length = 5405

 Score = 36.3 bits (80), Expect = 0.088
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = +2

Query: 275  NNEPYDDFRLPNGKICTSESEFGNSVPSGPQLSTGASARTLPSPAARCIP----PPRL 436
            N +P DDF+ PNG    + +EFGNS       S      T P  +  CIP    PP L
Sbjct: 2595 NGDPKDDFQKPNGSQAGNANEFGNSWEEVVPDSPCLPPPTCPPGSEGCIPSEECPPEL 2652



 Score = 36.3 bits (80), Expect = 0.088
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = +2

Query: 275  NNEPYDDFRLPNGKICTSESEFGNSVPSGPQLSTGASARTLPSPAARCIP----PPRL 436
            N +P DDF+ PNG    + +EFGNS       S      T P  +  CIP    PP L
Sbjct: 3796 NGDPKDDFQKPNGSQAGNANEFGNSWEEVVPDSPCLPPPTCPPGSEGCIPSEECPPEL 3853



 Score = 34.3 bits (75), Expect = 0.36
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = +2

Query: 275  NNEPYDDFRLPNGKICTSESEFGNSVPSGPQLSTGASARTLPSPAARCIP----PPRL 436
            N +P DDF+ PNG    + +EFGNS       S        P  +  CIP    PP L
Sbjct: 1394 NGDPKDDFQKPNGSQAGNANEFGNSWEEVVPDSPCLPPTPCPPGSEDCIPSHKCPPEL 1451


>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
            1-2843] protein.
          Length = 2843

 Score = 36.3 bits (80), Expect = 0.088
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = +2

Query: 275  NNEPYDDFRLPNGKICTSESEFGNSVPSGPQLSTGASARTLPSPAARCIP----PPRL 436
            N +P DDF+ PNG    + +EFGNS       S      T P  +  CIP    PP L
Sbjct: 2595 NGDPKDDFQKPNGSQAGNANEFGNSWEEVVPDSPCLPPPTCPPGSEGCIPSEECPPEL 2652



 Score = 34.3 bits (75), Expect = 0.36
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = +2

Query: 275  NNEPYDDFRLPNGKICTSESEFGNSVPSGPQLSTGASARTLPSPAARCIP----PPRL 436
            N +P DDF+ PNG    + +EFGNS       S        P  +  CIP    PP L
Sbjct: 1394 NGDPKDDFQKPNGSQAGNANEFGNSWEEVVPDSPCLPPTPCPPGSEDCIPSHKCPPEL 1451


>AF233450-1|AAK82958.1| 2341|Homo sapiens pecanex-like protein 1
           protein.
          Length = 2341

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 375 QVQAPEHSHHQLHDASLPPACEQVFGGISPLRTLSLFMDMSP 500
           +V  P H+HH   D SL  AC+     + PL + S   D  P
Sbjct: 239 KVNLPSHNHHHHVDQSLSSACDTEVASLVPLHSHSYRKDHRP 280


>AB023212-1|BAA76839.1| 1014|Homo sapiens KIAA0995 protein protein.
          Length = 1014

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 375 QVQAPEHSHHQLHDASLPPACEQVFGGISPLRTLSLFMDMSP 500
           +V  P H+HH   D SL  AC+     + PL + S   D  P
Sbjct: 387 KVNLPSHNHHHHVDQSLSSACDTEVASLVPLHSHSYRKDHRP 428


>AK124174-1|BAC85795.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42180 fis, clone THYMU2031258, moderately
           similar to Homo sapiens oxysterol-binding
           protein-related protein ).
          Length = 184

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 400 ITSCTMHPSPPPANRSSGEYRRSGPCHCSWTC 495
           +TSC+M PS P ++  +  +RRS      W+C
Sbjct: 1   MTSCSMAPSTPSSSSGAKAWRRSPEAPSPWSC 32


>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein
           protein.
          Length = 2442

