Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0096
         (503 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209031-1|BAD92268.1| 1106|Homo sapiens complement component 5 ...    31   1.7  
AF244812-1|AAG34567.1|  306|Homo sapiens SCAN domain-containing ...    30   5.3  
AF229246-1|AAG33966.1|  306|Homo sapiens SCAND2 protein.               30   5.3  
U68723-1|AAB58252.1|  490|Homo sapiens checkpoint suppressor 1 p...    29   9.2  
BC007506-1|AAH07506.1|  468|Homo sapiens checkpoint suppressor 1...    29   9.2  
AC007263-1|AAF18259.1|  226|Homo sapiens checkpoint supporessor ...    29   9.2  

>AB209031-1|BAD92268.1| 1106|Homo sapiens complement component 5
           variant protein.
          Length = 1106

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 476 KILTLTICHSPFRLRNCWKGRSG 408
           +++  ++ H+P  LR CWKGR G
Sbjct: 32  RVVGASLSHAPLPLRYCWKGRGG 54


>AF244812-1|AAG34567.1|  306|Homo sapiens SCAN domain-containing
           protein 2 protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 370 PLLPAGVITKRPAPDRPFQQLRNLNGEWQ 456
           P    G +T+ PAP RP Q+ R   G W+
Sbjct: 211 PSATEGALTRTPAPRRPLQRRRPGTGPWR 239


>AF229246-1|AAG33966.1|  306|Homo sapiens SCAND2 protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 370 PLLPAGVITKRPAPDRPFQQLRNLNGEWQ 456
           P    G +T+ PAP RP Q+ R   G W+
Sbjct: 211 PSATEGALTRTPAPRRPLQRRRPGTGPWR 239


>U68723-1|AAB58252.1|  490|Homo sapiens checkpoint suppressor 1
           protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 180 SCKPQHSGGRG*ILYCIAVTPSRGGRYPIRPIVSRITIHWPSFYNVVTG 326
           +CKP +S      L  +A+  S   R P++ I + I  H+P F N  TG
Sbjct: 112 NCKPPYSFS---CLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTG 157


>BC007506-1|AAH07506.1|  468|Homo sapiens checkpoint suppressor 1
           protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 180 SCKPQHSGGRG*ILYCIAVTPSRGGRYPIRPIVSRITIHWPSFYNVVTG 326
           +CKP +S      L  +A+  S   R P++ I + I  H+P F N  TG
Sbjct: 112 NCKPPYSFS---CLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTG 157


>AC007263-1|AAF18259.1|  226|Homo sapiens checkpoint supporessor 1
           protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 180 SCKPQHSGGRG*ILYCIAVTPSRGGRYPIRPIVSRITIHWPSFYNVVTG 326
           +CKP +S      L  +A+  S   R P++ I + I  H+P F N  TG
Sbjct: 112 NCKPPYSFS---CLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTG 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,965,724
Number of Sequences: 237096
Number of extensions: 2057532
Number of successful extensions: 4416
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4416
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)