Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0117
(690 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 147 5e-36
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 147 5e-36
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 147 5e-36
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 147 5e-36
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 144 5e-35
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 144 5e-35
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 142 2e-34
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 142 2e-34
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 130 8e-31
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 123 1e-28
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 112 2e-25
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 103 1e-22
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 9e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 72 4e-13
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 57 1e-08
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 50 2e-06
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 43 2e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 39 0.004
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 34 0.10
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.3
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.7
At4g10780.1 68417.m01758 disease resistance protein (CC-NBS-LRR ... 29 3.8
At2g39440.1 68415.m04841 expressed protein 29 3.8
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 28 5.1
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 28 5.1
At1g20950.1 68414.m02623 pyrophosphate--fructose-6-phosphate 1-p... 28 5.1
At2g26340.1 68415.m03160 expressed protein 28 6.7
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 28 6.7
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 28 6.7
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 28 6.7
At2g42760.1 68415.m05295 expressed protein 27 8.9
At2g27610.1 68415.m03349 pentatricopeptide (PPR) repeat-containi... 27 8.9
At2g11090.1 68415.m01187 expressed protein 27 8.9
At1g03560.1 68414.m00337 pentatricopeptide (PPR) repeat-containi... 27 8.9
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 147 bits (357), Expect = 5e-36
Identities = 66/73 (90%), Positives = 71/73 (97%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EY
Sbjct: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEY 364
Query: 328 DESGPSIVHRKCF 290
DESGPSIVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = -1
Query: 669 IGKRKIPLPKGFLPNPRFWVWKLAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
IG + P+ L P + GIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 252 IGAERFRCPE-VLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 147 bits (357), Expect = 5e-36
Identities = 66/73 (90%), Positives = 71/73 (97%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
TTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 305 TTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
Query: 328 DESGPSIVHRKCF 290
DESGPSIVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = -1
Query: 669 IGKRKIPLPKGFLPNPRFWVWKLAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
IG + P+ L P + AGIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 252 IGSERFRCPE-VLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 147 bits (357), Expect = 5e-36
Identities = 66/73 (90%), Positives = 71/73 (97%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
TTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 305 TTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
Query: 328 DESGPSIVHRKCF 290
DESGPSIVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = -1
Query: 669 IGKRKIPLPKGFLPNPRFWVWKLAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
IG + P+ L P + AGIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 252 IGGERFRCPE-VLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 147 bits (357), Expect = 5e-36
Identities = 66/73 (90%), Positives = 71/73 (97%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
TTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 305 TTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
Query: 328 DESGPSIVHRKCF 290
DESGPSIVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = -1
Query: 669 IGKRKIPLPKGFLPNPRFWVWKLAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
IG + P+ L P + AGIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 252 IGSERFRCPE-VLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 144 bits (349), Expect = 5e-35
Identities = 75/117 (64%), Positives = 89/117 (76%), Gaps = 4/117 (3%)
Frame = -3
Query: 628 KPSFLGMEACG-HPRDHI*LHH---EVRRGHP*GLVRQHRIVRWTTMYPGIADRMQKEIT 461
+PSF+GMEA G H + + ++R+ +V + TTM+ GIADRM KEIT
Sbjct: 265 QPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV----LSGGTTMFSGIADRMSKEIT 320
Query: 460 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 290
ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
Score = 69.3 bits (162), Expect = 2e-12
Identities = 35/54 (64%), Positives = 38/54 (70%)
Frame = -1
Query: 669 IGKRKIPLPKGFLPNPRFWVWKLAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
IG + P+ L P F + AGIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 252 IGAERFRCPE-VLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 144 bits (349), Expect = 5e-35
Identities = 75/117 (64%), Positives = 89/117 (76%), Gaps = 4/117 (3%)
Frame = -3
Query: 628 KPSFLGMEACG-HPRDHI*LHH---EVRRGHP*GLVRQHRIVRWTTMYPGIADRMQKEIT 461
+PSF+GMEA G H + + ++R+ +V + TTM+ GIADRM KEIT
