Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0114
(710 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 169 2e-42
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 167 6e-42
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 167 6e-42
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 166 1e-41
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 164 4e-41
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 164 4e-41
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 162 2e-40
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 162 2e-40
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 146 1e-35
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 142 2e-34
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 126 1e-29
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 120 7e-28
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 93 2e-19
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 80 1e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 69 3e-12
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 63 2e-10
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 53 2e-07
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 48 8e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 41 7e-04
At5g43500.2 68418.m05318 expressed protein 34 0.11
At5g43500.1 68418.m05319 expressed protein 34 0.11
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.3
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.7
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 29 3.0
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 29 4.0
At2g39440.1 68415.m04841 expressed protein 29 4.0
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 28 5.3
At2g42760.1 68415.m05295 expressed protein 28 5.3
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 28 7.0
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 169 bits (410), Expect = 2e-42
Identities = 89/144 (61%), Positives = 106/144 (73%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*--- 514
E +YELP ++ +RFRCP+ QP ++G + P H ++ + +
Sbjct: 239 EKNYELPDGQVITIG-AERFRCPEVLF-QPSLIG---MEAPGIHETTYNSIMKCDVDIRK 293
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 294 DLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWISK EYDESGPSIVHRKCF
Sbjct: 354 FQQMWISKSEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 167 bits (406), Expect = 6e-42
Identities = 88/144 (61%), Positives = 107/144 (74%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*--- 514
E +YELP ++ ++RFRCP+ QP ++G + + H ++ + +
Sbjct: 239 EKNYELPDGQVITIG-SERFRCPEVLY-QPSMIG---MENAGIHETTYNSIMKCDVDIRK 293
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 294 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWI+K EYDESGPSIVHRKCF
Sbjct: 354 FQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 167 bits (406), Expect = 6e-42
Identities = 88/144 (61%), Positives = 107/144 (74%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*--- 514
E +YELP ++ ++RFRCP+ QP ++G + + H ++ + +
Sbjct: 239 EKNYELPDGQVITIG-SERFRCPEVLY-QPSMIG---MENAGIHETTYNSIMKCDVDIRK 293
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 294 DLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWI+K EYDESGPSIVHRKCF
Sbjct: 354 FQQMWIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 166 bits (404), Expect = 1e-41
Identities = 90/145 (62%), Positives = 107/145 (73%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDHI*LHH---EVRRGHP 517
E SYELP ++ +RFRCP+ QP ++G + H + + ++R+
Sbjct: 239 EKSYELPDGQVITIGG-ERFRCPEVLF-QPSLVGMEAAGIHETTYNSIMKCDVDIRKD-- 294
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLS
Sbjct: 295 --LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLS 352
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
TFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 353 TFQQMWIAKAEYDESGPSIVHRKCF 377
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = -1
Query: 665 PDGSGHHYGKRKDSVAQKAFLPNPSFLGMEACGIHETTYNSIMKCDVDIRKD 510
PDG G + + F PS +GMEA GIHETTYNSIMKCDVDIRKD
Sbjct: 245 PDGQVITIGGERFRCPEVLF--QPSLVGMEAAGIHETTYNSIMKCDVDIRKD 294
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 164 bits (399), Expect = 4e-41
Identities = 87/144 (60%), Positives = 105/144 (72%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*--- 514
E S+ELP ++ +RFRCP+ QP ++G + +P H ++ + +
Sbjct: 239 EKSFELPDGQVITIG-AERFRCPEVLF-QPSMIG---MENPGIHETTYNSIMKCDVDIRK 293
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 294 DLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWI+K EYDESGPSIVHRKCF
Sbjct: 354 FQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 164 bits (399), Expect = 4e-41
Identities = 87/144 (60%), Positives = 105/144 (72%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHHEVRRGHP*--- 514
E S+ELP ++ +RFRCP+ QP ++G + +P H ++ + +
Sbjct: 239 EKSFELPDGQVITIG-AERFRCPEVLF-QPSMIG---MENPGIHETTYNSIMKCDVDIRK 293
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 294 DLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWI+K EYDESGPSIVHRKCF
Sbjct: 354 FQQMWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 162 bits (393), Expect = 2e-40
Identities = 86/144 (59%), Positives = 102/144 (70%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHH---EVRRGHP* 514
E +YELP ++ +RFRCP+ FV + H + + ++R+
Sbjct: 239 EKNYELPDGQVITIG-AERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKD--- 294
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 295 -LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWISK EYDE+GP IVHRKCF
Sbjct: 354 FQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 162 bits (393), Expect = 2e-40
Identities = 86/144 (59%), Positives = 102/144 (70%), Gaps = 3/144 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHH---EVRRGHP* 514
E +YELP ++ +RFRCP+ FV + H + + ++R+
Sbjct: 239 EKNYELPDGQVITIG-AERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKD--- 294
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 295 -LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQQMWISKQEYDESGPSIVHRKCF 262
FQQMWISK EYDE+GP IVHRKCF
Sbjct: 354 FQQMWISKAEYDEAGPGIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 146 bits (354), Expect = 1e-35
Identities = 65/83 (78%), Positives = 73/83 (87%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 331
LY N VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F
Sbjct: 296 LYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSF 355
Query: 330 QQMWISKQEYDESGPSIVHRKCF 262
MWI+K EYDE G +IVHRKCF
Sbjct: 356 APMWITKAEYDEQGGAIVHRKCF 378
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -1
Query: 665 PDGSGHHYGKRKDSVAQKAFLPNPSFLGMEACGIHETTYNSIMKCDVDIRKD 510
PDG G + + F S +GME GIHETTYNSIMKCDVDIRKD
