Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0096
         (503 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   3.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.4  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   4.5  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   4.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   4.5  
AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding pr...    23   5.9  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   5.9  
AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding pr...    23   5.9  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   7.8  
AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    23   7.8  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 101 PPDDEWLPSPMDFRNARGRAKLLPTAKTEVY 9
           PPD  W P  + F NA G  ++   +   +Y
Sbjct: 104 PPDKVWKPDIVLFNNADGNYEVRYKSNVLIY 134


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 18  GFSGRQQLGSAPGIPEVHG 74
           GF GR+ +  APGI  V G
Sbjct: 218 GFQGRKGMMGAPGIQGVRG 236


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 367 CACKAIKLGNARVFPVTTL*NDGQ*IVI 284
           C   ++ LGN   FP T L N G   VI
Sbjct: 88  CIALSVGLGNVWRFPFTALENGGGAFVI 115


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 367 CACKAIKLGNARVFPVTTL*NDGQ*IVI 284
           C   ++ LGN   FP T L N G   VI
Sbjct: 88  CIALSVGLGNVWRFPFTALENGGGAFVI 115


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +1

Query: 376 LPAGVITKRPAPDRPFQQLRNLN 444
           LP    TK PA  RP   L NLN
Sbjct: 522 LPKDQNTKNPAKYRPLTCLSNLN 544


>AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding
           protein AgamOBP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 461 TICHSPFRLRNCWKGRSGAGLFVI 390
           T+C   F L  CWK       F++
Sbjct: 121 TLCDKAFWLHKCWKQSDPKHYFLV 144


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 24  SGRQQLGSAPGIPEVHGRR*P 86
           +GR + G  PG  E H RR P
Sbjct: 318 AGRLRTGPVPGAAERHRRRRP 338


>AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding
           protein protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 461 TICHSPFRLRNCWKGRSGAGLFVI 390
           T+C   F L  CWK       F++
Sbjct: 121 TLCDKAFWLHKCWKQSDPKHYFLV 144


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 125 LVCRRAYGPPDDEW 84
           +V RR YG P D W
Sbjct: 171 VVARRVYGKPCDVW 184


>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 461 TICHSPFRLRNCWK 420
           T+C   F L  CWK
Sbjct: 121 TLCDKAFWLHKCWK 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,579
Number of Sequences: 2352
Number of extensions: 12947
Number of successful extensions: 35
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)