Sbjct: 265 QPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV----LSGGTTMFSGIADRMSKEIT 320
Query: 460 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 290
ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
Score = 69.3 bits (162), Expect = 2e-12
Identities = 35/54 (64%), Positives = 38/54 (70%)
Frame = -1
Query: 669 IGKRKIPLPKGFLPNPRFWVWKLAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
IG + P+ L P F + AGIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 252 IGAERFRCPE-VLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 142 bits (344), Expect = 2e-34
Identities = 64/73 (87%), Positives = 69/73 (94%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
TTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 305 TTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
Query: 328 DESGPSIVHRKCF 290
DESGPSIVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -1
Query: 597 GIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
GIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 142 bits (344), Expect = 2e-34
Identities = 64/73 (87%), Positives = 69/73 (94%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
TTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 305 TTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
Query: 328 DESGPSIVHRKCF 290
DESGPSIVHRKCF
Sbjct: 365 DESGPSIVHRKCF 377
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -1
Query: 597 GIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
GIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 275 GIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 130 bits (314), Expect = 8e-31
Identities = 57/73 (78%), Positives = 65/73 (89%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
TTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F MWI+K EY
Sbjct: 306 TTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEY 365
Query: 328 DESGPSIVHRKCF 290
DE G +IVHRKCF
Sbjct: 366 DEQGGAIVHRKCF 378
Score = 64.5 bits (150), Expect = 6e-11
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -1
Query: 600 AGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
+GIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 275 SGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 305
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 123 bits (297), Expect = 1e-28
Identities = 54/73 (73%), Positives = 65/73 (89%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
TTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSILASLST++QMWI+K EY
Sbjct: 257 TTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEY 316
Query: 328 DESGPSIVHRKCF 290
+E+GP+IVH KCF
Sbjct: 317 EENGPAIVHTKCF 329
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/54 (57%), Positives = 35/54 (64%)
Frame = -1
Query: 669 IGKRKIPLPKGFLPNPRFWVWKLAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
IG + P+ L P + +GIHE TYNSIMKCD DIRKDLY N VLSGG
Sbjct: 204 IGAERFRCPE-VLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGG 256
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 112 bits (269), Expect = 2e-25
Identities = 49/72 (68%), Positives = 59/72 (81%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
TTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF QMWI+K EY
Sbjct: 294 TTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEY 353
Query: 328 DESGPSIVHRKC 293
+E G +IVHRKC
Sbjct: 354 EEHGAAIVHRKC 365
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = -1
Query: 600 AGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
+GIHE T NSI+KC VD R+D+Y N +++GG
Sbjct: 263 SGIHEATRNSILKCPVDTRRDMYGNILMTGG 293
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 103 bits (246), Expect = 1e-22
Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Frame = -3
Query: 628 KPSFLGMEACG-HPRDHI*LHH---EVRRGHP*GLVRQHRIVRWTTMYPGIADRMQKEIT 461
+PSF+GMEA G H + + ++R+ +V + TTM+ GIADRM KEIT
Sbjct: 265 QPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV----LSGGTTMFSGIADRMSKEIT 320
Query: 460 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 338
ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
Score = 69.3 bits (162), Expect = 2e-12
Identities = 35/54 (64%), Positives = 38/54 (70%)
Frame = -1
Query: 669 IGKRKIPLPKGFLPNPRFWVWKLAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
IG + P+ L P F + AGIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 252 IGAERFRCPE-VLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.6 bits (190), Expect = 9e-16
Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGGSILASLSTFQQMWISK 338
T+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQMW SK
Sbjct: 366 TSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSK 425
Query: 337 QEYDESGPSIVHRKC 293
EY+E G S + RKC
Sbjct: 426 SEYEEHGASYIQRKC 440
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -1
Query: 597 GIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
G+ SI KCDVDIR++LY++ +L+GG
Sbjct: 336 GLPHMVMESINKCDVDIRRELYSSILLAGG 365
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 71.7 bits (168), Expect = 4e-13
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Frame = -3
Query: 682 RVIPHRKTKDSVAKRLSSKPSFLGMEACGHPRDHI*LHHEVRRGHP*GLVRQHRIVRWTT 503
+VI + + SV + L +PS LG+E G + + V + L+ + TT
Sbjct: 229 QVISIGRERYSVGEALF-QPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTT 287
Query: 502 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIS 341
G R QKE L S ++ ++ PPE YS W+GG+ILA + Q ++
Sbjct: 288 SMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVT 346
Query: 340 KQEYDESGPSIVHRKCF 290
K +YDE+GPS+VHRKCF
Sbjct: 347 KADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = -3
Query: 508 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 329
