Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0118
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    25   0.58 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   7.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   7.1  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   9.4  

>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +1

Query: 310 TEITIKSVHEHDYYNRQNNLRLY 378
           + ++ K++H ++ YN  NN +LY
Sbjct: 305 SSLSNKTIHNNNNYNNYNNKKLY 327


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 675 AYDAIFNSRWPPTDARGVRNYYYLKLMF 592
           AY+ + N  W P   RG  N  Y+++ F
Sbjct: 65  AYNNVNNWLWTPFIERGPANRMYIEIKF 92


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 427 VITMIYTVEYKLQFINIPINKHSKLFNRKNEIY 525
           ++ M+  V+ +L+ IN+      ++ + KNE+Y
Sbjct: 6   ILAMVVGVQAELKQINVIFRHGDRIPDEKNEMY 38


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 460 LQFINIPINKHSKLFNRKNEIYFN 531
           LQ+  +P+N   K+   ++ +Y N
Sbjct: 86  LQYTQLPVNPRDKIEGAEDCLYLN 109


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 460 LQFINIPINKHSKLFNRKNEIYFN 531
           LQ+  +P+N   K+   ++ +Y N
Sbjct: 86  LQYTQLPVNPRDKIEGAEDCLYLN 109


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 754 SSLFNKTRYPH 722
           S +F+ TRYPH
Sbjct: 269 SEVFDTTRYPH 279


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,102
Number of Sequences: 438
Number of extensions: 4013
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)