Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0100
         (601 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435...    79   3e-15
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549...    38   0.008
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665...    37   0.011
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276     36   0.019
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717...    33   0.13 
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380...    33   0.17 
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943...    32   0.31 
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227...    31   0.93 
05_01_0290 + 2270749-2271037,2272227-2272363,2272660-2272805,227...    30   1.2  
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728...    29   2.2  
07_03_1316 + 25736931-25737206,25737276-25737329,25738036-257381...    29   2.2  
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     29   2.2  
03_05_0066 - 20455976-20456161,20456251-20456347,20456608-204567...    29   2.8  
05_04_0383 - 20801036-20801309,20801413-20801538,20801706-208017...    28   5.0  
02_05_0796 + 31800256-31800528,31800635-31800758,31802642-318027...    28   5.0  
11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677         28   6.6  
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116...    28   6.6  
12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055         27   8.7  
03_02_0967 + 12786219-12786305,12786716-12786781,12786897-127869...    27   8.7  

>10_08_0985 -
           22042801-22042963,22043019-22043138,22043261-22043562,
           22044055-22044351,22044448-22044556,22044826-22045358,
           22045446-22045644,22045741-22045865,22045937-22046020,
           22046093-22046221,22046337-22046465,22046593-22046739,
           22047106-22047346,22047859-22047980
          Length = 899

 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 40/84 (47%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +3

Query: 255 KLQSVINKIFSKFGKIVNE--YYPTT-ENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDK 425
           KL++VI KI+S+ G I     + P   E   T GY F+EY+ PQ A  A + TN  KLDK
Sbjct: 78  KLENVIRKIYSQIGAIKEGGLWMPVNPETKKTYGYCFIEYNTPQEAELAREKTNGYKLDK 137

Query: 426 QHTFLVNLFTDFQKYSDIPKEWEP 497
            H F VN+F DF KY  +P EW P
Sbjct: 138 SHIFAVNMFDDFDKYMKVPDEWMP 161



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 196 GYENVVVVDGCPQVGPERLE 255
           G+ NVVVVD  P V PE+ E
Sbjct: 58  GFANVVVVDNLPVVPPEKFE 77


>06_03_0614 -
           22753092-22753349,22754059-22754277,22754712-22754960,
           22755186-22755275,22755379-22755456,22755562-22756337,
           22757042-22757384
          Length = 670

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +3

Query: 276 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLF 452
           ++FS FG I++    T  NG + GY F+++ +  +A +A+   N    + Q  F V LF
Sbjct: 167 EMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNGMLANGQKIF-VGLF 224



 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/71 (21%), Positives = 31/71 (43%)
 Frame = +3

Query: 282 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDF 461
           FS FG I +       NGL+  + F+ +   + A  AVK  N   +     ++       
Sbjct: 260 FSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKS 319

Query: 462 QKYSDIPKEWE 494
           ++ +++  ++E
Sbjct: 320 ERQAELKAKFE 330


>08_02_0162 +
           13464698-13464974,13465719-13465837,13465920-13466579,
           13466686-13466763,13466849-13466938,13467241-13467378,
           13467730-13467738
          Length = 456

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 18/75 (24%), Positives = 38/75 (50%)
 Frame = +3

Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
           + +IF KFG I +       +G +  + F+ + NP +AA AV+  N  K D +  ++   
Sbjct: 234 LKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRA 293

Query: 450 FTDFQKYSDIPKEWE 494
               ++  ++ +++E
Sbjct: 294 QKKSEREMELKEKFE 308



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 279 IFSKFGKIVNEYYPTTENG-LTTGYIFLEYSNPQNAAEAVKATN 407
           +FS+ G +V+       N  L+ GY ++ +S+P +AA A++  N
Sbjct: 58  VFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEMLN 101



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = +3

Query: 282 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 440
           FS FG I++    T  +G + GY F+++   + A  A+   N   L+ +  ++
Sbjct: 147 FSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV 199


>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
          Length = 924

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 279 IFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
           +F  FG++ N         GL+ GY F++YS+P +AAEAV   N   +D
Sbjct: 323 LFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVD 371



 Score = 35.9 bits (79), Expect = 0.025
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +3

Query: 276 KIFSKFGKIV-NEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
           ++F  FG+IV +        GL+ GY F++YS+P+ A+EA+K  N
Sbjct: 227 ELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRMN 271


>04_04_0435 -
           25170348-25170593,25170989-25171189,25171580-25171756,
           25172284-25172418,25173131-25173262,25173292-25173369,
           25173452-25174108,25174210-25174328,25175897-25176173
          Length = 673

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = +3

Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 440
           ++  FS FG I++    T E G + G+ F++Y   + A  A+K+ N   ++ +  ++
Sbjct: 143 LHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYV 199



 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 276 KIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAV 395
           ++FS +GKI +       NG++ G  F+ +S  + A++A+
Sbjct: 339 ELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQAL 378


>10_08_0254 +
           16236689-16236793,16237760-16237808,16237988-16238076,
           16238178-16238234,16238684-16238746,16238828-16238893,
           16239520-16239606,16239691-16239784,16240351-16240673,
           16241022-16241048,16241065-16241145,16241445-16241476,
           16242126-16242266,16242455-16242516,16243170-16243387
          Length = 497

