Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0109
(664 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 25 0.55
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 23 1.7
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 22 5.2
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 22 5.2
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 22 5.2
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 22 5.2
DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory pro... 21 9.0
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 9.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 9.0
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 21 9.0
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 9.0
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 9.0
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory
receptor candidate 27 protein.
Length = 346
Score = 25.0 bits (52), Expect = 0.55
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 1 LLSFYQIFHHRLAFFSRWLCCL 66
L + +F + FFS W+C L
Sbjct: 32 LYKIFVVFSFAVTFFSAWICAL 53
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 600 THRRPDRPGLTDMPFRWANM 659
THR+P P T RW M
Sbjct: 253 THRKPFHPASTQSLSRWIKM 272
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 333 DKSPNTTKDKSRTNSKCSKNSTNGSDKAK 247
+K PNT + +TN +T G +AK
Sbjct: 292 NKLPNTKNVRRKTNPAGVTTTTKGKVRAK 320
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 21.8 bits (44), Expect = 5.2
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +1
Query: 361 ERWYHHSHL 387
+ W+HHSH+
Sbjct: 48 QMWHHHSHM 56
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 21.8 bits (44), Expect = 5.2
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +1
Query: 361 ERWYHHSHL 387
+ W+HHSH+
Sbjct: 48 QMWHHHSHM 56
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 333 DKSPNTTKDKSRTNSKCSKNSTNGSDKAK 247
+K PNT + +TN +T G +AK
Sbjct: 292 NKLPNTKNVRRKTNPAGVTTTTKGKVRAK 320
>DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory
protein 11 protein.
Length = 127
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 291 SKCSKNSTNGSDK 253
SKCS+ NGS K
Sbjct: 76 SKCSETQKNGSKK 88
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.0 bits (42), Expect = 9.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 217 KTNDDINDSKDELKEQNQKLMDVDES 140
++ND+ D K L E+ QKL + S
Sbjct: 135 ESNDETKDGKVGLYERIQKLKKANPS 160
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 444 GKFVYPPFRTQFDPAKLNEQMRVMI 370
G V+PPFR + +++ Q+ V +
Sbjct: 78 GNLVFPPFRAEDYRQEVHAQVYVCL 102
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 78 THRCKTTQPTRKKSESMMKNL 16
T R ++ ++ KSES KNL
Sbjct: 249 TDRTQSMSESKNKSESAWKNL 269
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 78 THRCKTTQPTRKKSESMMKNL 16
T R ++ ++ KSES KNL
Sbjct: 249 TDRTQSMSESKNKSESAWKNL 269
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 78 THRCKTTQPTRKKSESMMKNL 16
T R ++ ++ KSES KNL
Sbjct: 249 TDRTQSMSESKNKSESAWKNL 269
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,790
Number of Sequences: 336
Number of extensions: 3583
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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