Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0114
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 171 6e-43
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 170 1e-42
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 168 4e-42
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 167 6e-42
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 166 2e-41
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 166 2e-41
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 164 7e-41
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 162 3e-40
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 152 2e-37
12_02_1282 + 27528159-27529148,27529549-27529614 91 6e-19
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 77 1e-14
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 71 1e-12
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 67 1e-11
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 62 4e-10
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 56 3e-08
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 54 8e-08
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 50 2e-06
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 46 4e-05
01_05_0018 - 17208358-17208367,17208485-17208537,17209321-172093... 36 0.032
07_01_0639 - 4785446-4786186,4786429-4786656,4786727-4786872,478... 36 0.042
09_01_0008 - 233137-233279,233712-233827,235376-235720,236218-23... 30 1.6
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 29 3.6
08_02_0238 + 14665813-14668798,14669088-14669125 29 3.6
12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497 28 8.4
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 28 8.4
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 171 bits (415), Expect = 6e-43
Identities = 91/144 (63%), Positives = 106/144 (73%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*--- 514
E SYELP ++ +RFRCP+ QP ++G + P H ++ + +
Sbjct: 236 EKSYELPDGQVITIG-AERFRCPEVLF-QPSLIG---MEAPGIHETTYNSIMKCDVDIRK 290
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 291 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 350
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWISK EYDESGPSIVHRKCF
Sbjct: 351 FQQMWISKGEYDESGPSIVHRKCF 374
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 170 bits (413), Expect = 1e-42
Identities = 91/145 (62%), Positives = 108/145 (74%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ ++RFRCP+ QP ++G S H + + ++R+
Sbjct: 239 EKSYELPDGQVITIG-SERFRCPEVLF-QPSMIGMESAGIHETTYNSIMKCDVDIRKD-- 294
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLS
Sbjct: 295 --LYGNVVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLS 352
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISK EYDESGP+IVHRKCF
Sbjct: 353 TFQQMWISKDEYDESGPAIVHRKCF 377
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 168 bits (408), Expect = 4e-42
Identities = 90/145 (62%), Positives = 107/145 (73%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP ++G + H + + ++R+
Sbjct: 239 EKSYELPDGQVITIG-AERFRCPEVLF-QPSMIGMEAAGIHETTYNSIMKCDVDIRKD-- 294
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLS
Sbjct: 295 --LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLS 352
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISK EYDESGP+IVHRKCF
Sbjct: 353 TFQQMWISKDEYDESGPAIVHRKCF 377
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = -1
Query: 665 PDGSGHHYGKRKDSVAQKAFLPNPSFLGMEACGIHETTYNSIMKCDVDIRKD 510
PDG G + + F PS +GMEA GIHETTYNSIMKCDVDIRKD
Sbjct: 245 PDGQVITIGAERFRCPEVLF--QPSMIGMEAAGIHETTYNSIMKCDVDIRKD 294
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 167 bits (407), Expect = 6e-42
Identities = 88/144 (61%), Positives = 104/144 (72%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHH---EVRRGHP* 514
E SYELP ++ +RFRCP+ F+ + H + + ++R+
Sbjct: 239 EKSYELPDGQVITIG-AERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKD--- 294
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 295 -LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWI+K EYDESGPSIVHRKCF
Sbjct: 354 FQQMWIAKAEYDESGPSIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 166 bits (403), Expect = 2e-41
Identities = 89/145 (61%), Positives = 107/145 (73%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP ++G + H + + ++R+
Sbjct: 242 EKSYELPDGQVITIG-AERFRCPEVLF-QPSLVGMEAAGIHETTYNSIMKCDVDIRKD-- 297
