Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0113
         (725 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             143   2e-36
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.8  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  143 bits (346), Expect = 2e-36
 Identities = 80/118 (67%), Positives = 89/118 (75%), Gaps = 4/118 (3%)
 Frame = -3

Query: 654 KVITIGKRKDSGCPEALFPTLVLGYGSLR-HPRDHI*LHH---EVRRGHP*GLYANTVLS 487
           +VITIG  +   CPEALF    LG  +   H   +  +     ++R+     LYANTVLS
Sbjct: 21  QVITIGNERFR-CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKD----LYANTVLS 75

Query: 486 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 313
           GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSILASLSTFQQMWIS
Sbjct: 76  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQMWIS 133



 Score = 78.6 bits (185), Expect = 6e-17
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = -1

Query: 665 PDGSRSSLSGNEKIPVAQRLSFQPSFLGMEACGIHETTYNSIMKCDVDIRKD 510
           PDG   ++ GNE+    + L FQPSFLGMEACGIHETTYNSIMKCDVDIRKD
Sbjct: 18  PDGQVITI-GNERFRCPEAL-FQPSFLGMEACGIHETTYNSIMKCDVDIRKD 67


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 646 HYRETKRFRLPRGSLSNPRSWVW 578
           HYR T+R R     L N +   W
Sbjct: 134 HYRRTRRDRYTNLGLVNEQGQTW 156


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 496 RIVRWYHHVPWNRRPYAK 443
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 496 RIVRWYHHVPWNRRPYAK 443
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,185
Number of Sequences: 438
Number of extensions: 5121
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)