Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0100
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation in... 112 1e-24
U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein. 112 1e-24
BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation ... 112 1e-24
BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for IM... 112 1e-24
BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein. 112 1e-24
AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein. 112 1e-24
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 36 0.14
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 36 0.14
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 36 0.14
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 36 0.14
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 36 0.14
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 36 0.14
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 36 0.14
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 36 0.14
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 36 0.14
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 36 0.14
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 36 0.14
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 36 0.14
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 35 0.19
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 35 0.19
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 35 0.19
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 35 0.19
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 35 0.19
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 35 0.19
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 35 0.19
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 34 0.33
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 34 0.33
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 34 0.33
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 34 0.33
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 34 0.33
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 34 0.44
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 34 0.44
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 34 0.44
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 33 0.58
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 33 0.58
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 33 0.58
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 33 0.58
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 33 0.58
BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementatio... 32 1.8
BC054873-1|AAH54873.1| 122|Homo sapiens ACF protein protein. 32 1.8
AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation... 32 1.8
AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation... 32 1.8
AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation... 32 1.8
AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation... 32 1.8
AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation... 32 1.8
AL512366-2|CAI14234.1| 201|Homo sapiens APOBEC1 complementation... 32 1.8
AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation... 32 1.8
AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating pr... 32 1.8
AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating pr... 32 1.8
AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementatio... 32 1.8
AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementatio... 32 1.8
AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementatio... 32 1.8
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 31 2.3
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 31 2.3
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 31 2.3
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 31 2.3
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 31 2.3
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 31 2.3
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 31 2.3
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 31 2.3
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 31 2.3
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 31 2.3
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 31 2.3
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 31 2.3
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 31 2.3
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 31 2.3
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 31 2.3
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 31 3.1
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 31 3.1
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 31 3.1
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 31 3.1
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 31 3.1
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 31 3.1
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 31 3.1
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 31 3.1
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 31 4.1
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 31 4.1
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 31 4.1
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 31 4.1
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 31 4.1
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 31 4.1
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF488804-1|AAO15766.1| 1911|Homo sapiens a disintegrin-like and ... 30 5.4
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 30 7.1
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 30 7.1
BC105018-1|AAI05019.1| 306|Homo sapiens RNA binding protein, au... 30 7.1
BC103753-1|AAI03754.1| 307|Homo sapiens RNA binding protein, au... 30 7.1
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 30 7.1
AL031668-5|CAI22150.1| 306|Homo sapiens RNA binding protein, au... 30 7.1
AL031668-2|CAI22147.1| 181|Homo sapiens RNA binding protein, au... 30 7.1
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 30 7.1
AK222915-1|BAD96635.1| 307|Homo sapiens RNA binding protein (au... 30 7.1
AF148457-1|AAF04487.1| 306|Homo sapiens heterogeneous nuclear r... 30 7.1
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 30 7.1
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 29 9.4
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 29 9.4
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 29 9.4
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 29 9.4
>U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation
initiation factor protein.
Length = 814
Score = 112 bits (269), Expect = 1e-24
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +3
Query: 255 KLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHT 434
KL++VI+KIFSKFGKI N++YP E+G T GYIFLEY++P +A +AVK + KLDKQHT
Sbjct: 202 KLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHT 260
Query: 435 FLVNLFTDFQKYSDIPKEWEPP 500
F VNLFTDF KY I EW+ P
Sbjct: 261 FRVNLFTDFDKYMTISDEWDIP 282
Score = 51.6 bits (118), Expect = 2e-06
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +1
Query: 154 LLADILEQKPKESDGYENVVVVDGCPQVGPERLENYR 264
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLE +
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLK 204
>U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein.