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLS
Sbjct: 298 --LYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLS 355
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISK EYDESGP+IVHRKCF
Sbjct: 356 TFQQMWISKAEYDESGPAIVHRKCF 380
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = -1
Query: 665 PDGSGHHYGKRKDSVAQKAFLPNPSFLGMEACGIHETTYNSIMKCDVDIRKD 510
PDG G + + F PS +GMEA GIHETTYNSIMKCDVDIRKD
Sbjct: 248 PDGQVITIGAERFRCPEVLF--QPSLVGMEAAGIHETTYNSIMKCDVDIRKD 297
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 166 bits (403), Expect = 2e-41
Identities = 87/144 (60%), Positives = 106/144 (73%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*--- 514
E SYELP ++ +RFRCP+ QP ++G + P H ++ + +
Sbjct: 239 EKSYELPDGQVITIG-AERFRCPE-VMFQPSLIG---MEAPGIHETTYNSIMKCDVDIRK 293
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 294 DLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWIS+ EY+ESGP+IVHRKCF
Sbjct: 354 FQQMWISRAEYEESGPAIVHRKCF 377
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 164 bits (398), Expect = 7e-41
Identities = 87/144 (60%), Positives = 105/144 (72%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*--- 514
E SYE+P ++ ++RFRCP+ QP ++G S P H ++ + +
Sbjct: 238 EKSYEMPDGQVITIG-SERFRCPEVLF-QPSLVGMES---PGIHEATYNSIMKCDVDIRK 292
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGG+TM+PGIADRM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYGNVVLSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLST 352
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWISK EYDESGP IVH KCF
Sbjct: 353 FQQMWISKGEYDESGPGIVHMKCF 376
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 162 bits (393), Expect = 3e-40
Identities = 86/144 (59%), Positives = 101/144 (70%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*--- 514
E SYELP ++ +RFRCP+ QP +G + P H ++ + +
Sbjct: 238 EKSYELPDGQVITIG-AERFRCPEVLF-QPSFIG---MEAPGIHEATYNSIMKCDVDIRK 292
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGG+TM+PGI DRM KEITALAP +MKIK++APPERKYSVWIGGSILASLST
Sbjct: 293 DLYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLST 352
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWISK EYDESGP IVH KCF
Sbjct: 353 FQQMWISKAEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 152 bits (369), Expect = 2e-37
Identities = 89/158 (56%), Positives = 105/158 (66%), Gaps = 17/158 (10%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*--- 514
E SYELP ++ +RFRCP+ QP +G + P H ++ + +
Sbjct: 239 EKSYELPDGQVITIG-AERFRCPEVLF-QPSFIG---MEAPGIHETTYNSIMKCDVDIRK 293
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 294 DLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQ--------------QMWISKQEYDESGPSIVHRKCF 262
FQ QMWISK EYDESGP+IVHRKCF
Sbjct: 354 FQQVNLTPTLYEVARMQMWISKGEYDESGPAIVHRKCF 391
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 91.5 bits (217), Expect = 6e-19
Identities = 65/144 (45%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHH---EVRRGHP* 514
E SYELP ++ +RFRCP+ FV + H + + ++R+
Sbjct: 239 EKSYELPDGQVITIG-AERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKD--- 294
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK
Sbjct: 295 -LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK----------------------- 330
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
MWI+K EYDESGPSIVHRKCF
Sbjct: 331 ---MWIAKAEYDESGPSIVHRKCF 351
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSIL 349
L NT+L GGT G DR Q+E L+ S + ++ PPE +YS W+GG+IL
Sbjct: 311 LLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAIL 369
Query: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 262
A + Q ++K +YDE+GPSIVH+KCF
Sbjct: 370 AKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 331
L+ +L+GG+T++P +R++KE+ L P ++KIIA + W GGS+LA F
Sbjct: 346 LFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDF 405
Query: 330 QQMWISKQEYDESGPSIVHRKCF 262
+ M I+K EY+E G R+ F
Sbjct: 406 ESMCITKSEYEEMGSMRCRRRFF 428
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/72 (43%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 340
L ++ +LSGG++ + +R++KE+ + ++K++A ER++SVWIGGSILASL
Sbjct: 398 LLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASL 457
Query: 339 STFQQMWISKQE 304
+FQQMW SK +
Sbjct: 458 GSFQQMWFSKAD 469
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -3
Query: 507 YANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLST 334