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 388 PNTPITSCTMHPSPPPANRSSG 453
           P  P+T   +HP+PPPA+ ++G
Sbjct: 844 PCPPVTQSPLHPTPPPASTAAG 865


>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein
           protein.
          Length = 2442

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 388 PNTPITSCTMHPSPPPANRSSG 453
           P  P+T   +HP+PPPA+ ++G
Sbjct: 844 PCPPVTQSPLHPTPPPASTAAG 865


>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
           protein.
          Length = 2472

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 388 PNTPITSCTMHPSPPPANRSSG 453
           P  P+T   +HP+PPPA+ ++G
Sbjct: 874 PCPPVTQSPLHPTPPPASTAAG 895


>AB037721-1|BAA92538.1| 1820|Homo sapiens KIAA1300 protein protein.
          Length = 1820

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 20/57 (35%), Positives = 23/57 (40%)
 Frame = +3

Query: 246  GKLAVFSETVTTSLTMTSGYLMERSALRKASSVTAYRLARSCPQVQAPEHSHHQLHD 416
            G L   S    + LT T+G       L +A       L  SC    APEH HH L D
Sbjct: 1200 GGLQHLSPCPVSELTDTAGLRGSALGLPQACQPEEL-LCFSCQMCMAPEHQHHSLRD 1255


>AK001018-1|BAA91468.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10156 fis, clone HEMBA1003447. ).
          Length = 238

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 387 PEHSHHQLHDASLPPACEQVFGGISPLRTLSLFMDMSPFRQRVFTPLPAQTPLKICTK 560
           P  SH +    +L   C Q F    PLRT++L +   P  +R+ TP P Q  L+   +
Sbjct: 31  PVVSHQETSVGALGSLCRQ-FQRRLPLRTVNLNLRAGPSWKRLETPEPGQQGLQAAAR 87


>AJ242655-1|CAB65089.2|  722|Homo sapiens putative intermediate
           filaments interacting protein protein.
          Length = 722

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 299 RLPNGKICTSESEFGNSVPSGPQLSTGASARTLPSPAARCIPPPR 433
           R PNG +C +  E  +S+PS   L        +P P+++  P PR
Sbjct: 132 RQPNG-VCRAGFERQHSLPSSEHLGADGGLYQIPLPSSQIPPQPR 175


>AF303581-1|AAK09094.1|  722|Homo sapiens SPIN90 protein.
          Length = 722

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 299 RLPNGKICTSESEFGNSVPSGPQLSTGASARTLPSPAARCIPPPR 433
           R PNG +C +  E  +S+PS   L        +P P+++  P PR
Sbjct: 132 RQPNG-VCRAGFERQHSLPSSEHLGADGGLYQIPLPSSQIPPQPR 175


>AF178432-1|AAF35985.1|  722|Homo sapiens SH3 protein protein.
          Length = 722

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 299 RLPNGKICTSESEFGNSVPSGPQLSTGASARTLPSPAARCIPPPR 433
           R PNG +C +  E  +S+PS   L        +P P+++  P PR
Sbjct: 132 RQPNG-VCRAGFERQHSLPSSEHLGADGGLYQIPLPSSQIPPQPR 175


>AB011165-1|BAA25519.2| 2005|Homo sapiens KIAA0593 protein protein.
          Length = 2005

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +2

Query: 326  SESEFGNSVPSGPQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVIVHGHVAFQ 505
            + + FG    S P  ++GA    LPSP+    P PR     R    A  P    G V ++
Sbjct: 811  THTSFGMPPSSAPPSNSGAGI--LPSPSTPRFPTPRTPRTPRTPRGAGGPASAQGSVKYE 868

Query: 506  TACIHAVTGT 535
             + +++   T
Sbjct: 869  NSDLYSPAST 878


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,747,977
Number of Sequences: 237096
Number of extensions: 2166956
Number of successful extensions: 8469
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8442
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)