Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0109
(664 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 35 0.051
SB_39000| Best HMM Match : TolA (HMM E-Value=0.55) 34 0.12
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_54140| Best HMM Match : TFA (HMM E-Value=4.6) 33 0.27
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 33 0.27
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 33 0.27
SB_34536| Best HMM Match : DUF680 (HMM E-Value=2.1) 32 0.36
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_28346| Best HMM Match : BOP1NT (HMM E-Value=8.2e-14) 32 0.48
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 31 0.84
SB_11765| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027) 31 0.84
SB_40384| Best HMM Match : Filament (HMM E-Value=0.76) 31 1.1
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_34958| Best HMM Match : PkinA_anch (HMM E-Value=4.5) 31 1.1
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 31 1.1
SB_9039| Best HMM Match : M (HMM E-Value=0.00046) 31 1.1
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_51904| Best HMM Match : CH (HMM E-Value=0.0058) 30 1.5
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 30 1.5
SB_12617| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) 30 1.9
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 30 1.9
SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 30 1.9
SB_32006| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 29 2.6
SB_26066| Best HMM Match : RNA_pol_delta (HMM E-Value=3.1) 29 2.6
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 29 2.6
SB_9587| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 2.6
SB_56251| Best HMM Match : Phage_fiber_2 (HMM E-Value=4.7) 29 2.6
SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4) 29 2.6
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 29 2.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_11922| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_45381| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 3.4
SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 29 3.4
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.4
SB_1006| Best HMM Match : GPP34 (HMM E-Value=3.6) 29 3.4
SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3) 29 3.4
SB_47763| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 29 3.4
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 29 4.5
SB_24195| Best HMM Match : Sigma70_ner (HMM E-Value=1.1) 29 4.5
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 29 4.5
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_53774| Best HMM Match : efhand (HMM E-Value=0.012) 29 4.5
SB_43027| Best HMM Match : U79_P34 (HMM E-Value=0.066) 29 4.5
SB_28079| Best HMM Match : MCPsignal (HMM E-Value=0.00064) 29 4.5
SB_26882| Best HMM Match : MCPsignal (HMM E-Value=0.00063) 29 4.5
SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06) 29 4.5
SB_51066| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_41099| Best HMM Match : VWA (HMM E-Value=0) 28 5.9
SB_36679| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_5670| Best HMM Match : Tsg101 (HMM E-Value=2.5e-20) 28 5.9
SB_374| Best HMM Match : Fez1 (HMM E-Value=2.8) 28 5.9
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 28 5.9
SB_52650| Best HMM Match : DUF229 (HMM E-Value=0.6) 28 7.8
SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09) 28 7.8
SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35) 28 7.8
SB_28462| Best HMM Match : FYRC (HMM E-Value=1.9) 28 7.8
SB_57716| Best HMM Match : Phage_fiber_2 (HMM E-Value=4.3) 28 7.8
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_51020| Best HMM Match : BDV_P10 (HMM E-Value=1.9) 28 7.8
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 28 7.8
SB_38508| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 28 7.8
SB_21670| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-17) 28 7.8
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 28 7.8
SB_1562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 35.1 bits (77), Expect = 0.051
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -1
Query: 226 PCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANE 47
P K N++ D K E KE+N+ +E K KE E ++ + + +D +
Sbjct: 1878 PKKKENEE-EDDKKEKKEENE-----EEEKKKKKKENEEEDDKKNN--KEENEEDEKKEK 1929
Query: 46 KKKRVDDEKSDKKTK 2
KKK ++E+ DKK K
Sbjct: 1930 KKKEENEEEDDKKKK 1944
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -1
Query: 178 KEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKSDKKTK 2
