Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0105
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   1.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   3.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   6.6  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   8.8  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 278 KSTVSGSGGSEMTCFGRPSTAFHSVRRIGNVVTGGHI*EGSR 403
           ++ +S S     T    PS AF+  RRI    + G + EGSR
Sbjct: 121 QAALSESDPESATSKAHPS-AFYDARRINEYQSDGRLAEGSR 161


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 272 VPKSTVSGSGGSEMTCFGRPSTAFHSVRRIGNVVTGGHI 388
           +  S++ G GGS  +  G      HSV     V  GG +
Sbjct: 671 IGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGV 709


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 172 SGEKLSGLCLRVNLLVEPFVASDGFDEKV 258
           SG+ L   CL    LV+    +DG D+ V
Sbjct: 357 SGQSLVSFCLASKTLVKEANKNDGNDQSV 385


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 114 ARVRVSNIVRFEPREL 67
           AR+ V+NI +FE REL
Sbjct: 794 ARIGVANIRQFEEREL 809


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -2

Query: 405 TREPSHMWPPVTTFPILRTEWKAVDGRPKH 316
           T  PS +WPP        TE   +DG   H
Sbjct: 100 TLAPS-LWPPAERISFCYTERMGLDGSTGH 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,124
Number of Sequences: 2352
Number of extensions: 10619
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)