Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0110
         (568 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S57284-1|AAB25906.1|  437|Caenorhabditis elegans S-adenosylhomoc...   149   1e-36
M64306-1|AAA28062.1|  437|Caenorhabditis elegans S-adenosylhomoc...   149   1e-36
AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical ...   149   1e-36
Z81512-4|CAB04170.1|  550|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>S57284-1|AAB25906.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  149 bits (362), Expect = 1e-36
 Identities = 65/85 (76%), Positives = 75/85 (88%)
 Frame = +1

Query: 253 QIAGSLHMTVQTAVLIETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDD 432
           +IAG LHMT+QTAVLIETL  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+
Sbjct: 50  RIAGCLHMTIQTAVLIETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDE 109

Query: 433 EYIWCIEQTLIFPDGKPLNMILDDG 507
           EY WCIEQT++F DG+PLNMILDDG
Sbjct: 110 EYEWCIEQTIVFKDGQPLNMILDDG 134



 Score = 70.9 bits (166), Expect = 6e-13
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = +2

Query: 119 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGAK 256
           KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGA+
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGAR 50



 Score = 29.5 bits (63), Expect = 1.8
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 507 GDLTNLVHTKYPR 545
           GDLTNLVH KYP+
Sbjct: 135 GDLTNLVHAKYPQ 147


>M64306-1|AAA28062.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  149 bits (362), Expect = 1e-36
 Identities = 65/85 (76%), Positives = 75/85 (88%)
 Frame = +1

Query: 253 QIAGSLHMTVQTAVLIETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDD 432
           +IAG LHMT+QTAVLIETL  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+
Sbjct: 50  RIAGCLHMTIQTAVLIETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDE 109

Query: 433 EYIWCIEQTLIFPDGKPLNMILDDG 507
           EY WCIEQT++F DG+PLNMILDDG
Sbjct: 110 EYEWCIEQTIVFKDGQPLNMILDDG 134



 Score = 70.9 bits (166), Expect = 6e-13
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = +2

Query: 119 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGAK 256
           KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGA+
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGAR 50



 Score = 29.5 bits (63), Expect = 1.8
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 507 GDLTNLVHTKYPR 545
           GDLTNLVH KYP+
Sbjct: 135 GDLTNLVHAKYPQ 147


>AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical
           protein K02F2.2 protein.
          Length = 437

 Score =  149 bits (362), Expect = 1e-36
 Identities = 65/85 (76%), Positives = 75/85 (88%)
 Frame = +1

Query: 253 QIAGSLHMTVQTAVLIETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDD 432
           +IAG LHMT+QTAVLIETL  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+
Sbjct: 50  RIAGCLHMTIQTAVLIETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDE 109

Query: 433 EYIWCIEQTLIFPDGKPLNMILDDG 507
           EY WCIEQT++F DG+PLNMILDDG
Sbjct: 110 EYEWCIEQTIVFKDGQPLNMILDDG 134



 Score = 70.9 bits (166), Expect = 6e-13
 Identities = 32/46 (69%), Positives = 39/46 (84%)
 Frame = +2

Query: 119 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGAK 256
           KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGA+
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGAR 50



 Score = 29.5 bits (63), Expect = 1.8
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 507 GDLTNLVHTKYPR 545
           GDLTNLVH KYP+
Sbjct: 135 GDLTNLVHAKYPQ 147


>Z81512-4|CAB04170.1|  550|Caenorhabditis elegans Hypothetical
           protein F25C8.4 protein.
          Length = 550

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -1

Query: 157 FSQFLVSDFVRRLHFVVQSLIYLR 86
           F+QF   D +++  F+ +SL+YL+
Sbjct: 40  FAQFTFQDVMQKADFIAKSLVYLK 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,368,850
Number of Sequences: 27780
Number of extensions: 291064
Number of successful extensions: 683
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)