K + K + +E K K+ EN + ++ + +D+ N K++ +DEK +KK K
Sbjct: 1874 KTFHPKKKENEEEDDKKEKKEENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKEKKKK 1932
>SB_39000| Best HMM Match : TolA (HMM E-Value=0.55)
Length = 576
Score = 33.9 bits (74), Expect = 0.12
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
Frame = -1
Query: 460 HIEEVWKIRLPPLQNAIRSCKIKRANESDDTIVRG*DT--CYGQG*IAEYNKRQEQDQF* 287
H +E+WK+ ++ A++ ++K+ NE VR D Y Q I + K +++++
Sbjct: 197 HEQEIWKLEQAEMERALQ--ELKQRNEQA-VKVRDDDIEFTYAQK-IRQLAKARDEEEKL 252
Query: 286 ML*ELYKWQ*QSEAEDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENS 107
E K + E ED L I + E +E ++ +++++ +KD K +
Sbjct: 253 RRWEEEKMKEDEEFEDKLKARTLILERKIKEQDREREEMERESQNLEQAGLKDFKTKQEK 312
Query: 106 RKRRRSCVTDTPVQDNTANEKKKRVD 29
R + + +E KKR D
Sbjct: 313 RLKEIGLAELFEEEQRKRDEAKKRND 338
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -1
Query: 202 INDSKDELKEQNQKLMDVDESAVKDT-KETENSRKRRRSCVTDTPVQDNTANEKKKRVDD 26
++ +DE++ N +L + D S++KDT K R+ ++ V + D+ E KK D+
Sbjct: 729 VSKLEDEVRFLNDELREADSSSIKDTEKLNAEIREFKKKIVELEKLVDDQEEEIKKLEDE 788
Query: 25 EKSDKKTK 2
K+ K K
Sbjct: 789 LKNVPKDK 796
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 256 QSEAEDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTD 77
QS A G+P + ++ ++EL+E QKL V++ + +E E K R V +
Sbjct: 543 QSAAPVAAGEPDFDDKEQLDMLENELREVKQKLEGVEKKYQQYREEKEPELKSLRDQVKN 602
Query: 76 TPVQDNTAN-EKKKRVDDEKSDKK 8
+ A KKK++DD K +K
Sbjct: 603 LGERLKDAEFVKKKQLDDLKKLQK 626
>SB_54140| Best HMM Match : TFA (HMM E-Value=4.6)
Length = 337
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/77 (25%), Positives = 40/77 (51%)
Frame = -1
Query: 235 LGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNT 56
+GQ ND +ND+ N+ MD+ S + +E ++S+ + + +D P +NT
Sbjct: 59 IGQSNKSLNDSLNDAPINTSNMNEP-MDMSSS---EQQEMQSSKTQLSTSSSD-PRLENT 113
Query: 55 ANEKKKRVDDEKSDKKT 5
+ ++++ D+ KKT
Sbjct: 114 TSTRQQQSDNADESKKT 130
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -1
Query: 220 NKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQ-DNTANEK 44
NKT+ +S+DEL+ + ES D + ++ + + S TDT +++++
Sbjct: 563 NKTDSSSEESEDELETSDDS--SSSESDTSDDESDDDHKSEKSSIATDTSEHPSDSSSDS 620
Query: 43 KKRVDDEKSD 14
DDE SD
Sbjct: 621 GDDSDDESSD 630
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/64 (21%), Positives = 34/64 (53%)
Frame = -1
Query: 199 NDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEK 20
++ K E+K+++ + E ++ ++ +K+ S + + ++ EKK+ DD+K
Sbjct: 448 DEEKTEVKKEDATVEIQKERTEEEESSSKEEKKQESSSKEEKKQESSSKEEKKQEKDDKK 507
Query: 19 SDKK 8
DK+
Sbjct: 508 DDKE 511
>SB_34536| Best HMM Match : DUF680 (HMM E-Value=2.1)
Length = 331
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = -1
Query: 256 QSEAEDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTD 77
Q+ +D C D D++ + + + DV + D + + + C TD
Sbjct: 192 QTNGKDHTDDECESEQRDGADNQSSRESEQSEKADVSTA---DDQSPSRVNESSQDCETD 248
Query: 76 TPVQ-DNTANEKKKRVDDEKSDKKTK 2
T ++ NEK VD ++ KKT+
Sbjct: 249 TKASLESAQNEKDHSVDKNETTKKTQ 274
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = -1
Query: 196 DSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKS 17
D K + K+ ++ L D ++ + K+ + K + +++ + E+K+R K
Sbjct: 206 DKKQKAKDSSESLSDSEDDRERRKKKVKKEIKHKAKDSSESSIDSEDDRERKERKKKNKK 265
Query: 16 DKKTK 2
+KK K
Sbjct: 266 EKKHK 270
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 211 NDDINDSKDELKEQNQKLM-DVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKK- 38
+ D +D E KE+ +K+ + + V + +TE +K R+ T P Q +KK
Sbjct: 30 SSDGDDDGGEKKEKRKKMKKEKERKGVPEDADTEMKKKERKEKETFEPEQKKKKKDKKAG 89
Query: 37 RVDDEKSDK 11
+V D+++ K
Sbjct: 90 KVRDDRARK 98
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -1
Query: 148 DESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKSDKKTK 2
DE +D K+ +KR+ D+ + + KKK+ +E+ K+ K
Sbjct: 107 DERKCEDRKDKTRKKKRKHDSSEDSDDNSSDVSAKKKQCKEERKRKRHK 155
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQ---DNTANEKKK 38
++ +DS+ LK++ K D S + + ++E+ RKRR+ V Q D++ +
Sbjct: 164 EESSDSEKRLKKEKNKEKQRDSS--ESSSDSEDDRKRRKKKVKKDKKQKAKDSSESLSDS 221
Query: 37 RVDDEKSDKKTK 2
D E+ KK K
Sbjct: 222 EDDRERRKKKVK 233
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = -1
Query: 214 TNDDINDSKDELKEQNQKLMDVDESAVKDTKET----ENSRKRRRSCVTDT---PVQDNT 56
+++ +DS+D+ K + +K+ + KD+ E+ E+ R+RR+ V +D++
Sbjct: 185 SSESSSDSEDDRKRRKKKVKKDKKQKAKDSSESLSDSEDDRERRKKKVKKEIKHKAKDSS 244
Query: 55 ANEKKKRVDDEKSDKKTK 2
+ D E+ ++K K
Sbjct: 245 ESSIDSEDDRERKERKKK 262
>SB_28346| Best HMM Match : BOP1NT (HMM E-Value=8.2e-14)
