Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0114
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 184 7e-47
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 184 7e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 184 7e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 184 7e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 184 7e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 184 7e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 184 7e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 184 7e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 184 7e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 177 5e-45
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 175 2e-44
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 99 4e-21
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 97 1e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 65 5e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 40 0.002
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.15
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.61
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.61
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.61
AC006670-2|ABC71822.1| 901|Caenorhabditis elegans Patched relat... 31 1.1
Z68217-3|CAA92466.2| 466|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z77136-3|CAB00886.1| 252|Caenorhabditis elegans Hypothetical pr... 28 5.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 184 bits (447), Expect = 7e-47
Identities = 101/145 (69%), Positives = 110/145 (75%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP LG S H + + ++R+
Sbjct: 238 EKSYELPDGQVITVGN-ERFRCPEAMF-QPSFLGMESAGIHETSYNSIMKCDIDIRKD-- 293
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 294 --LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 184 bits (447), Expect = 7e-47
Identities = 101/145 (69%), Positives = 110/145 (75%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP LG S H + + ++R+
Sbjct: 238 EKSYELPDGQVITVGN-ERFRCPEALF-QPSFLGMESAGIHETSYNSIMKCDIDIRKD-- 293
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 294 --LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 184 bits (447), Expect = 7e-47
Identities = 101/145 (69%), Positives = 110/145 (75%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP LG S H + + ++R+
Sbjct: 238 EKSYELPDGQVITVGN-ERFRCPEAMF-QPSFLGMESAGIHETSYNSIMKCDIDIRKD-- 293
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 294 --LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (447), Expect = 7e-47
Identities = 101/145 (69%), Positives = 110/145 (75%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP LG S H + + ++R+
Sbjct: 238 EKSYELPDGQVITVGN-ERFRCPEALF-QPSFLGMESAGIHETSYNSIMKCDIDIRKD-- 293
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 294 --LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (447), Expect = 7e-47
Identities = 101/145 (69%), Positives = 110/145 (75%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP LG S H + + ++R+
Sbjct: 238 EKSYELPDGQVITVGN-ERFRCPEALF-QPSFLGMESAGIHETSYNSIMKCDIDIRKD-- 293
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 294 --LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 184 bits (447), Expect = 7e-47
Identities = 101/145 (69%), Positives = 110/145 (75%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP LG S H + + ++R+
Sbjct: 238 EKSYELPDGQVITVGN-ERFRCPEAMF-QPSFLGMESAGIHETSYNSIMKCDIDIRKD-- 293
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 294 --LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 184 bits (447), Expect = 7e-47
Identities = 101/145 (69%), Positives = 110/145 (75%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP LG S H + + ++R+
Sbjct: 194 EKSYELPDGQVITVGN-ERFRCPEALF-QPSFLGMESAGIHETSYNSIMKCDIDIRKD-- 249
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 250 --LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 307
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 308 TFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 184 bits (447), Expect = 7e-47
Identities = 101/145 (69%), Positives = 110/145 (75%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP LG S H + + ++R+
Sbjct: 224 EKSYELPDGQVITVGN-ERFRCPEALF-QPSFLGMESAGIHETSYNSIMKCDIDIRKD-- 279
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 280 --LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 338 TFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 184 bits (447), Expect = 7e-47
Identities = 101/145 (69%), Positives = 110/145 (75%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP LG S H + + ++R+
Sbjct: 238 EKSYELPDGQVITVGN-ERFRCPEALF-QPSFLGMESAGIHETSYNSIMKCDIDIRKD-- 293
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 294 --LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 177 bits (432), Expect = 5e-45
Identities = 100/145 (68%), Positives = 109/145 (75%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP LG S H + + ++R+
Sbjct: 238 EKSYELPDGQVITVGN-ERFRCPEAMF-QPSFLGMESAGIHETSYNSIMKCDIDIRKD-- 293
