Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0120
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            27   0.77 
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        26   1.4  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   1.8  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   9.5  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 701  VKLAISKKQQIGHHVVRGDGNKH 633
            +K  + K +QIG+HV R D  +H
Sbjct: 2913 IKEKVGKMKQIGYHVSRNDVTQH 2935


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 229 EETPEKSTERKRMRPHRPRKCAP*YLPAS-GVSRPLRY 339
           ++T  KST  K  R    RK A    PA+ GV +P RY
Sbjct: 3   KQTARKSTGGKAPRKQLARKAARKSAPATGGVKKPHRY 40


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 412 WKFRPQAFTRIRTSPSPTVGSGFLSILTVLRPPKPVSTTARIS 284
           + F+P A     T  + T  S  LS +T   P  PV TTAR S
Sbjct: 798 YTFKPFASRLRATESTATESSSTLSTVTTTLP--PVVTTARFS 838


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 512 HFANLLDFTSAFEAQDER 459
           H ANLL+F     A+D+R
Sbjct: 165 HIANLLEFIRIVPARDDR 182


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,147
Number of Sequences: 2352
Number of extensions: 16983
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)