Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0097
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    30   0.018
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   0.52 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    24   0.90 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.90 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.4  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 0.018
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +3

Query: 84  DINECSE---NNGGCEQKCLNTPGNFSCACNLGFE 179
           +INEC      NGG    CL+  G++SC C  GF+
Sbjct: 184 EINECDSAPCQNGGT---CLDLIGSYSCKCPKGFQ 215



 Score = 27.5 bits (58), Expect = 0.097
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = +3

Query: 84  DINECSEN---NGGCEQKCLNTPGNFSCACNLGF 176
           DINEC  N   N G    C+    ++ C C LGF
Sbjct: 298 DINECLSNPCSNAGTLD-CVQLVNDYHCNCKLGF 330



 Score = 25.0 bits (52), Expect = 0.52
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +3

Query: 81  LDINECSENNGGCEQK--CLNTPGNFSCACNLGF 176
           +++++C    G C     CL+  G F C C  GF
Sbjct: 259 INVDDCRP--GACHNNGTCLDKVGGFECKCPPGF 290



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +3

Query: 6   GSKIQDYVGAPCLKLEVMGCARLDC-LDINECSEN---NGGCEQKCLNTPGNFSCACNLG 173
           G    D +G+   K    G    +C L++++C  N   NGG    C +   +FSC+C  G
Sbjct: 196 GGTCLDLIGSYSCKCP-KGFQGQNCELNVDDCKPNPCQNGGT---CHDLVNSFSCSCPSG 251



 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +3

Query: 75  DCLD-INECSENNGGCEQKCLNTPGNFSCACNLGF 176
           DC + ++ CS N    +  C+     + C C +G+
Sbjct: 95  DCGEYVDWCSTNPCENQATCVQNKNQYQCLCGVGW 129


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 368 CDFGYVMSGFSTLQCTLSGT-WNGTAPE 448
           CD+ Y + G  T  CT   T WNGTA E
Sbjct: 99  CDWLYGIFGHET-SCTRYWTCWNGTATE 125


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 278 VMCPPLAPPENGQLLSTKKS 337
           V+CP    PE   L+STK+S
Sbjct: 11  VLCPECENPETELLVSTKRS 30


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 24.2 bits (50), Expect = 0.90
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +3

Query: 84  DINECSEN---NGGCEQKCLNTPGNFSCACNLGFE 179
           +IN+C  N   NGG    C++    F C C  G+E
Sbjct: 68  NINDCKVNPCENGGT---CVDKINAFQCICKEGWE 99



 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +3

Query: 81  LDINECSENNGGCEQKCLNTPGNFSCACNLGFE 179
           ++ ++CS N       C++   +F C C  G++
Sbjct: 105 INTDDCSPNPCRNNGSCVDRIADFECNCKNGWK 137


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -2

Query: 312 PFSGGASGGHMTGTQDLFLYMYLRLFHRFQIVQLRNLLFHWKNIIQIQDY 163
           PF G           ++F YM+ ++  RF I +L N L   K ++++ ++
Sbjct: 215 PFEGAREIVDKNRRGEIFYYMHQQIIARFNIERLCNGL---KRVVKLSNW 261


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 275 VRKIYSFICISVSF 234
           +R+IY F C+S++F
Sbjct: 53  LRRIYYFYCVSITF 66


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +3

Query: 522 KWFSTIQRQCYQSP 563
           +W+ T+ + CY  P
Sbjct: 64  EWYHTLSKACYDCP 77


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +1

Query: 382  CNVR-IFDITMHFKWNLEWNCS*MSICSMC 468
            C+ R  F   +   WN+  NC  + +C  C
Sbjct: 1111 CSNRCFFPSKIRICWNVLLNCVYLFLCGFC 1140


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 393 PDITYPKSHW 364
           P ITYP S W
Sbjct: 43  PPITYPPSDW 52


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 260 NKSCVPVMCPPLAPPENGQL 319
           N  C  + CP +  P+N +L
Sbjct: 702 NNKCFTMECPQVTCPDNMKL 721


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 393 PDITYPKSHW 364
           P ITYP S W
Sbjct: 34  PPITYPPSDW 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,847
Number of Sequences: 336
Number of extensions: 3826
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)