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 294 --LYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLS 350
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 351 TFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 175 bits (427), Expect = 2e-44
Identities = 94/144 (65%), Positives = 107/144 (74%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHH---EVRRGHP* 514
E SYELP ++ +RFRCP+ F+ G+ H + + ++R+
Sbjct: 237 EKSYELPDGQVITIGN-ERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKD--- 292
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLST
Sbjct: 293 -LYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLST 351
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 98.7 bits (235), Expect = 4e-21
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 340
L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 339 STFQQMWISKQEYDESGPSIVHRKC 265
TFQQMW+SK EYDESG SIV +KC
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 96.7 bits (230), Expect = 1e-20
Identities = 42/83 (50%), Positives = 60/83 (72%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 331
LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTF 351
Query: 330 QQMWISKQEYDESGPSIVHRKCF 262
++MW+ K+EY++ G S +H++ F
Sbjct: 352 RKMWLGKKEYEDMGASAMHKRFF 374
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 596 PSFLGMEACGIHETTYNSIMKCDVDIRK 513
P +G E G+ SIMKCDVD+R+
Sbjct: 263 PDLIGTEWPGMAHVVNQSIMKCDVDLRQ 290
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Frame = -3
Query: 507 YANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIG 361
Y + VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++G
Sbjct: 298 YKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLG 357
Query: 360 GSILASL--STFQQMWISKQEYDESG 289
G++LA+L Q W+SK+EY+E G
Sbjct: 358 GAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 64.9 bits (151), Expect = 5e-11
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 16/94 (17%)
Frame = -3
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPER 382
GLY N VLSGG+TM+ A ++Q+++ L+ P + +++I+ +
Sbjct: 321 GLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQ 380
Query: 381 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 280
+Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 381 RYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/69 (36%), Positives = 46/69 (66%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 331
LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS STF
Sbjct: 471 LYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTF 530
Query: 330 QQMWISKQE 304
+ IS Q+
Sbjct: 531 EDSCISLQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 340
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 339 STFQQMWISKQEYDESGPSIVHRKCF*T 256
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 647 HYGKRKDSVAQKAFLPNPSFLGMEACGIHETTYNSIMKCDVDIR 516
H G + ++ + F NPS + ++ CG+ E SI +C +R
Sbjct: 264 HLGVERFAIPEILF--NPSDIDIDQCGVAEAVIESICQCPEALR 305
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 340
L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 339 STFQQMWISKQEYDESGPSIVHRKCF*T 256
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 647 HYGKRKDSVAQKAFLPNPSFLGMEACGIHETTYNSIMKCDVDIR 516
H G + ++ + F NPS + ++ CG+ E SI +C +R
Sbjct: 264 HLGVERFAIPEILF--NPSDIDIDQCGVAEAVIESICQCPEALR 305
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGG 358
L+ N +L+GG + PG+ R+++EI + + KI +I E K + W+G
Sbjct: 209 LFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGA 268
Query: 357 SILASL-STFQQMWISKQEY 301
S+L SL T ++ ++ +E+
Sbjct: 269 SLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 367 PYGVLPLWRSNDLNLHCRWGESCD 438
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 367 PYGVLPLWRSNDLNLHCRWGESCD 438
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 367 PYGVLPLWRSNDLNLHCRWGESCD 438
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AC006670-2|ABC71822.1| 901|Caenorhabditis elegans Patched related
family protein12, isoform a protein.
Length = 901
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +2
Query: 410 FIVDGARAVISFCIRSAIPGYMVV---PPDNTVLAYSPYGCPRR 532
F+ D A A+I C+ + G V P DN + Y+PYG R
Sbjct: 36 FVADHAVALIVICVVLTLIGTFKVATTPNDNDITGYTPYGARAR 79
>Z68217-3|CAA92466.2| 466|Caenorhabditis elegans Hypothetical
protein F58G6.4 protein.
Length = 466
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 629 DSVAQKAFLPNPSFLGMEACGIHETTYNSI 540
D V Q+ +LPN F+ ++ IHE+ + ++
Sbjct: 107 DKVLQRLWLPNTCFINSKSAAIHESPFKNV 136
>Z77136-3|CAB00886.1| 252|Caenorhabditis elegans Hypothetical
protein ZC376.4 protein.
Length = 252
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -2
Query: 532 ATWTSVRTVRQHRIVRWYHHVPWNRRPYAKGNHSSRPIDNED*DHCSSREEV 377
A W ++Q RI +W+ NRR + + DNED S R V
Sbjct: 43 AEWAQTYQIQQRRIRKWFD----NRRTRDRERRKRKGDDNEDSSEISKRGRV 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,079,900
Number of Sequences: 27780
Number of extensions: 380972
Number of successful extensions: 1016
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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