Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0108
         (673 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g47885.1 68414.m05331 leucine-rich repeat family protein cont...    30   1.2  
At1g32980.1 68414.m04062 subtilisin-like serine protease-related...    28   6.5  

>At1g47885.1 68414.m05331 leucine-rich repeat family protein
           contains 2 leucine rich-repeat (LRR) domains
           Pfam:PF00560, INTERPRO:IPR001611
          Length = 107

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 554 PGAEPKPACLPLKLPNLRITISNNLIYKI 640
           PGA+PKPA   L L N+ +  +NN   +I
Sbjct: 17  PGAKPKPAATQLSLSNIFLGFNNNFTGEI 45


>At1g32980.1 68414.m04062 subtilisin-like serine protease-related
           similar to subtilase SP1 [Oryza sativa] GI:9957714
          Length = 276

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +2

Query: 560 AEPKPACLPLKLPNLRITISNNLIYKILVSQMVVTHTP 673
           A PKP+ L LKLP++ I    NL  ++++++ V    P
Sbjct: 199 ANPKPSVLDLKLPSITIP---NLAKEVIITRTVTNVGP 233


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,418,104
Number of Sequences: 28952
Number of extensions: 259596
Number of successful extensions: 530
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)