Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0095
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 200 5e-52
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 200 5e-52
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 200 5e-52
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 200 5e-52
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 200 5e-52
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 200 5e-52
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 200 5e-52
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 200 5e-52
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 200 5e-52
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 194 3e-50
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 190 8e-49
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 99 2e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 90 1e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 53 2e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 45 5e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.47
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.47
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.47
AF047653-5|AAT92057.1| 117|Caenorhabditis elegans Hypothetical ... 29 1.9
AF047653-4|AAQ91897.1| 113|Caenorhabditis elegans Hypothetical ... 29 1.9
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 29 1.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 200 bits (489), Expect = 5e-52
Identities = 95/114 (83%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSFLGM++ GIHE +YNSI+KCD+DIR+ ++ TTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 200 bits (489), Expect = 5e-52
Identities = 95/114 (83%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSFLGM++ GIHE +YNSI+KCD+DIR+ ++ TTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 200 bits (489), Expect = 5e-52
Identities = 95/114 (83%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSFLGM++ GIHE +YNSI+KCD+DIR+ ++ TTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 200 bits (489), Expect = 5e-52
Identities = 95/114 (83%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSFLGM++ GIHE +YNSI+KCD+DIR+ ++ TTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 200 bits (489), Expect = 5e-52
Identities = 95/114 (83%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSFLGM++ GIHE +YNSI+KCD+DIR+ ++ TTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 200 bits (489), Expect = 5e-52
Identities = 95/114 (83%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSFLGM++ GIHE +YNSI+KCD+DIR+ ++ TTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 200 bits (489), Expect = 5e-52
Identities = 95/114 (83%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSFLGM++ GIHE +YNSI+KCD+DIR+ ++ TTMYPGIADRMQKEITALA
Sbjct: 219 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 278
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 279 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 200 bits (489), Expect = 5e-52
Identities = 95/114 (83%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSFLGM++ GIHE +YNSI+KCD+DIR+ ++ TTMYPGIADRMQKEITALA
Sbjct: 249 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 308
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 309 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 200 bits (489), Expect = 5e-52
Identities = 95/114 (83%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSFLGM++ GIHE +YNSI+KCD+DIR+ ++ TTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 194 bits (474), Expect = 3e-50
Identities = 94/114 (82%), Positives = 102/114 (89%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSFLGM++ GIHE +YNSI+KCD+DIR+ ++ TTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
P TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 P-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 190 bits (462), Expect = 8e-49
Identities = 90/114 (78%), Positives = 99/114 (86%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQP+F+GM+ GIHE TY SI+KCDVDIR+ ++ T+M+PGIADRMQKEI LA
Sbjct: 262 FQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLA 321
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 99.1 bits (236), Expect = 2e-21
Identities = 47/114 (41%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
F+P +G + G+ SI+KCDVD+R+T ++ TT++ G DR+ E+ +A
Sbjct: 261 FKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIA 320
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
P+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 321 PADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 89.8 bits (213), Expect = 1e-18
Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Frame = -1
Query: 522 DVDIRRT*-RQPGIVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 355
D+DIR T + ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 354 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 259
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 70.5 bits (165), Expect = 8e-13
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITAL- 421
FQP + ++ G+ E + I D+D R + ++ TTMYPG+ R++KE+ L
Sbjct: 266 FQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLY 325
Query: 420 ----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 283
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 326 LDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/100 (31%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*-RQPGIVRWTTMYPGIADRMQKEITALA 418
F+P G+ G+H+ + +I++C +D RRT R + ++ PGIA+++++E++ +
Sbjct: 440 FKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVV 499
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 298
P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 500 PNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 18/125 (14%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIK-CDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITAL 421
F P F + T +++I+ C +D+RR + ++ +TM+ A ++Q+++ L
Sbjct: 290 FHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRL 349
Query: 420 A----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 289
+ P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E
Sbjct: 350 SDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYME 409
Query: 288 SGPSI 274
GPSI
Sbjct: 410 RGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIV-RWTTMYPGIADRMQKEITALA 418
F PS + + CG+ E SI +C +R + IV ++ +PG +R+++E+ ++
Sbjct: 277 FNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSML 336
Query: 417 PSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 274
P+ + + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 337 PAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIV-RWTTMYPGIADRMQKEITALA 418
F PS + + CG+ E SI +C +R + IV ++ +PG +R+++E+ ++
Sbjct: 277 FNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSML 336
Query: 417 PSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 274
P+ + + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 337 PAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 361 PYGVLPLWRSNDLNLHCRWGESCD 432
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 361 PYGVLPLWRSNDLNLHCRWGESCD 432
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 361 PYGVLPLWRSNDLNLHCRWGESCD 432
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AF047653-5|AAT92057.1| 117|Caenorhabditis elegans Hypothetical
protein W02F12.4c protein.
Length = 117
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 569 KLAASTSPHITPS*SATWTSEELDANPVLSGGPPCTLE-SPT 447
K ++ +P TPS ATWT D P GPP L+ SPT
Sbjct: 15 KRSSDFTPTTTPSKIATWTLHG-DVTPERKRGPPILLKASPT 55
>AF047653-4|AAQ91897.1| 113|Caenorhabditis elegans Hypothetical
protein W02F12.4b protein.
Length = 113
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 569 KLAASTSPHITPS*SATWTSEELDANPVLSGGPPCTLE-SPT 447
K ++ +P TPS ATWT D P GPP L+ SPT
Sbjct: 15 KRSSDFTPTTTPSKIATWTLHG-DVTPERKRGPPILLKASPT 55
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 569 KLAASTSPHITPS*SATWTSEELDANPVLSGGPPCTLE-SPT 447
K ++ +P TPS ATWT D P GPP L+ SPT
Sbjct: 15 KRSSDFTPTTTPSKIATWTLHG-DVTPERKRGPPILLKASPT 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,000,671
Number of Sequences: 27780
Number of extensions: 301137
Number of successful extensions: 766
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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