Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0106
(574 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 3e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 4e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 4e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 1e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 2e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 2e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 8e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 8e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 8e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 161 4e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 152 2e-37
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 149 1e-36
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 99 1e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 90 1e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 5e-16
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 68 4e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 52 3e-07
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 49 2e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 45 3e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 33 0.10
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.6
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 29 1.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.2
At5g56630.1 68418.m07070 phosphofructokinase family protein simi... 28 5.1
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.7
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 27 6.7
At2g25680.1 68415.m03078 expressed protein ; expression supporte... 27 6.7
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 27 6.7
At5g21930.1 68418.m02545 ATPase E1-E2 type family protein / halo... 27 8.9
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 8.9
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 8.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 3e-47
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPA 133
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 135 YVAIQAVLSLYASG 148
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPA 133
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 135 YVAIQAVLSLYASG 148
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFNTPA
Sbjct: 110 APLNPKANREKMTQIMFETFNTPA 133
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 135 YVAIQAVLSLYASG 148
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 1e-46
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFN PA
Sbjct: 110 APLNPKANREKMTQIMFETFNVPA 133
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 135 YVAIQAVLSLYASG 148
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFN PA
Sbjct: 110 APLNPKANREKMTQIMFETFNAPA 133
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 135 YVAIQAVLSLYASG 148
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 80/84 (95%), Positives = 82/84 (97%)
Frame = +1
Query: 256 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 436 APLNPKANREKMTQIMFETFNTPA 507
APLNPKANREKMTQIMFETFN PA
Sbjct: 110 APLNPKANREKMTQIMFETFNAPA 133
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVG ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 135 YVAIQAVLSLYASG 148
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (437), Expect = 8e-46
Identities = 78/83 (93%), Positives = 83/83 (100%)
Frame = +1
Query: 259 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 438
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 439 PLNPKANREKMTQIMFETFNTPA 507
PLNPKANREKMTQIMFETFN+PA
Sbjct: 111 PLNPKANREKMTQIMFETFNSPA 133
Score = 80.2 bits (189), Expect = 9e-16
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVG +++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 135 YVAIQAVLSLYASG 148
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (437), Expect = 8e-46
Identities = 78/83 (93%), Positives = 83/83 (100%)
Frame = +1
Query: 259 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 438
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 439 PLNPKANREKMTQIMFETFNTPA 507
PLNPKANREKMTQIMFETFN+PA
Sbjct: 111 PLNPKANREKMTQIMFETFNSPA 133
Score = 80.2 bits (189), Expect = 9e-16
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVG +++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 135 YVAIQAVLSLYASG 148
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (437), Expect = 8e-46
Identities = 78/83 (93%), Positives = 83/83 (100%)
Frame = +1
Query: 259 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 438
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 439 PLNPKANREKMTQIMFETFNTPA 507
PLNPKANREKMTQIMFETFN+PA
Sbjct: 111 PLNPKANREKMTQIMFETFNSPA 133
Score = 80.2 bits (189), Expect = 9e-16
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVG +++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
YVAIQAVLSLYASG
Sbjct: 135 YVAIQAVLSLYASG 148
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 161 bits (390), Expect = 4e-40
Identities = 67/83 (80%), Positives = 79/83 (95%)
Frame = +1
Query: 259 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 438
+KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEA
Sbjct: 52 EKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEA 111
Query: 439 PLNPKANREKMTQIMFETFNTPA 507
PLNPK NREKMTQIMFE+F P+
Sbjct: 112 PLNPKVNREKMTQIMFESFAFPS 134
Score = 83.8 bits (198), Expect = 7e-17
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGRDRR 265
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVG D +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 510 YVAIQAVLSLYASG 551
Y+ IQAVLSLY+SG
Sbjct: 136 YIGIQAVLSLYSSG 149
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 152 bits (368), Expect = 2e-37
Identities = 64/83 (77%), Positives = 77/83 (92%)
Frame = +1
Query: 259 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 438
+ D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEA
Sbjct: 6 ENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEA 65
Query: 439 PLNPKANREKMTQIMFETFNTPA 507
PLNPKA+REKMTQIMFETF P+
Sbjct: 66 PLNPKADREKMTQIMFETFAVPS 88
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 149 bits (362), Expect = 1e-36
Identities = 68/89 (76%), Positives = 75/89 (84%)
Frame = +1
Query: 241 RDGR*GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 420
RDG +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGL-NPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 421 VLLTEAPLNPKANREKMTQIMFETFNTPA 507