Sbjct: 246 PDGQVITIGAERFRCPEVLF--QTSLIGMETSGIHETTYNSIMKCDVDIRKD 295
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 142 bits (344), Expect = 2e-34
Identities = 76/145 (52%), Positives = 102/145 (70%), Gaps = 4/145 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLR-HPRDH---I*LHHEVRRGHP 517
+ +YELP ++ +RFRCP+ QP ++G + H + + + ++R+
Sbjct: 191 DRTYELPDGQVITIG-AERFRCPEVLF-QPSLIGMETSGIHEKTYNSIMKCDDDIRKD-- 246
Query: 516 *GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 337
LY N VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSILASLS
Sbjct: 247 --LYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLS 304
Query: 336 TFQQMWISKQEYDESGPSIVHRKCF 262
T++QMWI+K EY+E+GP+IVH KCF
Sbjct: 305 TYEQMWITKAEYEENGPAIVHTKCF 329
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 126 bits (305), Expect = 1e-29
Identities = 68/142 (47%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGS--LRHPRDHI*LHHEVRRGHP*G 511
+ +Y LP ++ E +RF CP+ QP V+G S + + L V
Sbjct: 228 DKTYVLPDGQEITI-EAERFMCPEVLF-QPSVIGKESSGIHEATRNSILKCPVDTRRD-- 283
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 331
+Y N +++GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF
Sbjct: 284 MYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTF 343
Query: 330 QQMWISKQEYDESGPSIVHRKC 265
QMWI+K EY+E G +IVHRKC
Sbjct: 344 HQMWITKDEYEEHGAAIVHRKC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 120 bits (290), Expect = 7e-28
Identities = 69/128 (53%), Positives = 86/128 (67%), Gaps = 3/128 (2%)
Frame = -3
Query: 684 ESSYELPRRVRSSLWETKRFRCPKGFSSQPFVLGYGSLRHPRDHI*LHH---EVRRGHP* 514
E +YELP ++ +RFRCP+ FV + H + + ++R+
Sbjct: 239 EKNYELPDGQVITIG-AERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKD--- 294
Query: 513 GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 334
LY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLST
Sbjct: 295 -LYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST 353
Query: 333 FQQMWISK 310
FQQ+ I +
Sbjct: 354 FQQVKIDQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/85 (47%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGGSILASL 340
LY++ +L+GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL
Sbjct: 356 LYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASL 415
Query: 339 STFQQMWISKQEYDESGPSIVHRKC 265
+FQQMW SK EY+E G S + RKC
Sbjct: 416 GSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 80.2 bits (189), Expect = 1e-15
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSIL 349
L NTVL GGTT G R QKE L S ++ ++ PPE YS W+GG+IL
Sbjct: 276 LLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAIL 334
Query: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 262
A + Q ++K +YDE+GPS+VHRKCF
Sbjct: 335 AKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/83 (36%), Positives = 50/83 (60%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 331
LY + +L+GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F
Sbjct: 338 LYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDF 397
Query: 330 QQMWISKQEYDESGPSIVHRKCF 262
+ M ++K EY+E G + R+ F
Sbjct: 398 ESMCVTKAEYEELGSARCRRRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 12/92 (13%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWI 364
LY + VLSGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++
Sbjct: 294 LYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYL 353
Query: 363 GGSILAS-LSTFQQMWISKQEYDESGPSIVHR 271
GG++LA + + WI++++Y E G + +++
Sbjct: 354 GGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 16/93 (17%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIAPPERK 379
LY N VLSGG+TM+ R+Q+++ + + + ++ +++ P ++
Sbjct: 324 LYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQR 383
Query: 378 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 280
++VW GGS+L+S F +K+EY+E G SI
Sbjct: 384 FAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/72 (29%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = -3
Query: 507 YANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLST 334
+ VL+GG+ PG+++R+++E+ PS++ I++I PP + W G ++++LS
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSI 451
Query: 333 FQQMW-ISKQEY 301
F W I+++++
Sbjct: 452 FPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 331
L ++ +++GG ++ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 637 LTSSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNF 696
Query: 330 QQMWISKQEYDESG 289
+K +YDE G
Sbjct: 697 LGNAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILAS 343
L+++ L GG + G+ +++ + P T I + + E ++ W GG+IL
Sbjct: 482 LFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGI 541
Query: 342 LSTFQQMWISKQEYDESG 289
L ++ WI + ++ +G
Sbjct: 542 LDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = -3
Query: 510 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILAS 343
L+++ L GG + G+ +++ + P T I + + E ++ W GG+IL
Sbjct: 494 LFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGI 553
Query: 342 LSTFQQMWISKQEYDESG 289
L ++ WI + ++ +G
Sbjct: 554 LDFGREAWIERHQWMVNG 571
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 364 DPYGVLPLWRSNDLNLHCRW-GESCD 438
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +1
Query: 358 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDS 465
S DP GVL W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = -3
Query: 546 LHHEVRRGHP*GLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 373
++ E+ HP L G + +YP ++K+ L ++ K + PP+RK++
Sbjct: 340 IYREILEYHPQLLKDYMNSEGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKHA 397
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -2
Query: 403 DHCSSREEVLRMDRWIDPRLPLYLPTDVDLETGVRRV 293
D C + +L MDR + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 313 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCD 438
R+P G E GEDR DP + + R NDL + + + D
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAAD 81
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 367 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVH 474
P GV+PL NDL+ WG S F + +H
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPFAWRSAMKRTLH 227
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2
Query: 442 GNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTDVDLETGVRRVW 290
GN ++RP +E DHC R+ ++ I R+P ++VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 367 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVH 474
P GV+PL NDL+ WG S F + +H
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPFAWRSAVKRTLH 224
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,359,001
Number of Sequences: 28952
Number of extensions: 367566
Number of successful extensions: 1043
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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