Length = 873
Score = 112 bits (269), Expect = 1e-24
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +3
Query: 255 KLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHT 434
KL++VI+KIFSKFGKI N++YP E+G T GYIFLEY++P +A +AVK + KLDKQHT
Sbjct: 202 KLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHT 260
Query: 435 FLVNLFTDFQKYSDIPKEWEPP 500
F VNLFTDF KY I EW+ P
Sbjct: 261 FRVNLFTDFDKYMTISDEWDIP 282
Score = 51.6 bits (118), Expect = 2e-06
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +1
Query: 154 LLADILEQKPKESDGYENVVVVDGCPQVGPERLENYR 264
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLE +
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLK 204
>BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation
initiation factor 3, subunit B protein.
Length = 814
Score = 112 bits (269), Expect = 1e-24
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +3
Query: 255 KLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHT 434
KL++VI+KIFSKFGKI N++YP E+G T GYIFLEY++P +A +AVK + KLDKQHT
Sbjct: 202 KLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHT 260
Query: 435 FLVNLFTDFQKYSDIPKEWEPP 500
F VNLFTDF KY I EW+ P
Sbjct: 261 FRVNLFTDFDKYMTISDEWDIP 282
Score = 51.6 bits (118), Expect = 2e-06
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +1
Query: 154 LLADILEQKPKESDGYENVVVVDGCPQVGPERLENYR 264
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLE +
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLK 204
>BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for
IMAGE:4124553) protein.
Length = 622
Score = 112 bits (269), Expect = 1e-24
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +3
Query: 255 KLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHT 434
KL++VI+KIFSKFGKI N++YP E+G T GYIFLEY++P +A +AVK + KLDKQHT
Sbjct: 11 KLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHT 69
Query: 435 FLVNLFTDFQKYSDIPKEWEPP 500
F VNLFTDF KY I EW+ P
Sbjct: 70 FRVNLFTDFDKYMTISDEWDIP 91
>BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein.
Length = 814
Score = 112 bits (269), Expect = 1e-24
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +3
Query: 255 KLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHT 434
KL++VI+KIFSKFGKI N++YP E+G T GYIFLEY++P +A +AVK + KLDKQHT
Sbjct: 202 KLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHT 260
Query: 435 FLVNLFTDFQKYSDIPKEWEPP 500
F VNLFTDF KY I EW+ P
Sbjct: 261 FRVNLFTDFDKYMTISDEWDIP 282
Score = 51.6 bits (118), Expect = 2e-06
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +1
Query: 154 LLADILEQKPKESDGYENVVVVDGCPQVGPERLENYR 264
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLE +
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLK 204
>AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein.
Length = 385
Score = 112 bits (269), Expect = 1e-24
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +3
Query: 255 KLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHT 434
KL++VI+KIFSKFGKI N++YP E+G T GYIFLEY++P +A +AVK + KLDKQHT
Sbjct: 202 KLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHT 260
Query: 435 FLVNLFTDFQKYSDIPKEWEPP 500
F VNLFTDF KY I EW+ P
Sbjct: 261 FRVNLFTDFDKYMTISDEWDIP 282
Score = 51.6 bits (118), Expect = 2e-06
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +1
Query: 154 LLADILEQKPKESDGYENVVVVDGCPQVGPERLENYR 264
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLE +
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLK 204
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 18 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 77
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 78 QKKVERQAELKRKFE 92
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 121 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 165
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 310 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.19
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 443
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 444 NLFTDFQKYSDIPKEWEPP 500
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.19
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 443
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 444 NLFTDFQKYSDIPKEWEPP 500
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.19
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 443
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 444 NLFTDFQKYSDIPKEWEPP 500
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.19
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 443
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 444 NLFTDFQKYSDIPKEWEPP 500
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.19
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 443
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 154 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 213
Query: 444 NLFTDFQKYSDIPKEWEPP 500
+ + + P+ + PP
Sbjct: 214 AVLAPWPR--PPPRRFSPP 230
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 35.1 bits (77), Expect = 0.19
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 443
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 100 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 159
Query: 444 NLFTDFQKYSDIPKEWEPP 500
+ + + P+ + PP
Sbjct: 160 AVLAPWPR--PPPRRFSPP 176
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.19
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 443
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 444 NLFTDFQKYSDIPKEWEPP 500
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.33
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 182 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 241
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 242 QKKVERQTELKRKFE 256
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.33
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.33
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.33
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.33
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 33.9 bits (74), Expect = 0.44
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 231 AGRPRAS*KLQSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATN 407
+G PR Q + +FS+FG+I+N + GL+ G F+ + A EA+ + N
Sbjct: 111 SGLPRTM--TQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFN 168
Query: 408 NCK 416
K
Sbjct: 169 GHK 171
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 33.9 bits (74), Expect = 0.44
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 231 AGRPRAS*KLQSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATN 407
+G PR Q + +FS+FG+I+N + GL+ G F+ + A EA+ + N
Sbjct: 111 SGLPRTM--TQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFN 168
