Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0109
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    26   0.92 
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   4.9  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   6.5  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   6.5  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   6.5  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   8.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   8.6  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 530 DPSPSTGSNLWPAPRPDRWGARKNAPST 613
           +P     SN WP PRP+ +   +  P +
Sbjct: 52  EPQTRARSNTWPLPRPENFVEPETEPDS 79


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 12/72 (16%), Positives = 36/72 (50%)
 Frame = -1

Query: 256  QSEAEDLLGQPCNKTNDDINDSKDELKEQNQKLMDVDESAVKDTKETENSRKRRRSCVTD 77
            + E+  LL +   + +      + + ++Q++      ++++  T++   + +  +   TD
Sbjct: 887  EPESHKLLAENYRQQHQQQQQQQQQQQQQHEHEQQQQQNSMLATQQRLEASQMDQG--TD 944

Query: 76   TPVQDNTANEKK 41
             P+Q++  NE+K
Sbjct: 945  QPMQESPCNEEK 956


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 235 LGQPCNKTNDDINDSKDELKEQNQKLMDVD 146
           L   CN+ N+D  D +D+         +VD
Sbjct: 9   LNDKCNRYNEDEEDEEDDFINSQSPSNEVD 38


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 235 LGQPCNKTNDDINDSKDE 182
           L   CN+ NDD  D +D+
Sbjct: 118 LNDKCNRYNDDEEDEEDD 135


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -2

Query: 426 PFRTQFDPAKLNEQMRVMIPSFEGEIRVTVKDKSPNTTKDKS 301
           P R   DP K        +P   GE  V V  + P+T  +K+
Sbjct: 358 PLRKVGDPTKRFGSYAFRLPDSNGEHGVWVSYEDPDTAGNKA 399


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -3

Query: 611 STVRFFGRPTDRAWVPAKDCFLYSEKDP--NNFRTK 510
           + ++F GRPTD     A D  L++ ++     F TK
Sbjct: 495 TAIQFLGRPTDADRYDAHDYHLHTGRNAMVKEFATK 530


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 551 SNLWPAPRPDRWGARKNAPSTRPA 622
           S+L+P   P  W    +AP+T P+
Sbjct: 461 SDLFPTHPPVSWPVSSDAPTTVPS 484


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,201
Number of Sequences: 2352
Number of extensions: 16318
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)