Length = 258
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVD 29
D+I + D+ ++ K +++ D K+ K+ T ++DN E +K VD
Sbjct: 67 DNIEEDDDDDANKDSKENNIEHDKNDDQKKNTERGKKPSKVNTPNIIKDNKLREAEKDVD 126
Query: 28 D-EKSDKK 8
D E SD++
Sbjct: 127 DTETSDEE 134
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = -1
Query: 217 KTNDDINDSKDELKEQNQKLMDVDES--AVKDTKETENSRKRRRSCVTDTPVQDNTANEK 44
K NDD + +DE ++ + + D+S A K+ ++++K+ +S D +D A E
Sbjct: 820 KKNDDEEEERDEEEDDEEDDDEEDDSKKASGKGKKGQDNKKKGKSKKDD---EDEEAEED 876
Query: 43 KKRVDDEKSDKKTK 2
++ K+DKK K
Sbjct: 877 GEKTKKGKTDKKDK 890
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -1
Query: 226 PCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANE 47
P +K D + K LKE K E KD +E E ++RR + ++ E
Sbjct: 885 PSDKEKKD--NEKARLKEMKDKEKIEKEKREKDKREREEKERKRRQQQLE---KEKKEKE 939
Query: 46 KKKRVDDEKSDKK 8
KK ++ EK +K+
Sbjct: 940 KKLLIEKEKREKE 952
>SB_11765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVD 29
+D++D+ D KE D+D+ V D + + + + V DN +K++ D
Sbjct: 23 EDVDDNNDIKKEDVDDNTDIDKEDVDDNNDIDKEDVDDNTDIDKEDVDDNNDIDKEEVDD 82
Query: 28 DEKSDKK 8
+ DK+
Sbjct: 83 NNDIDKE 89
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVD 29
+D++D+ D KE D+D+ V D + + + + V DN +K+ D
Sbjct: 45 EDVDDNNDIDKEDVDDNTDIDKEDVDDNNDIDKEEVDDNNDIDKEDVDDNNDIDKEDVDD 104
Query: 28 DEKSDKK 8
+ DK+
Sbjct: 105 NNDIDKE 111
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVD 29
+D++D+ D KE D+D+ V D + + + + V DN +K+ D
Sbjct: 56 EDVDDNTDIDKEDVDDNNDIDKEEVDDNNDIDKEDVDDNNDIDKEDVDDNNDIDKEDVDD 115
Query: 28 DEKSDK 11
+ DK
Sbjct: 116 NNDIDK 121
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVD 29
+D++D+ D KE D+D+ V D + + + + V DN +K+ D
Sbjct: 34 EDVDDNTDIDKEDVDDNNDIDKEDVDDNTDIDKEDVDDNNDIDKEEVDDNNDIDKEDVDD 93
Query: 28 DEKSDKK 8
+ DK+
Sbjct: 94 NNDIDKE 100
>SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027)
Length = 674
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = -1
Query: 211 NDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRV 32
++ I + + +LKEQN+KL + +K ++ E R+++ + D Q NE +RV
Sbjct: 445 DEQIEELERQLKEQNKKL-----TTIKRNQQLE--REKQAQLLNDVKKQ---GNEHDERV 494
Query: 31 DDEKSDKKTK 2
D+ + + KTK
Sbjct: 495 DEIRKELKTK 504
>SB_40384| Best HMM Match : Filament (HMM E-Value=0.76)
Length = 563
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = -2
Query: 507 QDILDSMQEAEEHIRNISRKYGKFVYPPFRTQF-DPAKLNEQMRVMIPSFEGEIRVTVKD 331
+D++ + EE + N +++ + +Y R D +L ++M + + E R
Sbjct: 161 EDLMAKFAKMEEELENQQKEHKEVIYNLERKAVVDKDRLKKEMVLRLNQVAAEFRKVSNK 220
Query: 330 KSPNTTKDKSRTNSKCSKNSTNGSDKAKQKI 238
+ TTK R N + SDK + I
Sbjct: 221 QMAETTKRTIRENVSINAQLAKMSDKTMELI 251
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = -1
Query: 256 QSEAEDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRR 92
Q E E L+ + N N+ + + +D ++E+N+ +++ + TKE + RR
Sbjct: 857 QQEVEVLIKKLANVENNQVKELRDWVREKNEHNAKLEQQVAQLTKEIAGLEETRR 911
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/70 (22%), Positives = 36/70 (51%)
Frame = -1
Query: 217 KTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKK 38
K+ DS+DE KE+ ++ + +E ++ +E +R+R + + E+KK
Sbjct: 420 KSETKNKDSEDEEKERKKREAEEEEERRREEEERREEEERKR----EEEERKQREEEEKK 475
Query: 37 RVDDEKSDKK 8
R ++E+ ++
Sbjct: 476 REEEERKQRE 485
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -1
Query: 220 NKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANE-- 47
+KT+ ++ K+ K + + DE + +E E +RRR ++ E
Sbjct: 406 SKTSSTTDEEKERKKSETKNKDSEDEEKERKKREAEEEEERRREEEERREEEERKREEEE 465
Query: 46 KKKRVDDEK 20
+K+R ++EK
Sbjct: 466 RKQREEEEK 474
>SB_34958| Best HMM Match : PkinA_anch (HMM E-Value=4.5)
Length = 342
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 217 KTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKR 98
+T+D++ D KDEL+++N+ L DE + KET S R
Sbjct: 185 ETSDELADLKDELQDKNEALSKCDEELLA-FKETSVSAVR 223
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 220 NKTNDDINDSKDELKEQN--QKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANE 47
+ + DD + ++E+K + +K D S+ D+ + K ++ TP + +++E
Sbjct: 91 SSSEDDSSSDEEEVKPKKDAKKAATEDSSSDDDSSGEDEDEKPKKKVEKKTPTKQESSSE 150
Query: 46 KKKRVDDEKSDKKTK 2
+ DD+ K K
Sbjct: 151 EDDSSDDKDEKPKKK 165
>SB_9039| Best HMM Match : M (HMM E-Value=0.00046)
Length = 716
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/81 (17%), Positives = 38/81 (46%)
Frame = -1
Query: 256 QSEAEDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTD 77
Q E E+++ + D +D++ +L + + + ++ E ++ + +
Sbjct: 472 QEEHEEVMAELAQDCADKRKMLQDDIASVESRLSNERQQVEQQRQQLEKEQEALKRVQAE 531