Query: 408 NCK 416
K
Sbjct: 169 GHK 171
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 33.9 bits (74), Expect = 0.44
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 231 AGRPRAS*KLQSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATN 407
+G PR Q + +FS+FG+I+N + GL+ G F+ + A EA+ + N
Sbjct: 111 SGLPRTM--TQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFN 168
Query: 408 NCK 416
K
Sbjct: 169 GHK 171
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 33.5 bits (73), Expect = 0.58
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.58
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.58
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.58
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.58
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 449
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 450 FTDFQKYSDIPKEWE 494
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>BC054873-1|AAH54873.1| 122|Homo sapiens ACF protein protein.
Length = 122
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 86 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 129
>AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL512366-2|CAI14234.1| 201|Homo sapiens APOBEC1 complementation
factor protein.
Length = 201
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 86 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 129
>AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 586
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 594
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementation
factor related protein protein.
Length = 569
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 61 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 104
>AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 288 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 270 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 431
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 224 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 278
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 31.5 bits (68), Expect = 2.3
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 318 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 515 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 549
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 270 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 431
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 242 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 296
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 270 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 431
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 199 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 253
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 270 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 431
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 199 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 253
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 270 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 431
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 182 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 236
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 270 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 431
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 225 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 279
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 31.5 bits (68), Expect = 2.3
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 318 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 287 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 321
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 31.5 bits (68), Expect = 2.3
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 318 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 287 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 321
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 31.5 bits (68), Expect = 2.3
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 318 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 287 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 321
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 31.5 bits (68), Expect = 2.3
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 318 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 408 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 442
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 270 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 431
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 225 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 279
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 270 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 431
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 239 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 293
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 270 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 431
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 242 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 296
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 31.5 bits (68), Expect = 2.3
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 318 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 515 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 549
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVN 446
+ ++F K+G++ + Y P + G+ F+ + + ++A +A+ A + LD +
Sbjct: 30 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR-----E 84
Query: 447 LFTDFQKYSDIPKEWEPPAPHHSR 518
L +Y PP HHSR
Sbjct: 85 LRVQMARYG------RPPDSHHSR 102
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVN 446
+ ++F K+G++ + Y P + G+ F+ + + ++A +A+ A + LD +
Sbjct: 30 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR-----E 84
Query: 447 LFTDFQKYSDIPKEWEPPAPHHSR 518
L +Y PP HHSR
Sbjct: 85 LRVQMARYG------RPPDSHHSR 102
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVN 446
+ ++F K+G++ + Y P + G+ F+ + + ++A +A+ A + LD +
Sbjct: 30 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR-----E 84
Query: 447 LFTDFQKYSDIPKEWEPPAPHHSR 518
L +Y PP HHSR
Sbjct: 85 LRVQMARYG------RPPDSHHSR 102
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVN 446
+ ++F K+G++ + Y P + G+ F+ + + ++A +A+ A + LD +
Sbjct: 30 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR-----E 84
Query: 447 LFTDFQKYSDIPKEWEPPAPHHSR 518
L +Y PP HHSR
Sbjct: 85 LRVQMARYG------RPPDSHHSR 102
>BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein.
