Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0095
(594 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 189 1e-48
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 188 2e-48
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 187 6e-48
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 187 6e-48
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 186 1e-47
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 186 1e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 181 4e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 181 4e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 167 5e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 161 4e-40
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 145 2e-35
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 142 1e-34
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 92 2e-19
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 75 3e-14
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 68 5e-12
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 56 1e-08
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 44 1e-04
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 43 2e-04
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 37 0.009
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.0
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.3
At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transfera... 29 2.3
At1g22370.1 68414.m09508 UDP-glucoronosyl/UDP-glucosyl transfera... 29 2.3
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 29 3.1
At2g39440.1 68415.m04841 expressed protein 29 3.1
At5g43500.2 68418.m05318 expressed protein 28 4.1
At5g43500.1 68418.m05319 expressed protein 28 4.1
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 28 4.1
At2g42760.1 68415.m05295 expressed protein 28 4.1
At2g01210.1 68415.m00033 leucine-rich repeat transmembrane prote... 28 4.1
At3g18020.1 68416.m02290 pentatricopeptide (PPR) repeat-containi... 28 5.4
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 28 5.4
At2g27610.1 68415.m03349 pentatricopeptide (PPR) repeat-containi... 27 7.1
At1g03560.1 68414.m00337 pentatricopeptide (PPR) repeat-containi... 27 7.1
At5g56690.1 68418.m07076 F-box family protein contains F-box dom... 27 9.4
At4g32620.1 68417.m04644 expressed protein predicted protein T10... 27 9.4
At4g09600.1 68417.m01579 gibberellin-regulated protein 3 (GASA3)... 27 9.4
At1g69200.1 68414.m07921 pfkB-type carbohydrate kinase family pr... 27 9.4
At1g21630.1 68414.m02708 calcium-binding EF hand family protein ... 27 9.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 189 bits (461), Expect = 1e-48
Identities = 89/114 (78%), Positives = 100/114 (87%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPS +GM+A GIHE TYNSI+KCDVDIR+ ++ TTM+PGIADRM KEITALA
Sbjct: 264 FQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALA 323
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 188 bits (459), Expect = 2e-48
Identities = 89/114 (78%), Positives = 100/114 (87%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPS +GM+A GIHE TYNSI+KCDVDIR+ ++ +TM+PGIADRM KEITALA
Sbjct: 264 FQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALA 323
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 187 bits (455), Expect = 6e-48
Identities = 88/114 (77%), Positives = 99/114 (86%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSF+GM+A GIHE TYNSI+KCDVDIR+ ++ TTM+ GIADRM KEITALA
Sbjct: 264 FQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALA 323
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 187 bits (455), Expect = 6e-48
Identities = 88/114 (77%), Positives = 99/114 (86%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSF+GM+A GIHE TYNSI+KCDVDIR+ ++ TTM+ GIADRM KEITALA
Sbjct: 264 FQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALA 323
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 186 bits (453), Expect = 1e-47
Identities = 87/114 (76%), Positives = 99/114 (86%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
+QPS +GM+ GIHE TYNSI+KCDVDIR+ ++ TTM+PGIADRM KEITALA
Sbjct: 264 YQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALA 323
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 186 bits (453), Expect = 1e-47
Identities = 87/114 (76%), Positives = 99/114 (86%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
+QPS +GM+ GIHE TYNSI+KCDVDIR+ ++ TTM+PGIADRM KEITALA
Sbjct: 264 YQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALA 323
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 181 bits (440), Expect = 4e-46