Query: 76 TPVQDNTANEKKKRVDDEKSD 14
Q+ +K+K++D+EKS+
Sbjct: 532 LENQEKDVEKKRKKLDEEKSN 552
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = -1
Query: 241 DLLGQPCNKTNDDINDSKDELKEQNQKLMDVD---ESAVKDTKETENSRKRR-RSCVTDT 74
D G+P + T D N +L + + + E+ ++ KE ++ +K+R R+ ++
Sbjct: 444 DKFGKPNDSTPQDWNKEHPDLSTPKKTALVAEIKKEAEEEEEKEPKSEKKKRKRTSDNES 503
Query: 73 PVQDNTANEKKKRVDDEKSDKK 8
++ T ++ KK D+K K+
Sbjct: 504 EKEETTPSKLKKSKKDKKKAKE 525
>SB_51904| Best HMM Match : CH (HMM E-Value=0.0058)
Length = 1187
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKR 35
D+I S D+ + + Q+L+D DE+ K +E E ++++++ ++ A E KR
Sbjct: 907 DEILRSVDDERNRVQRLLDEDEAKRKRQREEEEAKRKKKMDEEKAKKKELAAWEDAKR 964
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = -1
Query: 190 KDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVT---DTPVQ--DNTANEKKKRVDD 26
+ E K++ QK V ++ + E+SR+ R +T TP D+ K +DD
Sbjct: 430 ESEKKQRAQKKEQVGDNLADEDFPMEHSRREGRKYITVIKQTPCAYVDDLKGHIIKYIDD 489
Query: 25 EKSDKKTK 2
SDKK K
Sbjct: 490 NNSDKKIK 497
>SB_26913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = -1
Query: 220 NKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKK 41
+K + + SK+ ++ + DV E+ K+T + R+ +S DTP +D+T +++
Sbjct: 30 DKNSSNAKQSKESYQQFITESRDVPETEDVTPKKTRHRRQTSQSETIDTP-EDSTKKKRR 88
Query: 40 KR 35
K+
Sbjct: 89 KK 90
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = -1
Query: 190 KDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVT---DTPVQ--DNTANEKKKRVDD 26
+ E K++ QK V ++ + E+SR+ R +T TP D+ K +DD
Sbjct: 562 ESEKKQRAQKKEQVGDNLADEDFPMEHSRREGRKYITVIKQTPCAYVDDLKGHIIKYIDD 621
Query: 25 EKSDKKTK 2
SDKK K
Sbjct: 622 NNSDKKIK 629
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVD 29
DD +DS+ E K + K E +K ++ K + +DN + ++ ++
Sbjct: 676 DDGSDSEKEAKVKRHKEHKSGEKPKSKSKHKKSKDKEEHKEKRRSRHKDNDSAKEHRKSR 735
Query: 28 DEKSDKKTK 2
DE+ DKK K
Sbjct: 736 DEEGDKKKK 744
>SB_12617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVD 29
DD +DS+ E K + K E +K ++ K + +DN + ++ ++
Sbjct: 44 DDGSDSEKEAKVKRHKEHKSGEKPKSKSKHKKSKDKEEHKEKRRSRHKDNDSAKEHRKSR 103
Query: 28 DEKSDKKTK 2
DE+ DKK K
Sbjct: 104 DEEGDKKKK 112
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 145 ESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKSDKKTK 2
+SAV+ +K+ + K++ + +T NEK KR+ DEK K K
Sbjct: 1126 KSAVQSSKQPAKTSKKKANVEEETGPPLIANNEKDKRIKDEKDLKVMK 1173
>SB_56887| Best HMM Match : TolA (HMM E-Value=0.66)
Length = 404
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETEN---SRKRRRSCVTDTPVQDNTANEKKK 38
DD +D KD+ ++ D ++ +D E+ N S S + + D++ +EK
Sbjct: 195 DDDDDKKDDDDDKTDDDDDKKDAEKEDKDESGNESDSSSSSSSSSSSSSDDDDSDHEKDA 254
Query: 37 RVDDEKSDK 11
DDEK DK
Sbjct: 255 DDDDEKKDK 263
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -1
Query: 208 DDINDSKDELK--EQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQD-NTANEKKK 38
D+I+ +LK +NQ+L+D D +A+ KE + K R V+ Q + A E+++
Sbjct: 621 DEIDRLNRKLKWYAENQQLLDHDAAAL---KEKDKELKELRETVSRLRAQQGSAATERRQ 677
Query: 37 RVDDEKSDKK 8
R + SD K
Sbjct: 678 RSAERSSDAK 687
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 133 KDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKSDK 11
K +++T RS T+ P +DN + +K++DD+ DK
Sbjct: 226 KTSRKTSRKTSLNRSLTTNKP-EDNADEKPEKKLDDKSEDK 265
>SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025)
Length = 2182
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -1
Query: 175 EQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKS 17
++ ++L+D +AVK T ++ R+RRR+ ++ V + TA E + +D KS
Sbjct: 1634 DEEEQLIDSVFNAVKPTVSSQEGRRRRRA-TEESTVVEKTAAEVEAVMDIYKS 1685
>SB_32006| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 497
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 145 ESAVKDTKETENSRKRRRSCVTDTPVQ-DNTANEKKKRVDDEKSDKK 8
+S D++ETEN S TD+ D+TA KKK DE+S +K
Sbjct: 11 DSITDDSEETENHVPADESTATDSQASTDDTA--KKKVHPDERSSRK 55
>SB_26066| Best HMM Match : RNA_pol_delta (HMM E-Value=3.1)
Length = 240
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = -1
Query: 244 EDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQ 65
ED +PC +T +D +DS+DE + ++ D+ AV + E + S DT +
Sbjct: 146 EDNEKKPCKETKEDESDSEDESDDDDEG----DDDAVDEAFRAE-IKAALGSAAADTDSE 200
Query: 64 DNTANEKKKRVDDE 23
+++ E +DDE
Sbjct: 201 ESSGEE----LDDE 210
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -1
Query: 199 NDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEK 20
++S+ E + + K D D +DTKETE+ + R + V N E + DDE
Sbjct: 548 DESEKETETDDTKETD-DTKETEDTKETEDIKANERKKSESSSV-GNEEEESSEDDDDED 605
Query: 19 SDKK 8
D++