VLLTEAP NPKANREKMTQIMFE+F+ PA
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPA 122
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2
Query: 137 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 232
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 99 bits (238), Expect = 1e-21
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +1
Query: 262 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 441
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 442 LNPKANREKMTQIMFETFN 498
LNP NREKM + MFE +N
Sbjct: 111 LNPSKNREKMIETMFEKYN 129
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 137 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 229
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 89.8 bits (213), Expect = 1e-18
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Frame = +1
Query: 265 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 435
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 436 APLNPKANREKMTQIMFETFNTP 504
+PL P +RE +I+FETFN P
Sbjct: 127 SPLTPPESREYTGEILFETFNVP 149
Score = 35.9 bits (79), Expect = 0.019
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 134 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 220
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 81.0 bits (191), Expect = 5e-16
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +1
Query: 271 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 447
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 448 PKANREKMTQIMFETFNTPASTSPSKP 528
+ REK ++MFE + PA P
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNP 162
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 223
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 432
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 433 EAPLNPKANREK 468
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 7e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 122 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 223
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 322 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 498
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 134 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 226
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +1
Query: 313 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 492
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 493 F 495
F
Sbjct: 121 F 121
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 137 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 229
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 322 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 498
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 499 TPA 507
PA
Sbjct: 145 VPA 147
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 137 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 238
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.5 bits (73), Expect = 0.10
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -2
Query: 372 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVL-LSLPTITP*WRGLPTIEGNT 202
P L V+ ++ D + + + + YI + + P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 201 ARGASSPAKPALHIPEPLSTTNAATSS 121
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.6
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 234 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 148
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 1.6
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -2
Query: 423 DGVFLGGDTQLIVEGMMPNLLHVIPVS 343
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 448 PKANREKMTQIMFETFNTPASTSPSKPCSRCTRPV 552
P NRE + + + + A ++P PC RC PV
Sbjct: 536 PPPNREFILKPTKKMLHIQAESTPGSPCPRCPEPV 570
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 280 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 459
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 460 REK 468
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 280 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 459
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 460 REK 468
REK
Sbjct: 225 REK 227
>At5g56630.1 68418.m07070 phosphofructokinase family protein similar
to phosphofructokinase [Amycolatopsis methanolica]
GI:17432243; contains Pfam profile PF00365:
Phosphofructokinase
Length = 485
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 307 GYLFCSVPHLLHKSPSVPTDHHALMAGPSH 218
GY+ VPHL+ P +PT + L P++
Sbjct: 17 GYILQDVPHLIDYLPDLPTYPNPLQDNPAY 46
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 368 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 279
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 234 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 112
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 572 HEYRVVRTGRVQREHGLD-GDVLAGVLNVSNMIWVI 468
H++R + TG+++++ D G G N + M+W I
Sbjct: 2335 HDFRFIATGKMKKQRNPDGGSSTDGDQNKNGMLWYI 2370
>At2g25680.1 68415.m03078 expressed protein ; expression supported
by MPSS
Length = 456
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2
Query: 420 GVFLGGDTQLI-VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIR 268
G+ GG ++ + G+M + ++IP+S V G+ Q +FA+ + YIR
Sbjct: 114 GICTGGILFVLGISGLMQLVFNIIPLS---VVRGIQLSQGLAFAMSAVKYIR 162
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 360 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLS 256
HVIPV+ + +F+ QD FA ++Y + +LS
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILS 138
>At5g21930.1 68418.m02545 ATPase E1-E2 type family protein /
haloacid dehalogenase-like hydrolase family protein /
heavy-metal-associated domain-containing protein
contains InterPro accession IPR001757: ATPase, E1-E2
type; contains Pfam profiles PF00403:
Heavy-metal-associated domain, PF00702: haloacid
dehalogenase-like hydrolase
Length = 883
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -3
Query: 527 GLDGDVLAGVLNVSNMIWVIFSLLALGLRGASVSRTGCSSGATRSSL 387
G DGD LA L ++ + V+ ALGL + G S GA R L
Sbjct: 483 GPDGDALALSLKLAVDVLVVSCPCALGLATPTAILIGTSLGAKRGYL 529
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 419 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 261
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 346 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 495
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,985,824
Number of Sequences: 28952
Number of extensions: 319248
Number of successful extensions: 963
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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