Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0120
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.62 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   7.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   7.6  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   7.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   7.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +3

Query: 189 EDPDRKWCY*NTARGNARKIYREKKDETPPPKEMRAVVLTGFGGLKTVKILKKPEP 356
           ++PD KW   ++++   R  YR   D     K   A   T    L  VK++    P
Sbjct: 223 DEPDHKWKKNDSSKKKTRYYYRSVDDVIEKGKRPGAFRTTLGSELSKVKVIDMTGP 278


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 96  HLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 200
           HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 167 HLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 96  HLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 200
           HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 167 HLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +3

Query: 552 PSTALGPSWCLYRPSTCTRCPKE 620
           PS   GP  CL       RC +E
Sbjct: 59  PSICCGPFGCLVGTPETLRCQRE 81


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 497 LDFTSAFEAQDERSLRWRVDGALTNYQILEV*AAGFHAN 381
           + F+S    +  RSL     GALT + ++     G H N
Sbjct: 353 IKFSSFGMLKISRSLLTSFGGALTTFLVILFQYGGIHGN 391


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 306 TGFGGLKTVKIL 341
           TG GGL+ +K+L
Sbjct: 217 TGLGGLQNIKVL 228


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 96  HLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 200
           HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 167 HLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,145
Number of Sequences: 336
Number of extensions: 3922
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)