Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0106
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 187 4e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 187 4e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 187 4e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 187 4e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 187 4e-48
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 187 4e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 187 4e-48
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 187 4e-48
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 187 4e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 187 4e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 186 1e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 117 7e-27
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 103 9e-23
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 103 9e-23
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 102 2e-22
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 102 2e-22
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 93 1e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 91 7e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.005
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.005
Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical p... 28 5.4
Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical p... 28 5.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.2
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.2
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.2
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.2
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.5
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 27 9.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 27 9.5
AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 103 bits (247), Expect = 9e-23
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 102 bits (244), Expect = 2e-22
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 103 bits (247), Expect = 9e-23
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 103 bits (247), Expect = 9e-23
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 187 bits (456), Expect = 4e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 103 bits (247), Expect = 9e-23
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 100 bits (240), Expect = 6e-22
Identities = 43/51 (84%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 103 bits (247), Expect = 9e-23
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 187 bits (456), Expect = 4e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 65 APLNPKANREKMTQIMFETFNTPA 88
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 90 YVAIQAVLSLYASG 103
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 187 bits (456), Expect = 4e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 95 APLNPKANREKMTQIMFETFNTPA 118
Score = 64.9 bits (151), Expect = 4e-11
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +2
Query: 167 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
+AGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 120 YVAIQAVLSLYASG 133
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 187 bits (456), Expect = 4e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 103 bits (247), Expect = 9e-23
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 134 YVAIQAVLSLYASG 147
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 186 bits (452), Expect = 1e-47
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPK+NREKMTQIMFETFNTPA
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPA 131
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +2
Query: 119 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YV IQAVLSLYASG
Sbjct: 133 YVNIQAVLSLYASG 146
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 117 bits (281), Expect = 7e-27
Identities = 48/82 (58%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 441
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 442 LNPKANREKMTQIMFETFNTPA 507
LNP NRE+ +I FETFN PA
Sbjct: 114 LNPLKNRERSAEIFFETFNVPA 135
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 137 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 253
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 103 bits (247), Expect = 9e-23
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 369
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 103 bits (247), Expect = 9e-23
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 369
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 102 bits (244), Expect = 2e-22
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 369
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 102 bits (244), Expect = 2e-22
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 360
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 93.1 bits (221), Expect = 1e-19
Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +1
Query: 262 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEA 438
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 439 PLNPKANREKMTQIMFETF 495
PLNP +NREKM Q+MFE +
Sbjct: 113 PLNPNSNREKMFQVMFEQY 131
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 137 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 229
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVA+QAVL+LYA G
Sbjct: 137 YVAVQAVLTLYAQG 150
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 90.6 bits (215), Expect = 7e-19
Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 265 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 441
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 442 LNPKANREKMTQIMFETFNTP 504
LN NRE +IMFE+FN P
Sbjct: 124 LNTPENREYTAEIMFESFNVP 144
Score = 36.7 bits (81), Expect = 0.012
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 113 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 220
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +1
Query: 325 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 504
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 505 A 507
A
Sbjct: 154 A 154
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 220
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 259 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 432
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 433 EAPLNPKANREKMTQIMFETF 495
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 259 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 432
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 433 EAPLNPKANREKMTQIMFETF 495
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical
protein F14E5.4 protein.
Length = 408
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +1
Query: 316 KYPIEHGIVT--NWDDMEKIWHHTFYNELRVAPEEHPVL-LTEAPLNPKANREKMTQIMF 486
KYP + ++ W D K + FY + + E+H ++ +T+ N K R + Q
Sbjct: 304 KYPEYNSMIIFETWKDNGKYFVKVFYKKEEITAEDHELIDVTKFVRNCKRER-CLAQDFL 362
Query: 487 ETFNTPASTSPSKPCSRCTRPVRTTRYS 570
+ + + ++ C +RTTR S
Sbjct: 363 DCCDDYRNKGEAESCEASDLKIRTTRSS 390
>Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 367 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPASTS 516
I ++T N L ++ + + E NP N +KM I+ E F T S S
Sbjct: 135 ILNNTKLNNLNISSLSNSNNIVEIKNNPNLNLQKMCSIIHEVFFTRRSIS 184
>Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 367 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPASTS 516
I ++T N L ++ + + E NP N +KM I+ E F T S S
Sbjct: 135 ILNNTKLNNLNISSLSNSNNIVEIKNNPNLNLQKMCSIIHEVFFTRRSIS 184
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 167 KAGFAGDDAPRAVFPSIVGRPRHQG 241
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 192 ASSPAKPALHIPEPLSTTNAATSS 121
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 192 ASSPAKPALHIPEPLSTTNAATSS 121
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 192 ASSPAKPALHIPEPLSTTNAATSS 121
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 192 ASSPAKPALHIPEPLSTTNAATSS 121
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 319 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 420
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 319 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 420
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 405 PRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARQYVAIQA 527
P G P+ AY PQ QGQQ P + QH Q QA
Sbjct: 630 PGGPPQQAYRYPPQ-QGQQYSPYPPPQQQQQHQAQQAQSQA 669
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 405 PRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARQYVAIQA 527
P G P+ AY PQ QGQQ P + QH Q QA
Sbjct: 630 PGGPPQQAYRYPPQ-QGQQYSPYPPPQQQQQHQAQQAQSQA 669
>AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical
protein F33E11.6b protein.
Length = 447
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 412 EHPVLLTEAPLNPKANREKMTQIMFETFNTPASTSPSKPCSRCTR 546
E + EA LN + M QI E P PS+PC C +
Sbjct: 297 EEAMRAREATLNTTP-QSSMAQIKQEPSYIPPPIDPSRPCDSCEK 340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,647,583
Number of Sequences: 27780
Number of extensions: 336783
Number of successful extensions: 1167
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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