Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0106
(574 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 186 1e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 186 1e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 4e-19
SB_54| Best HMM Match : Actin (HMM E-Value=0) 71 7e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 60 2e-09
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 57 9e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 4e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.072
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.51
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 30 1.2
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_15897| Best HMM Match : DUF134 (HMM E-Value=7.5) 29 3.6
SB_29378| Best HMM Match : NHL (HMM E-Value=8.3) 28 4.7
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10) 27 8.2
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_49523| Best HMM Match : 7tm_1 (HMM E-Value=3.2e-37) 27 8.2
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 27 8.2
SB_18995| Best HMM Match : rve (HMM E-Value=0.0012) 27 8.2
SB_1662| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFN+PA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPA 132
Score = 97.9 bits (233), Expect = 5e-21
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 186 bits (452), Expect = 1e-47
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFN+PA
Sbjct: 108 APLNPKANREKMTQIMFETFNSPA 131
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +2
Query: 119 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 133 YVAIQAVLSLYASG 146
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 186 bits (452), Expect = 1e-47
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFN+PA
Sbjct: 108 APLNPKANREKMTQIMFETFNSPA 131
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +2
Query: 119 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 133 YVAIQAVLSLYASG 146
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFN+PA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPA 132
Score = 102 bits (244), Expect = 2e-22
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 186 bits (452), Expect = 1e-47
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFN+PA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPA 132
Score = 97.9 bits (233), Expect = 5e-21
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +2
Query: 119 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 89.4 bits (212), Expect = 2e-18
Identities = 40/43 (93%), Positives = 40/43 (93%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 384
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 96 YVAIQAVLSLYASG 109
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 457 NREKMTQIMFETFNTPA 507
N + M +IMFETFN+PA
Sbjct: 78 NWDDMEKIMFETFNSPA 94
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +1
Query: 262 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 438
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 439 PLNPKANREKMTQIMFETF 495
PLNP NREKM ++MFE +
Sbjct: 113 PLNPMKNREKMIEVMFENY 131
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 131 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 229
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 489 NIQHARQYVAIQAVLSLYASG 551
N Q Y+AIQAVL+LYA G
Sbjct: 130 NYQFEGVYIAIQAVLTLYAQG 150
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +1
Query: 364 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 504
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVP 2175
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 137 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 238
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVA+QAV++LYASG
Sbjct: 2178 YVAVQAVMALYASG 2191
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 238
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +1
Query: 322 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 501
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 502 PA 507
PA
Sbjct: 63 PA 64
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 57.2 bits (132), Expect = 9e-09
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +1
Query: 412 EHPVLLTEAPLNPKANREKMTQIMFETFNTPA 507
+HPVLLTEAPLNP+ NREK ++ FETFN PA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPA 157
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = +1
Query: 265 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 429
D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 283 DFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 107 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 253
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.054
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -1
Query: 235 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 119
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 34.3 bits (75), Expect = 0.072
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = +1
Query: 247 GR*GQKDS---YVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 408
GR G+ DS VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 409 EEHPVLLTEAPLNPKANRE 465
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.072
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 271 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 393
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 125 EVAALVVDNGSGMCKAGFAGDDAPRAV 205
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 210 GNTARGASSPAKPALHIPEPLSTT 139
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 210 GNTARGASSPAKPALHIPEPLSTT 139
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 118 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPC 2
A L L+KL CRC K +R + + + IP C C
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLC 1334
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = -2
Query: 294 ALCLISYIRVLLSLPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTT 139
+L L + IR L P W GNT R PAKP+L++P P S T
Sbjct: 512 SLPLDAKIRHYNRLSNQYPKWLQQVKDGGNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 12 YVAIQAVLSLYASG 25
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 106 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPC 2
L++L C C+K + KR + + Q+P C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQC 654
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = -1
Query: 211 GKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCD 77
G+HC + I C G GA GN+ E C D
Sbjct: 724 GRHCEKDIDECSLGYCKNGATCTNTPGNYSCQCTEFTNGTNCELD 768
>SB_15897| Best HMM Match : DUF134 (HMM E-Value=7.5)
Length = 311
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +1
Query: 352 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPASTSPSKPC 531
DD E+IW E TE + P+ R T I NTP+STS +P
Sbjct: 150 DDNEEIWEEGKDGEQVEVTVHVNGQNTEGEIEPEV-RTVQTPISSTPLNTPSSTSHGRPE 208
Query: 532 SRCTR 546
R R
Sbjct: 209 KRLKR 213
>SB_29378| Best HMM Match : NHL (HMM E-Value=8.3)
Length = 255
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 491 HSTRPPVRRHPSRALAVRVRSVPPGIR 571
HS P + P R L ++ R VP G+R
Sbjct: 127 HSAAPETVKFPVRPLIIKTREVPQGLR 153
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 210 GNTARGASSPAKPALHIPEPLSTT 139
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 210 GNTARGASSPAKPALHIPEPLSTT 139
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1164
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 491 HSTRPPVRRHPSRALAVRVRSVPPGIR 571
HS P + P R L ++ R +P G+R
Sbjct: 887 HSAAPETVKFPVRPLIIKTREIPRGLR 913
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 225 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 115
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_49523| Best HMM Match : 7tm_1 (HMM E-Value=3.2e-37)
Length = 366
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 266 SFCPYRPSRPDGGAFPRSRETLREEHHLLRS 174
SFC +R R G F R + TLR H +S
Sbjct: 213 SFCYFRVFRAVGNHFTRVKPTLRSHHRTQQS 243
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 430 TEAPLNPKANREKMTQIMFETFNTPASTSPSKPCSRCTRPVRTT 561
T+AP+NP Q+ + P++T+P P + P+ T
Sbjct: 169 TQAPINPTPINSNSHQLQLLSTLIPSTTAPINPAAINPTPINPT 212
>SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)
Length = 1225
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 230 GAFPRSRETLREEHHLLRSRPCTYRS 153
G +P S++T R E + +RPCT S
Sbjct: 832 GCYPWSKQTFRHEGPPISARPCTAMS 857
>SB_1662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 369 NLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSLPTITP 238
NL +P S+ + D V + D +F L ISY RVL L + P
Sbjct: 74 NLASSLPASECNYLDYV-KATDNTFQLHKISYTRVLELLQNLDP 116
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,721,576
Number of Sequences: 59808
Number of extensions: 493664
Number of successful extensions: 1453
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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