Y VLSGG++ PG+++R++KE+ L P+ + I++I PP S W G +++++ST
Sbjct: 398 YKTVVLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVST 457
Query: 333 FQQMW-ISKQEYDE----SGPSIVH 274
F + W I K+++ + +GPS V+
Sbjct: 458 FTEAWCIKKKQFRQKTRRNGPSFVN 482
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIAPPERK 379
LY N VLSGG+TM+ R+Q+++ + + + ++ +++ P ++
Sbjct: 370 LYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQR 429
Query: 378 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 280
Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 430 YAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAP--------------STMKIKIIAPPERKYS 373
LY N VLSGG+TM+ R+Q +I + +++ ++A P + Y+
Sbjct: 339 LYKNIVLSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYA 398
Query: 372 VWIGGSILASLSTFQQMWISKQEYDESGPSI 280
W GGS+ AS F + +K+EY+E G SI
Sbjct: 399 AWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 11/68 (16%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWI 364
LY + VLSGG+TMYPG+ R++KE+ L + ++++I PP RK+ V++
Sbjct: 323 LYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYL 382
Query: 363 GGSILASL 340
GG++LA +
Sbjct: 383 GGAVLAGI 390
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 331
L + +++GG ++ PG+ R++ I P +K++ + W G + A+ S F
Sbjct: 622 LCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKF 681
Query: 330 QQMWISKQEYDESGPSIVHRK 268
+ S +Y E G ++ HRK
Sbjct: 682 GRHTFSLADYREHGENLFHRK 702
>01_05_0018 -
17208358-17208367,17208485-17208537,17209321-17209383,
17209971-17210045,17210090-17210104,17210983-17211045,
17211129-17211218,17211396-17211714,17211814-17211860,
17211949-17212054,17212539-17212592,17212806-17212912,
17212996-17213160,17213383-17213476,17213572-17213636,
17213841-17213969
Length = 484
Score = 35.9 bits (79), Expect = 0.032
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = -3
Query: 690 PRESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*G 511
P +S + V+S E RF+ SS + +GYG+L +P++ H V P G
Sbjct: 174 PTQSGRPDSQLVKSLHIEAHRFKV----SSAGWNVGYGNLPYPKEETLSRHSVLG--PNG 227
Query: 510 LYANTV--LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 382
L+ ++G YP A+ + ++++L PS + ++ P R
Sbjct: 228 LHGKWTAPVTGIRIQYPSNAELTKSDVSSLVPSILNQDLLYGPSR 272
>07_01_0639 -
4785446-4786186,4786429-4786656,4786727-4786872,
4786986-4787186,4787256-4787432,4787741-4788359
Length = 703
Score = 35.5 bits (78), Expect = 0.042
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = -2
Query: 700 RGPPSRKFLRT-SPTGQVITMGNEKIPLPKRLFFPTLRS--WVWKLAASTRPHITPS*SA 530
R PP+ + RT SPT + T+ + P L F + RS W AS+ P+ P S+
Sbjct: 146 RRPPADEATRTQSPTSPLFTV----LSSPPALVFRSSRSSRGCWSTTASSFPNSRPMPSS 201
Query: 529 TWTSVRTVRQHRIVR 485
W S+ QH+ +R
Sbjct: 202 AWPSMNLDNQHQSLR 216
>09_01_0008 -
233137-233279,233712-233827,235376-235720,236218-236292,
236508-236636,237516-237589,237836-237968,239366-239584,
239671-239756,239843-241107,241304-241640,242548-242862,
243614-243697,243776-243883,243981-244079
Length = 1175
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 651 SSLWETKRFRCPKGFSSQPFVLGYGSLRH 565
S WE K + C +G P+ +GY ++RH
Sbjct: 21 SGEWERKYWSCSRGKDRYPYPVGYHAVRH 49
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = -3
Query: 546 LHHEVRRGHP*GL--YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 373
++ ++ HP L Y S G MYP D +K+ L K APPER+++
Sbjct: 230 IYRDILEYHPNMLREYLEGTESAGF-MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHN 288
Query: 372 VWIGGSILAS 343
S+L S
Sbjct: 289 SLPRPSVLYS 298
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 358 STDPYGVLPLWRSNDLNLHCRW-GESC 435
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497
Length = 800
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -2
Query: 523 TSVRTVRQHRIVRWYHHVPWNRRPYAKGNHSSRPIDNED*DHCSSREEVL--RMDRWIDP 350
+S TVR + W +PWN+ AK SSRP+ D C V+ + W P
Sbjct: 344 SSEYTVRSPPVPPWRAVIPWNK---AKMTSSSRPLPWPDPQLCQGNGGVVVKLLQPWSSP 400
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 474 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 373
MYP D +K+ L K APPER+++
Sbjct: 350 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHN 383
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,658,615
Number of Sequences: 37544
Number of extensions: 510348
Number of successful extensions: 1390
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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