Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0120
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF036693-7|AAO61432.1| 343|Caenorhabditis elegans Hypothetical ... 29 3.3
AF036693-6|AAK29792.1| 428|Caenorhabditis elegans Hypothetical ... 29 3.3
AC090999-6|AAK26143.2| 214|Caenorhabditis elegans Hypothetical ... 28 5.8
U88172-11|AAB42257.1| 390|Caenorhabditis elegans Hypothetical p... 28 7.7
U88172-10|AAM97988.1| 437|Caenorhabditis elegans Hypothetical p... 28 7.7
AF125954-2|AAK68175.1| 193|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +3
Query: 288 MRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFI 467
MRA V+ FG ++ ++ P + + +VL+R A G+N D +R G P P++
Sbjct: 10 MRAAVVRRFGAPDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQYGKLPNLPYV 69
Query: 468 LGFECAGEIEQVGEMSPILRWATKWW 545
G + AG +E VGE ++ + W
Sbjct: 70 PGKDGAGFVELVGESVKNVKVGDRVW 95
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/84 (32%), Positives = 41/84 (48%)
Frame = +3
Query: 279 PKEMRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKT 458
PK RA++ +GG +K L P+P E E+L++++ G+ D+ G K
Sbjct: 7 PKTQRALIFESYGGPLEIKQLPIPQP--NEDELLVKMEYSGICHSDVHTWLGDFHYVSKC 64
Query: 459 PFILGFECAGEIEQVGEMSPILRW 530
P I G E AG + VG S + W
Sbjct: 65 PMIGGHEGAGSVISVG--SKVKNW 86
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +3
Query: 279 PKEMRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKT 458
P RA+V + G +++ + P P+ + E+L++++ G+ DL V G +
Sbjct: 6 PSTQRALVFDTWNG--PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVC 63
Query: 459 PFILGFECAGEIEQVGE 509
P + G E AG + Q+G+
Sbjct: 64 PLVGGHEGAGSVVQIGK 80
>AF036693-7|AAO61432.1| 343|Caenorhabditis elegans Hypothetical
protein C49A9.9b protein.
Length = 343
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 276 PPKEMRAVVLTGFGGLKTVKILKKPEPTVGEG 371
PPK+ +V TGF K K +KP VGEG
Sbjct: 242 PPKKEEKIVGTGFQPSKKDKNSEKPGQIVGEG 273
>AF036693-6|AAK29792.1| 428|Caenorhabditis elegans Hypothetical
protein C49A9.9a protein.
Length = 428
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 276 PPKEMRAVVLTGFGGLKTVKILKKPEPTVGEG 371
PPK+ +V TGF K K +KP VGEG
Sbjct: 242 PPKKEEKIVGTGFQPSKKDKNSEKPGQIVGEG 273
>AC090999-6|AAK26143.2| 214|Caenorhabditis elegans Hypothetical
protein Y82E9BR.11 protein.
Length = 214
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -1
Query: 395 GFHANQDLALTNGRLRFFEYLNGLETPEAGKYYGAHFLGRWGLIL 261
G H +L+NGR +++N +AG + ++F+ + G IL
Sbjct: 10 GAHEGDVRSLSNGRAELLDHINRFVDGKAGDHAQSNFVRKIGTIL 54
>U88172-11|AAB42257.1| 390|Caenorhabditis elegans Hypothetical
protein ZK354.2a protein.
Length = 390
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 379 RTSPSPTVGSGFLSILTVLRPPKPVS 302
RT+P T +GF +LTV+R PK V+
Sbjct: 262 RTTPETT--AGFFDLLTVIREPKDVA 285
>U88172-10|AAM97988.1| 437|Caenorhabditis elegans Hypothetical
protein ZK354.2b protein.
Length = 437
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 379 RTSPSPTVGSGFLSILTVLRPPKPVS 302
RT+P T +GF +LTV+R PK V+
Sbjct: 262 RTTPETT--AGFFDLLTVIREPKDVA 285
>AF125954-2|AAK68175.1| 193|Caenorhabditis elegans Hypothetical
protein C13B7.6 protein.
Length = 193
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 202 ENGATETPQEETPEKSTERKRMRPHRPRKCAP*YLPASGVSRPLRYSKNLSRPLVRARS 378
+ A E+ PEK ++ ++ PRKCAP L S V P+ K+ + L A +
Sbjct: 119 KRSAEESVTNSAPEKIQKKVHVKI-MPRKCAPQILRRSLVPPPILTPKSAKKKLKLAEN 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,664,867
Number of Sequences: 27780
Number of extensions: 379864
Number of successful extensions: 1300
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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