Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0101
         (539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   5.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   5.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   5.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.9  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 418 TILYKPIIHIINVNCTL 468
           T  Y  II +IN+NC L
Sbjct: 159 TTAYLHIITMINMNCAL 175


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 418 TILYKPIIHIINVNCTL 468
           T  Y  II +IN+NC L
Sbjct: 159 TTAYLHIITMINMNCAL 175


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 418 TILYKPIIHIINVNCTL 468
           T  Y  II +IN+NC L
Sbjct: 159 TTAYLHIITMINMNCAL 175


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 159 RSYCERNKTHFKINNRKTTVDCN 91
           R  C +NK   K  N +   +CN
Sbjct: 485 RQQCNQNKCPVKRGNGRCDEECN 507


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,132
Number of Sequences: 336
Number of extensions: 1950
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)