Sbjct: 606 DDEE 609
>SB_9587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -1
Query: 214 TNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKR 35
+N D +D D+ + K D+S K + ++ +R+ D+ + N + KR
Sbjct: 63 SNGDDDDDDDD--DSGSKRYGDDDSGTKRNDDYDDDNGTKRNGDNDSGTKGNDNDSGSKR 120
Query: 34 VDDEKSDKKTK 2
DD+ D +K
Sbjct: 121 NDDDYDDSDSK 131
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 217 KTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRR 95
K ND++ND +ELK++N L + KE E S + +
Sbjct: 603 KENDELNDRINELKKENDYLAKEIKDFANKRKEMETSYEEK 643
>SB_56251| Best HMM Match : Phage_fiber_2 (HMM E-Value=4.7)
Length = 105
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 145 ESAVKDTKETENSRKRRRSCVTDTPVQ-DNTANEKKKRVDDEKSDKK 8
+S D++ETEN S TD+ D+TA KKK DE+S +K
Sbjct: 11 DSITDDSEETENHVPADESTATDSQASTDDTA--KKKVHPDERSSRK 55
>SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4)
Length = 169
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -1
Query: 178 KEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKSDKK 8
K++ +K+ DV++ K ET +K++ D + +EKKK+ +K ++
Sbjct: 112 KKKKRKVEDVEDVEEKVEAETPKKKKKKSETTEDEIEESINTSEKKKKKKKKKQTEE 168
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 211 NDDINDSKDELKEQNQKLMDVDESAVK----DTKETENSRKRRRSCVTDTPVQDNTANEK 44
+DD ND D + K + DE+ K D ++ E+S + +C D+T N+
Sbjct: 1176 DDDDNDDDDTKNSDDDKEGESDENDKKQGDADHEDKEDSGDQDNNC-------DDTENQD 1228
Query: 43 KKRVDDEKSDKK 8
K DD K D K
Sbjct: 1229 KDDDDDSKDDDK 1240
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 250 EAEDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTK 122
E DL+ K ++ +ND KD+L ++N++L+D V D K
Sbjct: 1636 EKVDLVNSLHEKMSE-MNDEKDKLDDENKQLLDEKSREVTDLK 1677
>SB_11922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -1
Query: 214 TNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKR 35
+N D +D D+ + K D+S K + ++ +R+ D+ + N + KR
Sbjct: 2 SNGDDDDDDDD--DSGSKRYGDDDSGTKRNDDYDDDNGTKRNGDNDSGTKGNDNDSGSKR 59
Query: 34 VDDEKSDKKTK 2
DD+ D +K
Sbjct: 60 NDDDYDDSDSK 70
>SB_45381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Frame = -1
Query: 238 LLGQPCNKTNDDINDSKDELKEQNQKLMD-VDESAVKDTKETENSRKRRRSCVTDTP--- 71
++G + +DD + KD + + D VD+ + D ++ + V D
Sbjct: 5 MVGNDKDHVDDDTMNDKDHVDDDTMNDKDHVDDDTMNDKDHVDDDTMNDKDHVDDDTMND 64
Query: 70 ---VQDNTANEKKKRVDDEKSDK 11
V D+T N+K DD +DK
Sbjct: 65 KDHVDDDTMNDKDHVDDDTMNDK 87
>SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1436
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 542 SEKDPNNFRTKHRIYWTACRKPKSTFVTYR-GSMENSSTPPSERNSILQN*TSK 384
S K+ + KH + W C + K F+ ++ S + P E+ SIL SK
Sbjct: 726 SGKNTSQLSNKHPVNWLPCHQQKLKFLIFQLASPPVMAFPDFEKTSILHTDASK 779
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 460 HIEEVWKIRLPPLQNAIRSCKIK 392
H++++WK R L+ I+ CKI+
Sbjct: 218 HLDDLWKARKKTLEQCIKKCKIE 240
>SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = -1
Query: 241 DLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQD 62
+L+ P NKT ++N KD+ NQ V++ +++ + NS D +Q
Sbjct: 16 NLIHPPINKTATNVNKVKDQ--NGNQVEESVEKEVASESESSFNSSYEHTESAADVTLQ- 72
Query: 61 NTANEKKKRVDDEKSDKKTK 2
A K+ D E + +K K
Sbjct: 73 QLAAAKESFTDVEVTYQKFK 92
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/70 (18%), Positives = 31/70 (44%)
Frame = -1
Query: 217 KTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKK 38
+ D ++KD+ KE K + + ++ +T+N++ + + T + E K
Sbjct: 466 ENKDKTKENKDKTKENKDKTKENKDKTKENKDKTKNNKDKTKENKDKTNENKDKTKENKD 525
Query: 37 RVDDEKSDKK 8
+ + K+ K
Sbjct: 526 KTKENKNKTK 535
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/79 (17%), Positives = 32/79 (40%)
Frame = -1
Query: 244 EDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQ 65
E+L + N + + KD+ K K + + ++ +T+N++ + + T
Sbjct: 380 EELHSKGTNTVKNKTKNKKDKTKNNKDKTKENKDKTKENKDKTKNNKDKTKENKDKTKEN 439
Query: 64 DNTANEKKKRVDDEKSDKK 8
+ E K + + K K
Sbjct: 440 KDKTKENKDKTKENKDKTK 458
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -1
Query: 196 DSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKK--RVDDE 23
+S ++LKEQ + + E + K + SR + T V+ +NEKKK R D
Sbjct: 37 NSTEKLKEQYEDISSASEEPEPERKYSSISRSP-----SPTVVKKAKSNEKKKKPRKDSS 91
Query: 22 KSDKKTK 2
SD K K
Sbjct: 92 NSDTKKK 98
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 145 ESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKSDKK 8
+S KDT+E N K + +++ EKK+ + D+KSDK+
Sbjct: 536 KSEKKDTEEG-NKEKEKGDDKAKDKTEESKDGEKKEEIGDKKSDKE 580
>SB_1006| Best HMM Match : GPP34 (HMM E-Value=3.6)
Length = 426
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Frame = -1