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 261 QSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
           + ++ ++F + G +VN Y P      L  GY F+E+ + ++A  A+K  N  KL
Sbjct: 38  EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILNMIKL 91


>03_02_0555 +
           9431451-9431688,9432685-9432803,9432886-9433079,
           9433174-9433430,9433544-9433650,9433715-9433888,
           9434359-9434490,9434776-9434955,9435062-9435265
          Length = 534

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 13/47 (27%), Positives = 29/47 (61%)
 Frame = +3

Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNN 410
           + ++F KFG I++      E+G + GY F++++  ++A  +++  NN
Sbjct: 130 LQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNN 176


>04_03_0812 -
           19922208-19922357,19922448-19922564,19922681-19922752,
           19922864-19923993,19924939-19925008,19925125-19925199
          Length = 537

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNN 410
           K G +V ++    +NGL  G  +L+Y  PQ+AA   K  +N
Sbjct: 86  KDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDN 126


>05_01_0290 +
           2270749-2271037,2272227-2272363,2272660-2272805,
           2272853-2272877
          Length = 198

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 270 INKIFSKFGKIVNEYYPTTEN-GLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
           ++ IF  FG++ N +       G   GY  +EY   + A  A+KA +  +L
Sbjct: 117 LHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTEL 167


>10_08_0747 - 20272157-20272456,20272538-20272664,20272770-20272843,
            20272928-20272971,20273697-20276223
          Length = 1023

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
 Frame = +3

Query: 261  QSVINKIFSKFGKIVNE----YYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
            +S I K+FS FGKI+ E    +    + G   GY F++Y+  + A  A +  N
Sbjct: 882  ESDIIKMFSPFGKIIAEDFLWHTRGPKRGEPRGYAFVQYTTKEEAQLAKEKMN 934


>07_03_1316 +
           25736931-25737206,25737276-25737329,25738036-25738189,
           25740235-25740313,25740413-25740492,25740588-25740654,
           25741548-25741619,25742071-25742223,25742309-25742392,
           25742811-25742877
          Length = 361

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 270 INKIFSKFGKIVNEYYP-TTENGLTTGYIFLEYSNPQNAAEAV 395
           ++ +F K+G++V+ Y P     G + G+ F+ Y     A +AV
Sbjct: 168 LSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAV 210


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 279 IFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
           +FS+FG+IV  +       G + GY F++YS+   A  A+ A N   L+
Sbjct: 326 LFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIAAMNGYHLE 374


>03_05_0066 -
           20455976-20456161,20456251-20456347,20456608-20456738,
           20456814-20456869,20457498-20457543
          Length = 171

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +3

Query: 267 VINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQ 428
           V+ + FS +G++V    P    G   G  F++YSN  +A EA++  N  +L  Q
Sbjct: 48  VLKQAFSPYGELVYVKIPV---GKRCG--FVQYSNRASAEEAIRMLNGSQLGGQ 96


>05_04_0383 -
           20801036-20801309,20801413-20801538,20801706-20801730,
           20801808-20802259,20802330-20802394,20802487-20802711,
           20804750-20804878,20805095-20805306,20806861-20806894
          Length = 513

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 261 QSVINKIFSKFGKIVNEYYPTT-ENGLTTGYIFLEYSNPQNAAEAVK 398
           + V+ +I  + G++V+ + P   E   + GY F EY   + A  AVK
Sbjct: 20  ERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQYAVK 66


>02_05_0796 +
           31800256-31800528,31800635-31800758,31802642-31802771,
           31804336-31804414,31804848-31805133,31805273-31805385
          Length = 334

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 282 FSKFGKIVNEYYPTT-ENGLTTGYIFLEYSNPQNAAEAVKATN 407
           F ++G+I+     T  E   + GY F+ +  P++A EAV+  N
Sbjct: 66  FQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRNPN 108


>11_01_0002 + 3386-3541,3619-3717,4114-4182,4275-4459,4662-4677
          Length = 174

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
           I ++FS+ G +        ++G + G   + +S   +A  AVK  NN +LD
Sbjct: 84  IKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKRYNNVQLD 134


>09_01_0079 -
           1159963-1160211,1160303-1160509,1160631-1160801,
           1161732-1161869,1162184-1162273,1162354-1162431,
           1162510-1163166,1163245-1163363,1164305-1164584
          Length = 662

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = +3

Query: 282 FSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 440
           F  FG I++    T  +G + GY F++Y   + A  A+   N   ++ +  ++
Sbjct: 148 FCVFGNILSCKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYV 200


>12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055
          Length = 178

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
           I ++FS+ G +         +G + G   + +S   +A  AVK  NN +LD
Sbjct: 88  IKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVKRYNNVQLD 138


>03_02_0967 +
           12786219-12786305,12786716-12786781,12786897-12786971,
           12787054-12787162,12787253-12787299,12787396-12787453,
           12788193-12788242,12788459-12788504,12788758-12788808,
           12789376-12789478,12789923-12789956,12790210-12790224
          Length = 246

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +3

Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
           +  +F K+G+IV+            GY F+E+ +P++A EA    +    D
Sbjct: 23  VEDLFYKYGRIVDIDLKIPPR--PPGYAFVEFEDPRDAEEACAGRDGYNFD 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,951,115
Number of Sequences: 37544
Number of extensions: 318560
Number of successful extensions: 728
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)