Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0110
         (568 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...   165   1e-42
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.3  

>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score =  165 bits (400), Expect = 1e-42
 Identities = 75/104 (72%), Positives = 87/104 (83%)
 Frame = +1

Query: 253 QIAGSLHMTVQTAVLIETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDD 432
           +IAG LHMT+QTAVLIETLIELGAEVQWSS NI+STQD AAAA+V  G+P+YAWKGETD+
Sbjct: 48  RIAGCLHMTIQTAVLIETLIELGAEVQWSSCNIFSTQDHAAAAMVKAGVPVYAWKGETDE 107

Query: 433 EYIWCIEQTLIFPDGKPLNMILDDGVT*QT*STLSTPDLLKDVK 564
           EY+WCI QTLIFPDGKPLNMILDDG           P+LLK+++
Sbjct: 108 EYMWCIRQTLIFPDGKPLNMILDDGGDLTNLVHAEHPELLKEIR 151



 Score = 77.4 bits (182), Expect = 3e-16
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +2

Query: 119 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGAK 256
           KP YK+AD  LAE+GRKEI+LAE EMPGLMACR+KY P KIL+GA+
Sbjct: 3   KPAYKVADISLAEFGRKEIVLAENEMPGLMACRQKYGPLKILRGAR 48


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 231  GAYFRRHAIRPGISFSANI 175
            G Y RR+A+RP I   ANI
Sbjct: 1812 GKYKRRYAMRPEIKVLANI 1830


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,232
Number of Sequences: 2352
Number of extensions: 12662
Number of successful extensions: 27
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)