Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0104
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.0  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   9.3  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   9.3  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   9.3  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -3

Query: 563 GDRTVAKSALQRAGAVTSRGYIQRVFFVSLTDNKLHSVGIYLRDDSHRHYP 411
           GDRT    A+   G +TS   I +VF + +  N LH+   YL    H   P
Sbjct: 609 GDRT---DAINYRG-ITSLCAIAKVFELVIYKNLLHACRSYLSPYQHGFVP 655


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 123 STCEVQASVYLQTK 164
           +TCE++  VYLQ K
Sbjct: 88  TTCELEEEVYLQPK 101


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 561 GPHGCEEC 538
           GPHGC+ C
Sbjct: 437 GPHGCQPC 444


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 511 DVTAPARCKALFATVRSP 564
           ++  PAR K+++ T+R P
Sbjct: 148 ELKPPARVKSVYVTIRDP 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,430
Number of Sequences: 2352
Number of extensions: 10325
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)