Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0115
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-420|AAF51901.1|  274|Drosophila melanogaster CG15591-PA...    43   4e-04
AY070617-1|AAL48088.1|  233|Drosophila melanogaster RE71995p pro...    41   0.002
AE014297-421|AAF51900.1|  233|Drosophila melanogaster CG15592-PA...    41   0.002
BT011150-1|AAR82818.2|  823|Drosophila melanogaster GH13441p pro...    29   7.3  
AE014297-1755|AAF54985.1|  823|Drosophila melanogaster CG9322-PA...    29   7.3  
AE014134-231|AAF51393.1|   80|Drosophila melanogaster CG5011-PA ...    29   7.3  

>AE014297-420|AAF51901.1|  274|Drosophila melanogaster CG15591-PA
           protein.
          Length = 274

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
 Frame = +3

Query: 315 PRGLD--ESSLDNIIMDKIFRFMQTHTVQFNFPTGSDVQETEEGRDKRKKL--APMLAIP 482
           PR +D  E  L+N+I+ ++  F+Q HT+Q  F   ++   + EGR K++K     M+ IP
Sbjct: 128 PRSVDAKEQVLNNMILKRVGNFLQDHTLQVKFDNEAN---SVEGRKKKEKKGNGAMIMIP 184

Query: 483 ILVIGMMVP 509
           +L+ G +VP
Sbjct: 185 LLLGGTIVP 193



 Score = 31.9 bits (69), Expect = 0.78
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 127 DLKTAYDTYKDCTGAELSNCLKRKLAKALSKV-ANTEELSIPGG 255
           D+   Y  Y+ C+G  +S CLK KL   L K   + + LS+  G
Sbjct: 57  DMSMVYRIYQQCSGDNMSVCLKVKLLTGLEKAFRSAKSLSLMEG 100


>AY070617-1|AAL48088.1|  233|Drosophila melanogaster RE71995p
           protein.
          Length = 233

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
 Frame = +3

Query: 330 ESSLDNIIMDKIFRFMQTHTVQFNFPTGS--DVQET-EEGRDKRKKLAPMLAIPILVI 494
           E+ +D+++++++ RF  THT+QF  P  S  D+Q   EE R K+K+    L +P+L++
Sbjct: 92  EAEVDSLLVERVARFFGTHTLQFKVPKDSIQDMQRALEESRGKKKEKKKYL-MPLLML 148


>AE014297-421|AAF51900.1|  233|Drosophila melanogaster CG15592-PA
           protein.
          Length = 233

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
 Frame = +3

Query: 330 ESSLDNIIMDKIFRFMQTHTVQFNFPTGS--DVQET-EEGRDKRKKLAPMLAIPILVI 494
           E+ +D+++++++ RF  THT+QF  P  S  D+Q   EE R K+K+    L +P+L++
Sbjct: 92  EAEVDSLLVERVARFFGTHTLQFKVPKDSIQDMQRALEESRGKKKEKKKYL-MPLLML 148


>BT011150-1|AAR82818.2|  823|Drosophila melanogaster GH13441p
           protein.
          Length = 823

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 539 PPVEPELQKPGHHHSYDEDRDGEH 468
           PP  P  Q  GHHH++ +    EH
Sbjct: 542 PPPPPAPQSNGHHHNHQQREQREH 565


>AE014297-1755|AAF54985.1|  823|Drosophila melanogaster CG9322-PA
           protein.
          Length = 823

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 539 PPVEPELQKPGHHHSYDEDRDGEH 468
           PP  P  Q  GHHH++ +    EH
Sbjct: 542 PPPPPAPQSNGHHHNHQQREQREH 565


>AE014134-231|AAF51393.1|   80|Drosophila melanogaster CG5011-PA
          protein.
          Length = 80

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 3  PPYRHHHGDPPPH 41
          PP  HHH +PPPH
Sbjct: 3  PPPPHHHHNPPPH 15


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,997,558
Number of Sequences: 53049
Number of extensions: 591151
Number of successful extensions: 2808
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2800
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)