Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0100
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.61 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.5  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    24   3.3  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    24   3.3  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   3.3  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   3.3  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    24   4.3  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    24   4.3  

>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 435 FLVNLFTDFQKYSDIPKEWEPPAPHHSRC 521
           F V L T    YS+   EW+PPA + S C
Sbjct: 124 FEVTLATKATIYSEGLVEWKPPAIYKSSC 152


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 441 VNLFTDFQKYSDIPKEWEPPAPHHSRCS 524
           V L T    Y++    W+PPA + S CS
Sbjct: 126 VTLMTKATVYNNGMVIWQPPAVYKSSCS 153


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 409 LFVAFTASAAFCGLLYSRKMYPVVSPFSV 323
           +F AFTAS  +CG  +  +  PV + F +
Sbjct: 426 VFAAFTASYFWCGQGWELEDNPVSTAFEI 454


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +3

Query: 453 TDFQKYSDIPKEWEPPAPHHSRCSQICNGI*WDPDAYDQFLVGIWDW 593
           T+   YS+    W PP  +H+ C    N   W P  Y + +V I  W
Sbjct: 140 TNVLVYSEGKVLWVPPTEYHAFCE--LNMRLW-PFDYQKCIVKIGSW 183


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 579 QQGTGHMHQDPIKYHCRSDCTLNGEVPVAPILL 481
           QQ   H H     +H  ++ T  G V V+P+++
Sbjct: 646 QQEDDHHHHQQHHHHHHAEVTTAGSVRVSPLVV 678


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 445 FTKNVCCLSNLQLFVAFTASAAFCGLLYSRK 353
           F+ ++CC  ++   VAFT    F  +LY  K
Sbjct: 197 FSSSLCCFLSVWFVVAFTVE-RFIAVLYPLK 226


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/36 (22%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +3

Query: 438 LVNLFTDF-QKYSDIPKEWEPPAPHHSRCSQICNGI 542
           +  L+ D+  +Y  + + W+P   +H R  +   G+
Sbjct: 94  ITRLYYDYPDQYRALRERWDPSGEYHRRFEEYLRGL 129


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/36 (22%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +3

Query: 438 LVNLFTDF-QKYSDIPKEWEPPAPHHSRCSQICNGI 542
           +  L+ D+  +Y  + + W+P   +H R  +   G+
Sbjct: 94  ITRLYYDYPDQYRALRERWDPSGEYHRRFEEYLRGL 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,622
Number of Sequences: 2352
Number of extensions: 12321
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)