+T++P + +R++ E+ L P +KI + VW GGS+LAS F+ M ++K EY
Sbjct: 348 STLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEY 407
Query: 328 DESGPSIVHRKCF 290
+E G + R+ F
Sbjct: 408 EELGSARCRRRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/93 (30%), Positives = 56/93 (60%), Gaps = 13/93 (13%)
Frame = -3
Query: 538 LVRQHRIVRW-TTMYPGIADRMQKEI------TALAPST-----MKIKIIAPPERKYSVW 395
++ QH ++ +TMYPG+ R++KEI T L + ++++I PP RK+ V+
Sbjct: 293 MLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVY 352
Query: 394 IGGSILAS-LSTFQQMWISKQEYDESGPSIVHR 299
+GG++LA + + WI++++Y E G + +++
Sbjct: 353 LGGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 597 GIHETTYNSIMKCDVDIRKDLYANTVLSGG 508
G+ + + I + D+D R LY + VLSGG
Sbjct: 274 GMADMVFRCIQEMDIDNRMMLYQHIVLSGG 303
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/45 (35%), Positives = 31/45 (68%)
Frame = -3
Query: 442 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 308
+++ +++ P ++++VW GGS+L+S F +K+EY+E G SI
Sbjct: 372 VEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = -3
Query: 496 PGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEY 329
PG+++R+++E+ PS++ I++I PP + W G ++++LS F W I+++++
Sbjct: 405 PGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -3
Query: 505 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 326
++ PG+ +R++ I + P I ++ + W G S A+ F +K +YD
Sbjct: 648 SLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYD 707
Query: 325 ESG 317
E G
Sbjct: 708 EKG 710
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 392 DPYGVLPLWRSNDLNLHCRW-GESCD 466
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 386 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDS 493
S DP GVL W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At4g10780.1 68417.m01758 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 892
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +1
Query: 448 MGREL*FPFAYGRRFQGTWWSTGQYGVG----VQVLTDVHVALHD 570
MGRE F A+ R + G YG+G +LT +H LHD
Sbjct: 155 MGRETIFQRAWNRLMDDGVGTMGLYGMGGVGKTTLLTQIHNTLHD 199
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 341 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCD 466
R+P G E GEDR DP + + R NDL + + + D
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAAD 81
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 395 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVH 502
P GV+PL NDL+ WG S F + +H
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPFAWRSAMKRTLH 227
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = -2
Query: 431 DHCSSREEVLRMDRWIDPRLPLYLPTNVDLETRVRRV 321
D C + +L MDR + P+ + + ++D+ T+V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At1g20950.1 68414.m02623 pyrophosphate--fructose-6-phosphate
1-phosphotransferase-related / pyrophosphate-dependent
6-phosphofructose-1-kinase-related similar to
pyrophosphate--fructose 6-phosphate 1-phosphotransferase
alpha subunit SP:Q41140 from [Ricinus communis]
Length = 614
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 449 WGESCDFLLHTVGDSRVHGGPPDNTVLAYKSLRMSTSHFMME 574
W + + L ++G +H D AY LR + F+ME
Sbjct: 493 WSQDASYTLTSIGRPAIHPAMVDLKGKAYDLLRQNAQKFLME 534
>At2g26340.1 68415.m03160 expressed protein
Length = 230
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 333 STTSLAPPLYTGSASKRTARRCLQQPGPAAQFRLVISVNLIVRKILL 193
+T SL PL++ S K+ P P Q R VISV+ + ++LL
Sbjct: 6 ATVSL--PLFSNSNHKKLTCAATLSPPPWKQSRRVISVSFFLSRLLL 50
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 395 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVH 502
P GV+PL NDL+ WG S F + +H
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPFAWRSAVKRTLH 224
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 411 GSTPYGSVDRSSPPS--LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQPGPAAQ 241
GS+P S+ RS S L S+ SR+ S+ S +PP G + ARR P P ++
Sbjct: 27 GSSPSRSISRSRSRSRSLSSSSSPSRSVSSGSRSPP-RRGKSPAGPARRGRSPPPPPSK 84
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 411 GSTPYGSVDRSSPPS--LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQPGPAAQ 241
GS+P S+ RS S L S+ SR+ S+ S +PP G + ARR P P ++
Sbjct: 27 GSSPSRSISRSRSRSRSLSSSSSPSRSVSSGSRSPP-RRGKSPAGPARRGRSPPPPPSK 84
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 470 GNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTNVDLETRVRRVW 318
GN ++RP +E DHC R+ ++ I R+P + VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At2g27610.1 68415.m03349 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 868
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/67 (31%), Positives = 27/67 (40%)
Frame = -3
Query: 520 IVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 341
+V WT M G KE S MK K + P E YSV + + S S +
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQ-VV 420
Query: 340 KQEYDES 320
K Y+ S
Sbjct: 421 KTNYERS 427
>At2g11090.1 68415.m01187 expressed protein
Length = 151
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 596 ASTRPHITPS*SATWTSVRTCTPTPYCPV 510
+++R H TP S TWT+ R+ TP+ +
Sbjct: 30 STSRHHSTPWSSTTWTTTRSHYSTPWSSI 58
>At1g03560.1 68414.m00337 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 660
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 357 WKVEREARIDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMVVHRTI 521
W+ +E I+P ++T FL G + +F VD A V I +V + T+
Sbjct: 210 WRKMKENGIEPTLYTYNFLMNGLVSAMF-VDSAERVFEVMESGRIKPDIVTYNTM 263
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,206,081
Number of Sequences: 28952
Number of extensions: 372058
Number of successful extensions: 1111
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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