Length = 269
Score = 31.1 bits (67), Expect = 3.1
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I+N E G + + F+ +S+P+ A+AV A N
Sbjct: 130 LQKEFSPFG-IINSANVMMEGGCSKRFGFVCFSSPEEVAKAVTAMN 174
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVN 446
+ ++F K+G++ + Y P + G+ F+ + + ++A +A+ A + LD +
Sbjct: 30 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR-----E 84
Query: 447 LFTDFQKYSDIPKEWEPPAPHHSR 518
L +Y PP HHSR
Sbjct: 85 LRVQMARYG------RPPDSHHSR 102
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVN 446
+ ++F K+G++ + Y P + G+ F+ + + ++A +A+ A + LD +
Sbjct: 30 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR-----E 84
Query: 447 LFTDFQKYSDIPKEWEPPAPHHSR 518
L +Y PP HHSR
Sbjct: 85 LRVQMARYG------RPPDSHHSR 102
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVN 446
+ ++F K+G++ + Y P + G+ F+ + + ++A +A+ A + LD +
Sbjct: 30 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR-----E 84
Query: 447 LFTDFQKYSDIPKEWEPPAPHHSR 518
L +Y PP HHSR
Sbjct: 85 LRVQMARYG------RPPDSHHSR 102
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 318 PTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
P +NG + GY F+E+++ ++A EA+ + N
Sbjct: 492 PQNQNGKSKGYAFIEFASFEDAKEALNSCN 521
>AF488804-1|AAO15766.1| 1911|Homo sapiens a disintegrin-like and
metalloprotease with thrombospondin type 1 motifs 20
protein.
Length = 1911
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Frame = +3
Query: 357 LEYSNPQNAAEAVKATN--NCKLDKQHTFLVNLFTDFQKYS-DIPKE-------WEPPAP 506
+EYS NA E + +TN +L Q + NL+ YS +IP E W+P P
Sbjct: 796 IEYSGSNNAVERINSTNRQEKELILQVLCVGNLYNPDVHYSFNIPLEERSDMFTWDPYGP 855
Query: 507 HHSRCSQICNGI 542
C+++C G+
Sbjct: 856 WEG-CTKMCQGL 866
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 60 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 104
>BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein.
Length = 281
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 60 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 104
>BC105018-1|AAI05019.1| 306|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 306
Score = 29.9 bits (64), Expect = 7.1
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 261 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 440
+S + IFSK+G++ + GY F++YSN ++A AV N L Q T
Sbjct: 35 KSDVETIFSKYGRVAG-------CSVHKGYAFVQYSNERHARAAVLGENGRVLAGQ-TLD 86
Query: 441 VNLFTDFQKYSDIPKEWEPPAPHHSRCSQICNGI*WDPDAY-DQFLVGIWDW 593
+N+ + PK P + S I +G +D D Y D F ++D+
Sbjct: 87 INMAGE-------PKPDRPKGLKRA-ASAIYSGYIFDYDYYRDDFYDRLFDY 130
>BC103753-1|AAI03754.1| 307|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 307
Score = 29.9 bits (64), Expect = 7.1
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 261 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 440
+S + IFSK+G++ + GY F++YSN ++A AV N L Q T
Sbjct: 35 KSDVETIFSKYGRVAG-------CSVHKGYAFVQYSNERHARAAVLGENGRVLAGQ-TLD 86
Query: 441 VNLFTDFQKYSDIPKEWEPPAPHHSRCSQICNGI*WDPDAY-DQFLVGIWDW 593
+N+ + PK P + S I +G +D D Y D F ++D+
Sbjct: 87 INMAGE-------PKPDRPKGLKRA-ASAIYSGYIFDYDYYRDDFYDRLFDY 130
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 89 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 133
>AL031668-5|CAI22150.1| 306|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 306
Score = 29.9 bits (64), Expect = 7.1
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 261 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 440
