Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0095
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.4  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   5.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.8  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 352 STDPYGVLPLWRSNDLN 402
           + DPYG++  W ++ LN
Sbjct: 141 AVDPYGLVAQWATDALN 157


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 332 LPSNRCGSRNRSTTSLAPPLYTG 264
           LP++RC SR  S + + P   +G
Sbjct: 79  LPNSRCNSRESSDSLVQPRCPSG 101


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 576 GMKACGIHEP 547
           G KACG H P
Sbjct: 35  GCKACGYHSP 44


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 564 CGIHEPTYNSIIKCD 520
           CG + P+ NS + CD
Sbjct: 636 CGDYVPSGNSTVDCD 650


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -3

Query: 283 PLHCTQEVLLTHRASLP 233
           P  C Q  + TH+  +P
Sbjct: 559 PADCQQNCMCTHKVDIP 575


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,893
Number of Sequences: 336
Number of extensions: 3206
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)