Query: 220 NKTN--DDINDSKDELKEQNQKLMDVDESA--VKDTKETE---NSRKRRRSC---VTDTP 71
NK N +D+ + +EL E+ + + +E KD TE N K C +T+
Sbjct: 313 NKENPENDVTECNEELPEEGKPDTEKEEEKDEKKDDGSTEHKGNPEKAVEECNEELTEEA 372
Query: 70 VQDNTANEKKKRVDDEKSDKKT 5
D EKK + +D+K ++ T
Sbjct: 373 KPDTEREEKKNKNEDDKKEEGT 394
>SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3)
Length = 471
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = -1
Query: 205 DINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDD 26
DIN+++DEL + L + E ++ ENS C +D +N E K D+
Sbjct: 351 DINEAQDELGAEINALQNDMEEKRLQFEQDENS-----DCASDETGNENATTELKN--DE 403
Query: 25 EKSDKKTK 2
K KK K
Sbjct: 404 VKKGKKEK 411
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -1
Query: 217 KTNDDINDSKDE--LKEQNQKLMDVDESAVKDTKETEN-SRKRRRSCVTDTPVQDNTANE 47
K N D N +K E K +N+K E K T ET+N S +++SC + + E
Sbjct: 244 KQNFDENTTKQESGCKPKNKKRKKKKE---KKTNETDNESSIKKKSCEDSEDEEHLPSKE 300
Query: 46 KKKRVDDEKSDKK 8
KKK+ K +
Sbjct: 301 KKKKRKKSKDSSE 313
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = -1
Query: 244 EDLLGQPCNKT-----NDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVT 80
+++ GQ NK+ +DD D + + E+ ++ E +K + EN+ K+ C
Sbjct: 202 DEIHGQVKNKSKKKRGHDDDGDKEAVVSEEPKRSSSEQEVDIKQNFD-ENTTKQESGCKP 260
Query: 79 DTPVQDNTANEKKKRVDDEKSDKK 8
+ +K D+E S KK
Sbjct: 261 KNKKRKKKKEKKTNETDNESSIKK 284
>SB_47763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = -1
Query: 229 QPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKR 98
+PC+ DD +D ++E +E+ ++ + +E ++ +E E ++
Sbjct: 40 EPCDLMTDDDDDDEEEEEEEEEEEEEEEEKEEEEKEEEEEEEEK 83
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 214 TNDDINDSKDELKEQNQKLMDVDESAVKDTKETEN 110
+N D++ S +E EQ +K + E +VKDT +E+
Sbjct: 20 SNQDLSVSGNETAEQMEKSLKEGEESVKDTSASED 54
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/58 (20%), Positives = 32/58 (55%)
Frame = -1
Query: 181 LKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKSDKK 8
L+E+ ++L +++ + K E K+R + +QD E++KR+++ + +++
Sbjct: 277 LEEEKKRLEELERLKEEKDKMLEEELKKRETLEEKQKLQDKILEEERKRLENLEKERQ 334
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -1
Query: 226 PCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANE 47
P + I D+LKE +++ D+DE + D + + R ++ DT DNT E
Sbjct: 4090 PVGTDVETIEQQMDDLKELQKEVEDIDE-LIADLND-QKYRVALQNPTADTSAIDNTIAE 4147
Query: 46 KKKRV 32
+R+
Sbjct: 4148 LSQRL 4152
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = -1
Query: 253 SEAEDLLGQPCNKTNDDINDSKDELKEQNQ---KLMDVDESAVKD-TKETENSRKRRRSC 86
++++ L + C+KT DD+ D K +K Q + KL + + D TK + + RS
Sbjct: 621 TKSKALSAEGCSKTKDDVIDDKMRVKTQAEVIAKLKTAKGATIVDGTKYSAKQVQENRSS 680
Query: 85 VTDTPVQDNTANEKKKRVDDEKSDKKT 5
+ + +D+ N+ K + +K++
Sbjct: 681 I-GSAKEDDLNNKDKGTCPVTEKEKES 706
>SB_24195| Best HMM Match : Sigma70_ner (HMM E-Value=1.1)
Length = 270
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 253 SEAEDLLGQPCNKTNDDINDSKDELKEQNQKLMDV-DESAVKD 128
SEA+D+ Q + N+D D +DE+ E+ Q+ +D DE +K+
Sbjct: 11 SEADDV--QEDQEDNEDEEDVEDEVDEEEQEEVDASDEDNIKN 51
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -2
Query: 396 LNEQMRVMIPSFEGEIRVTVKDKSPNT---TKDKSRTNSKCSKNSTNGSDKAKQK 241
L EQ E EI T ++ +K KSR+NS+CS ST S K+K K
Sbjct: 1817 LKEQEEKRAAEDEDEILFTYSRENSTQVKKSKPKSRSNSRCSSKSTE-SKKSKGK 1870
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/57 (22%), Positives = 30/57 (52%)
Frame = -1
Query: 202 INDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRV 32
+N+S DEL+++++ L + D + + + SRK ++ D++ E+K +
Sbjct: 975 LNESVDELQQKDKSLKEKDGKLAELDQALKESRKEIKNREAQVSQMDSSMREQKTEI 1031
>SB_53774| Best HMM Match : efhand (HMM E-Value=0.012)
Length = 918
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = -1
Query: 253 SEAEDLLGQPCNKTNDDINDSKDELKEQNQ---KLMDVDESAVKD-TKETENSRKRRRSC 86
++++ L + C+KT DD+ D K +K Q + KL + + D TK + + RS
Sbjct: 770 TKSKALSAEGCSKTKDDVIDDKMRVKTQAEVIAKLKTAKGATIVDGTKYSAKQVQENRSS 829
Query: 85 VTDTPVQDNTANEKKKRVDDEKSDKKT 5
+ + +D+ N+ K + +K++
Sbjct: 830 I-GSAKEDDLNNKDKGTCPVTEKEKES 855
>SB_43027| Best HMM Match : U79_P34 (HMM E-Value=0.066)
Length = 443
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/77 (20%), Positives = 33/77 (42%)
Frame = -1
Query: 232 GQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTA 53
G+ K D + + +N+K D + + K + + +KR S D +++
Sbjct: 190 GESKTKDRSRSRDREKSKEPENEKKEDKRKDSAKSKGKDGDRKKREDSGKKDKDKENDKE 249
Query: 52 NEKKKRVDDEKSDKKTK 2
NE +++ DK+ K
Sbjct: 250 NEPRRKDRSRDKDKRDK 266
>SB_28079| Best HMM Match : MCPsignal (HMM E-Value=0.00064)
Length = 257
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -1
Query: 250 EAEDLLGQPCNKTNDDINDSKDELKEQNQKLMD-VDESAVKDTKETENSRKRRRSCVTDT 74
E D G+ KT D+I DS DE+ ++ K+ D E + K T+ + K S V T
Sbjct: 78 ELTDSTGE-ITKTKDEIIDSTDEITDRTDKITDRTGEITDRTDKITDRTGKITDSTVEIT 136
Query: 73 PVQDNTANEKKKRVD 29
N + D
Sbjct: 137 DSTGEITNSTGEITD 151
>SB_26882| Best HMM Match : MCPsignal (HMM E-Value=0.00063)
Length = 217
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -1
Query: 250 EAEDLLGQPCNKTNDDINDSKDELKEQNQKLMD-VDESAVKDTKETENSRKRRRSCVTDT 74
E D G+ KT D+I DS DE+ ++ K+ D E + K T+ + K S V T
Sbjct: 59 ELTDSTGE-ITKTKDEIIDSTDEITDRTDKITDRTGEITDRTDKITDRTGKITDSTVEIT 117
Query: 73 PVQDNTANEKKKRVD 29
N + D
Sbjct: 118 DSTGEITNSTGEITD 132
>SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1511
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = -1
Query: 202 INDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDE 23
+ D+ +++ E N + + V + ETE+ +++ V+D + E KRV++E
Sbjct: 1214 VGDAGEDIDEPNTFRITSKQRVVDFSAETEDEKEQWIKAVSDVIAEWKRKMESYKRVNEE 1273
Query: 22 K 20
K
Sbjct: 1274 K 1274
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/72 (22%), Positives = 36/72 (50%)
Frame = -1
Query: 244 EDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQ 65
EDL+G + D+I+ + E + + +L++ +E+ E S+++ R+C + +
Sbjct: 31 EDLMG----RLRDEISSLQTEFAKASDELVESNETIRTLETELAVSKEKHRTCALEVSKR 86
Query: 64 DNTANEKKKRVD 29
D T + +D
Sbjct: 87 DETVLSLQAELD 98
>SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06)
Length = 237
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 184 ELKEQNQKLMDVDESAVKDTK-ETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKSD 14
E++ Q ++L+D K T + EN + R+S PV+ N +++++ DE+ +
Sbjct: 168 EIEAQKERLIDTSGKIDKVTNADRENHGRDRKSSTEKIPVRVNQKQQREEKKLDEQPE 225
>SB_51066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/69 (21%), Positives = 29/69 (42%)
Frame = -1
Query: 220 NKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKK 41
N ND+ ND+ D+ + + D D+ + N+ K +C + ++ N+
Sbjct: 15 NNDNDNDNDNDDDDDDDDDDDDDDDDDDDNNNNNNNNNNKIICTCTNNNNNDNDNDNDDD 74
Query: 40 KRVDDEKSD 14
DD+ D
Sbjct: 75 DDDDDDDDD 83
>SB_41099| Best HMM Match : VWA (HMM E-Value=0)
Length = 3373
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = -3
Query: 359 RVRYVLRSRINRRIQQKTRAGPILNALRTLQMAVTKRSRRSTGAAL 222
RV V+ S RRI TRA + R L R RRSTG AL
Sbjct: 2476 RVGVVIYSSRARRILSLTRATGRRSVYRILGRIRATRGRRSTGRAL 2521
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = -3
Query: 359 RVRYVLRSRINRRIQQKTRAGPILNALRTLQMAVTKRSRRSTGAAL 222
RV V+ S RRI TRA + R L R RRSTG AL
Sbjct: 2872 RVGVVIYSSRARRILSLTRATGRRSVYRILGRIRATRGRRSTGRAL 2917
>SB_36679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/69 (23%), Positives = 29/69 (42%)
Frame = -1
Query: 220 NKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKK 41
N ND+ ND+ D+ + + D D+ D + +N+ + T+ DN +
Sbjct: 106 NNNNDNDNDNDDDDDDDDDDDDDDDDDDDDDDDDDDNNNNKIICTCTNNNNNDNDNDNDD 165
Query: 40 KRVDDEKSD 14
DD+ D
Sbjct: 166 DDDDDDDDD 174
>SB_5670| Best HMM Match : Tsg101 (HMM E-Value=2.5e-20)
Length = 315
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 208 DDINDSKDELKEQNQKLMDVDESAVKDTKETENS 107
D +N +++ELK +KL D+ K+ + EN+
Sbjct: 113 DQLNRTQEELKRGGEKLQDIVTKLQKEQADVENN 146
>SB_374| Best HMM Match : Fez1 (HMM E-Value=2.8)
Length = 239
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 223 CNKTNDDINDSKDELKEQNQKLMDVDE-SAVKDTKETENSRKRRRSCVTDTPVQDNTANE 47
C++T+D + + +E+ Q L+D E + ++ T +S R+ + Q+ ++E
Sbjct: 118 CSQTSDPVTEKDEEMMGQQNGLLDAQEGTGLEKTARISDSVPNLRTLLPSE--QNEISDE 175
Query: 46 KKKRVDDE 23
K R +E
Sbjct: 176 SKHRRKEE 183
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = -1
Query: 220 NKTNDDINDSKDELKEQNQKLMDVDESAVK-DTKETENSRKR--RRSCVTDTPVQDNTAN 50
N ND I + K+E K N+K + +E A+ DTKE +S+++ + ++ ++
Sbjct: 919 NVPNDTITE-KEEQKTINEK--NSNEKAISLDTKEESDSQEKVGEAAQPESNKIEATASS 975
Query: 49 EKKKRVDDEKSDK 11
+KKK + EK K
Sbjct: 976 DKKKDLAAEKVSK 988
>SB_52650| Best HMM Match : DUF229 (HMM E-Value=0.6)
Length = 558
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = -2
Query: 501 ILDSMQEAEEHIRNISRKYGK-FVYPPFRTQFDPAKLNEQMRVMIPSFEGEIRVTVKDKS 325
+LD + ++E ++ GK F + R P K + + ++ G I + + +
Sbjct: 156 VLDVLNTSKEW--DVVTVKGKIFAFKDQRMVGSPRKRLKLLEAVLDDGSGRISIDIWESH 213
Query: 324 PNTTKDKSRTNSKCSKNSTNGSDKAKQKIYWGSLVTKQMMIL 199
+ K + TN KC DKA + ++ K I+
Sbjct: 214 IDNVKTYTLTNDKCDSCGVKNDDKAVNTLAKNTVFLKDNTIV 255
>SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09)
Length = 818
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/78 (25%), Positives = 33/78 (42%)
Frame = -1