+S + IFSK+G++ + GY F++YSN ++A AV N L Q T
Sbjct: 35 KSDVETIFSKYGRVAG-------CSVHKGYAFVQYSNERHARAAVLGENGRVLAGQ-TLD 86
Query: 441 VNLFTDFQKYSDIPKEWEPPAPHHSRCSQICNGI*WDPDAY-DQFLVGIWDW 593
+N+ + PK P + S I +G +D D Y D F ++D+
Sbjct: 87 INMAGE-------PKPDRPKGLKRA-ASAIYSGYIFDYDYYRDDFYDRLFDY 130
>AL031668-2|CAI22147.1| 181|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 181
Score = 29.9 bits (64), Expect = 7.1
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 261 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 440
+S + IFSK+G++ + GY F++YSN ++A AV N L Q T
Sbjct: 35 KSDVETIFSKYGRVAG-------CSVHKGYAFVQYSNERHARAAVLGENGRVLAGQ-TLD 86
Query: 441 VNLFTDFQKYSDIPKEWEPPAPHHSRCSQICNGI*WDPDAY-DQFLVGIWDW 593
+N+ + PK P + S I +G +D D Y D F ++D+
Sbjct: 87 INMAGE-------PKPDRPKGLKRA-ASAIYSGYIFDYDYYRDDFYDRLFDY 130
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 21 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 65
>AK222915-1|BAD96635.1| 307|Homo sapiens RNA binding protein
(autoantigenic, hnRNP-associated with lethal yellow)
long i protein.
Length = 307
Score = 29.9 bits (64), Expect = 7.1
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 261 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 440
+S + IFSK+G++ + GY F++YSN ++A AV N L Q T
Sbjct: 35 KSDVETIFSKYGRVAG-------CSVHKGYAFVQYSNERHARAAVLGENGRVLAGQ-TLD 86
Query: 441 VNLFTDFQKYSDIPKEWEPPAPHHSRCSQICNGI*WDPDAY-DQFLVGIWDW 593
+N+ + PK P + S I +G +D D Y D F ++D+
Sbjct: 87 INMAGE-------PKPDRPKGLKRA-ASAIYSGYIFDYDYYRDDFYDRLFDY 130
>AF148457-1|AAF04487.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein, alternate transcript protein.
Length = 306
Score = 29.9 bits (64), Expect = 7.1
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 261 QSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFL 440
+S + IFSK+G++ + GY F++YSN ++A AV N L Q T
Sbjct: 35 KSDVETIFSKYGRVAG-------CSVHKGYAFVQYSNERHARAAVLGENGRVLAGQ-TLD 86
Query: 441 VNLFTDFQKYSDIPKEWEPPAPHHSRCSQICNGI*WDPDAY-DQFLVGIWDW 593
+N+ + PK P + S I +G +D D Y D F ++D+
Sbjct: 87 INMAGE-------PKPDRPKGLKRA-ASAIYSGYIFDYDYYRDDFYDRLFDY 130
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 407
+ K FS FG I + E+G + G+ F+ +S+P+ A +AV N
Sbjct: 8 LRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 52
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 333 GLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
G + GY F+ YS+P +A +A+ N KL
Sbjct: 68 GQSLGYGFVNYSDPNDADKAINTLNGLKL 96
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 333 GLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
G + GY F+ YS+P +A +A+ N KL
Sbjct: 77 GQSLGYGFVNYSDPNDADKAINTLNGLKL 105
>AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein.
Length = 318
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 333 GLTTGYIFLEYSNPQNAAEAVKATNNCKL 419
G + GY F+ YS+P +A +A+ N KL
Sbjct: 28 GQSLGYGFVNYSDPNDADKAINTLNGLKL 56
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 INKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 422
+ ++F K+G++ + Y P + G+ F+ + + ++A +A+ A + LD
Sbjct: 30 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLD 81
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,358,365
Number of Sequences: 237096
Number of extensions: 1821870
Number of successful extensions: 4002
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 3822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3983
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -