Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0105
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   2.3  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   4.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.1  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.4  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.4  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 340 SSGRSPKTRHLGSS*STNGA 281
           SSGRSP+TR +    +  GA
Sbjct: 204 SSGRSPRTRRVKKPGAKQGA 223


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = -1

Query: 427 TTSIKRLDTRTLSYVAAGNYIPDPADRMESSGRSP 323
           TT +  +    +     GN  P P    E+SG  P
Sbjct: 133 TTGVNFMKLDEIEVKVTGNDAPPPITSFETSGLRP 167


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = -2

Query: 372 TTFPILRTEWKAVDGRPKHVISDPPDPL 289
           T +PIL+   + + G    ++   P P+
Sbjct: 370 TKYPILKAIHQTLGGSSNEIVEPVPQPV 397


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 303 PPDPLTVLLGTSSTGHLLVEP 241
           PP  + + LGT   G  L +P
Sbjct: 253 PPSKINLGLGTYGRGFALADP 273


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 484 FNVGLLAGARSHRTCSVI 431
           FN+GL   +R+HR  ++I
Sbjct: 452 FNMGLFDTSRNHRDRAMI 469


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 484 FNVGLLAGARSHRTCSVI 431
           FN+GL   +R+HR  ++I
Sbjct: 452 FNMGLFDTSRNHRDRAMI 469


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 484 FNVGLLAGARSHRTCSVI 431
           FN+GL   +R+HR  ++I
Sbjct: 452 FNMGLFDTSRNHRDRAMI 469


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 484 FNVGLLAGARSHRTCSVI 431
           FN+GL   +R+HR  ++I
Sbjct: 452 FNMGLFDTSRNHRDRAMI 469


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,768
Number of Sequences: 336
Number of extensions: 2407
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)