Query: 271 YKWQ*QSEAEDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRR 92
YK +E++D++ + +DD+ND E KE D KD + + R R
Sbjct: 715 YKGALMTESKDVMNDHDDVIDDDVNDETQEDKEDEPS--DGYHGDNKDYEGWRSPRSGYR 772
Query: 91 SCVTDTPVQDNTANEKKK 38
+N N+KK+
Sbjct: 773 RSGISGESHENRKNKKKE 790
>SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)
Length = 916
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -1
Query: 229 QPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTAN 50
Q N+ +D + +E +E+N LM+ D S ++ K ++ D ++N +
Sbjct: 143 QRANENEEDSGEDSEE-EEENGHLMNGD-SKTEEKKNANGKMGQKERHSEDEEEKENKDD 200
Query: 49 EKKKRVDDEKS-DKK 8
K DD+K D+K
Sbjct: 201 SKSADKDDDKGVDEK 215
>SB_28462| Best HMM Match : FYRC (HMM E-Value=1.9)
Length = 438
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 184 ELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKSDKKT 5
E EQ QK +D K KE E+ RKR + + N K R + K+D ++
Sbjct: 256 EKDEQLQKFSSIDVD--KLYKELEHERKRSADLEEKVKILKHKNNNKLYRKNASKADPRS 313
Query: 4 K 2
K
Sbjct: 314 K 314
>SB_57716| Best HMM Match : Phage_fiber_2 (HMM E-Value=4.3)
Length = 189
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -1
Query: 130 DTKETENSRK-RRRSCVTDTPVQDNTANEKKKR 35
+T E E ++K +RRSCV ++ T +++K+R
Sbjct: 155 NTAEMEKAQKNKRRSCVVESTTTGKTGSKQKRR 187
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = -1
Query: 217 KTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKK 38
K+N D+N +ELK +++ V + KD +E + +S + + E+ +
Sbjct: 242 KSNQDLNKITEELKSTLEEIEMVKKKGNKDLEEKVGVLSKEKSNLEKEANKYRKQREETQ 301
Query: 37 RVDDEKSDKKTK 2
+ +E + K +K
Sbjct: 302 KTCEELASKLSK 313
>SB_51020| Best HMM Match : BDV_P10 (HMM E-Value=1.9)
Length = 576
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -1
Query: 130 DTKETENSRK-RRRSCVTDTPVQDNTANEKKKR 35
+T E E ++K +RRSCV ++ T +++K+R
Sbjct: 506 NTAEMEKAQKNKRRSCVVESTTTGKTGSKQKRR 538
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -1
Query: 244 EDLLGQPCNKTNDDINDSKDELKEQNQKLMDV--DESAVKDTKETE--NSRKRRRSCVTD 77
ED + + + DD +D +DE E +++ D DE K++ + + N++ D
Sbjct: 91 EDEESEDDDDSFDDGDDEEDEDDEDDEEDSDDGDDEDDEKESGDGDAGNAKDEASGESDD 150
Query: 76 TPVQDNTANEK--KKRVDDEKSDKK 8
+ A +K KK+VD++K D+K
Sbjct: 151 AKPKTKDAEKKDDKKKVDEKKEDEK 175
>SB_38508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/69 (20%), Positives = 27/69 (39%)
Frame = -1
Query: 220 NKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKK 41
N ND+ ND D+ + + D D+ D + +++ + +N N+
Sbjct: 39 NNDNDNDNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNNNNNNKIICTCTNNNNNDNDND 98
Query: 40 KRVDDEKSD 14
DD+ D
Sbjct: 99 NDDDDDDDD 107
>SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3003
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 336 KDKSPNTTKDKSRTNSKC 283
KDK T KDK T+SKC
Sbjct: 1612 KDKDKETEKDKGETDSKC 1629
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/61 (19%), Positives = 32/61 (52%)
Frame = -1
Query: 190 KDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTANEKKKRVDDEKSDK 11
K++ +++ + +E + KE + KR++ + +++ E+KK+ ++E+ K
Sbjct: 361 KEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEINAKIEEKKKREEKKKQEEEEKMK 420
Query: 10 K 8
K
Sbjct: 421 K 421
>SB_21670| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-17)
Length = 237
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = -1
Query: 229 QPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTDTPVQDNTAN 50
+P + N+++ E+ E ++ + + V+D E E RR T V+D+ N
Sbjct: 139 KPASTQNEELLQDAPEVDETPTEMTEDIPTEVEDDDENEEDGDDRRRNHIPTEVEDDDEN 198
Query: 49 EK 44
E+
Sbjct: 199 EE 200
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 193 SKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCV-TDTPVQDNTANEKKKRVDDEKS 17
S+ L E+ + +D +KD KET KRR S + D + N E K+++ + S
Sbjct: 867 SEKILNEELRHALDAKNRDIKDLKETVVKFKRRISQIQVDIDILMNEKTELAKQIEKQVS 926
>SB_1562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = -1
Query: 250 EAEDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDES---AVKDTKETENSRKRRRSCVT 80
+ E L N N + D+K + ++ D+ E+ +V+ ++ E SRKR T
Sbjct: 373 KGEKLFSSELNVQNSEKVDTKISQTKGKEQYEDLSENLFLSVETREKGETSRKRVTKKGT 432
Query: 79 DTPVQDNTA-----NEKKKRVDDEK-SDKKT 5
+ D+++ +EK +++ D K S++KT
Sbjct: 433 ENSADDSSSAPKGTSEKPRQLKDRKDSEQKT 463
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,390,231
Number of Sequences: 59808
Number of extensions: 478856
Number of successful extensions: 2520
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 2064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2492
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -