Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0097
         (625 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    42   2e-05
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    25   1.5  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    25   2.6  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       24   3.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   4.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.9  

>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 41.5 bits (93), Expect = 2e-05
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 96  CSENNGGCEQKCLNTPGNFSCACNLGFELYSSNGTA-GFSIELS 224
           C+  NGGC   CL  P ++SCAC +G +L  +  T   + ++LS
Sbjct: 4   CAHKNGGCSYICLLNPTSYSCACPIGIQLKDNGKTCKSWPLQLS 47


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
 Frame = -2

Query: 330 FVDKSCPFSGGAS--GGHMTGTQD---LFLYM---YLRLFHRFQIVQLRN 205
           ++DK CPF+G  S  G  +TG      + LY+   YL+   ++   + RN
Sbjct: 50  YIDKKCPFTGHISIRGRILTGVVRKCIVLLYIRRDYLQFIRKYDTFEKRN 99


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 231 GERDGDTYKGINLAYRSCAPHLHHLKTDNFYRQKNLITSVIQ 356
           GE  G +Y+G     R+CA  +HH   +    ++N   +V+Q
Sbjct: 15  GEVTGVSYRGQAQTCRNCAAPVHH-GLNCVQNRQNRFANVVQ 55


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
 Frame = +3

Query: 177 ELYSSNGTAGFSIELSETGERDGD------TYKGINLAYRSCAPHLHHLKTD 314
           +LY SN      +E++ETG   G          G ++ +R+ AP L  ++ D
Sbjct: 528 QLYVSNAVHQVDLEVNETGTEGGAATIVTLNRSGTSVVFRAEAPFLLLIRND 579


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = -2

Query: 300  GASGGHMTGTQDLFLYMYLRLFHRFQIVQLRNLLFHWKNIIQIQDYTRMKSCRVCLSTSA 121
            G  G  +T  ++  LY  + L H  ++     +   W+ + Q+ + TR K   VC S+  
Sbjct: 1573 GMPGSSVTAAKERCLYEAV-LKHNHRLAHNVRM---WRTVRQLLERTRQKRMAVCPSSVV 1628

Query: 120  HTLRCFR 100
                 F+
Sbjct: 1629 LAREAFK 1635


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 606  KDVKVFVRCLPSTRQVIGNIVSVWC 532
            K +K  V+C+    + IGNIV V C
Sbjct: 969  KGLKHVVQCVIVAVKTIGNIVLVTC 993


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,777
Number of Sequences: 2352
Number of extensions: 16052
Number of successful extensions: 52
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)