Identities = 86/114 (75%), Positives = 97/114 (85%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPS +GM+ GIHE TYNSI+KCDVDIR+ ++ TTM+ GI DRM KEITALA
Sbjct: 264 FQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALA 323
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 181 bits (440), Expect = 4e-46
Identities = 86/114 (75%), Positives = 97/114 (85%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPS +GM+ GIHE TYNSI+KCDVDIR+ ++ TTM+ GI DRM KEITALA
Sbjct: 264 FQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALA 323
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
PS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 167 bits (406), Expect = 5e-42
Identities = 78/114 (68%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQ S +GM+ GIHE TYNSI+KCDVDIR+ ++ TTM+PGIADRM KEI ALA
Sbjct: 265 FQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALA 324
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
P +MKIK++APPERKYSVW+GGSILASLS+F MWI+K EYDE G +IVHRKCF
Sbjct: 325 PPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 161 bits (390), Expect = 4e-40
Identities = 75/114 (65%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPS +GM+ GIHE TYNSI+KCD DIR+ ++ TTM+ GI +RM KEI ALA
Sbjct: 216 FQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALA 275
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
+ M+IKI+APPERKYSVWIGGSILASLST++QMWI+K EY+E+GP+IVH KCF
Sbjct: 276 AANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 145 bits (352), Expect = 2e-35
Identities = 71/98 (72%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPSF+GM+A GIHE TYNSI+KCDVDIR+ ++ TTM+ GIADRM KEITALA
Sbjct: 264 FQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALA 323
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 304
PS+MKIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 142 bits (345), Expect = 1e-34
Identities = 68/113 (60%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQPS +G ++ GIHE T NSI+KC VD RR ++ TTM GI +RM KE+ AL
Sbjct: 253 FQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALV 312
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 259
PS+MK+K++ PPE + SVWIGGSILASLSTF QMWI+K EY+E G +IVHRKC
Sbjct: 313 PSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 92.3 bits (219), Expect = 2e-19
Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Frame = -1
Query: 561 GIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALAPSTMKIKIIAP 385
G+ SI KCDVDIRR ++ T+ + +R++K++ +P + ++K++A
Sbjct: 336 GLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLAS 395
Query: 384 ---PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 259
ER++SVWIGGSILASL +FQQMW SK EY+E G S + RKC
Sbjct: 396 GNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 75.4 bits (177), Expect = 3e-14
Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIV-RWTTMYPGIADRMQKEITALA 418
FQPS LG++ GI E I + R + ++ TT G R QKE L
Sbjct: 245 FQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LC 303
Query: 417 PSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
S ++ ++ PPE YS W+GG+ILA + Q ++K +YDE+GPS+VHRKCF
Sbjct: 304 SSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEITALA 418
FQP+ LGM G+ E +I C ++ Q I+ +T++P + +R++ E+ L
Sbjct: 307 FQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLV 366
Query: 417 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 256
P +KI + VW GGS+LAS F+ M ++K EY+E G + R+ F
Sbjct: 367 PDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 56.4 bits (130), Expect = 1e-08
Identities = 34/123 (27%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*RQPGIVRW-TTMYPGIADRMQKEI---- 430
F P + ++ G+ + + I + D+D R Q ++ +TMYPG+ R++KEI
Sbjct: 263 FTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRY 322
Query: 429 --TALAPST-----MKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESGPSI 274
T L + ++++I PP RK+ V++GG++LA + + WI++++Y E G +
Sbjct: 323 LDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEGINC 382
Query: 273 VHR 265
+++
Sbjct: 383 LNK 385
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDV----DIRRT*RQPGIVRWTTMYPGIADRMQKEIT 427
FQP GM+A +H+ + CD + + + PG+++R+++E+
Sbjct: 357 FQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQ 416
Query: 426 ALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEY 295
PS++ I++I PP + W G ++++LS F W I+++++
Sbjct: 417 DHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/45 (35%), Positives = 31/45 (68%)
Frame = -1
Query: 408 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 274
+++ +++ P ++++VW GGS+L+S F +K+EY+E G SI
Sbjct: 372 VEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 37.1 bits (82), Expect = 0.009
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = -1
Query: 594 FQPSFLGMKACGIHEPTYNSIIKCDVDIRRT*-RQPGIVRWT---TMYPGIADRMQKEIT 427
F P+ +G+ G+ E SI + D + R + T ++ PG+ +R++ I
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERLECGIR 662
Query: 426 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 283
+ P I ++ + W G S A+ F +K +YDE G
Sbjct: 663 MIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDEKG 710
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 358 DPYGVLPLWRSNDLNLHCRW-GESCD 432
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +1
Query: 352 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDS 459
S DP GVL W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transferase
family protein glycosyltransferase family
Length = 479
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = -3
Query: 328 LPTDVDLETGVRRVWPLHCTQEVLLTHRASLPPAARGRLLNSGL*SPL 185
LP D +ET RR+ C QE +L+H PA G L +SG S L
Sbjct: 340 LPPDFLIETANRRMLASWCPQEKVLSH-----PAVGGFLTHSGWNSTL 382
>At1g22370.1 68414.m09508 UDP-glucoronosyl/UDP-glucosyl transferase
family protein glycosyltransferase family
Length = 309
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = -3
Query: 328 LPTDVDLETGVRRVWPLHCTQEVLLTHRASLPPAARGRLLNSGL*SPL 185
LP D +ET RR+ C QE +L+H PA G L +SG S L
Sbjct: 170 LPPDFLIETANRRMLASWCPQEKVLSH-----PAVGGFLTHSGWNSTL 212
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 397 DHCSSREEVLRMDRWIDPRLPLYLPTDVDLETGVRRV 287
D C + +L MDR + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 307 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCD 432
R+P G E GEDR DP + + R NDL + + + D
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAAD 81
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = -1
Query: 561 GIHEPTYNSIIKCD-VDIRRT*RQP-GIVRWTTMYPGIADRMQKEITALAPSTMKIKII- 391
G+ E +SI+ +D+RR ++ + G+ +++ + P T I +
Sbjct: 461 GLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQ 520
Query: 390 ---APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 283
+ E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 521 VLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = -1
Query: 561 GIHEPTYNSIIKCD-VDIRRT*RQP-GIVRWTTMYPGIADRMQKEITALAPSTMKIKII- 391
G+ E +SI+ +D+RR ++ + G+ +++ + P T I +
Sbjct: 473 GLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQ 532
Query: 390 ---APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 283
+ E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 533 VLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 361 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVH 468
P GV+PL NDL+ WG S F + +H
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPFAWRSAMKRTLH 227
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 436 GNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTDVDLETGVRRVW 284
GN ++RP +E DHC R+ ++ I R+P ++VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At2g01210.1 68415.m00033 leucine-rich repeat transmembrane protein
kinase, putative
Length = 716
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +1
Query: 358 DPYGVLPLWRSNDLNLHCRW-GESCDFL---LHTVGDSRVHGGPPDNTGLASSSSDVHVA 525
DP G L W S+D N C W G +C L ++ ++G P + G SS H+
Sbjct: 38 DPTGSLNNWNSSDENA-CSWNGVTCKELRVVSLSIPRKNLYGSLPSSLGFLSSLR--HLN 94
Query: 526 LYDGVICGLVDAASFHSQ 579
L G + FH Q
Sbjct: 95 LRSNRFYGSLPIQLFHLQ 112
>At3g18020.1 68416.m02290 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 688
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -1
Query: 516 DIRRT*RQPGIVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSI-LA 340
D+R P +V +TT+ G + + E+ M++ I P SV IGG + +
Sbjct: 187 DMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMR 246
Query: 339 SLSTFQQMWISKQEY 295
+ T +++ EY
Sbjct: 247 DVETGRKLMKELWEY 261
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 361 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVH 468
P GV+PL NDL+ WG S F + +H
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPFAWRSAVKRTLH 224
>At2g27610.1 68415.m03349 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 868
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/67 (31%), Positives = 27/67 (40%)
Frame = -1
Query: 486 IVRWTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 307
+V WT M G KE S MK K + P E YSV + + S S +
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQ-VV 420
Query: 306 KQEYDES 286
K Y+ S
Sbjct: 421 KTNYERS 427
>At1g03560.1 68414.m00337 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 660
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 323 WKVEREARIDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMVVHRTI 487
W+ +E I+P ++T FL G + +F VD A V I +V + T+
Sbjct: 210 WRKMKENGIEPTLYTYNFLMNGLVSAMF-VDSAERVFEVMESGRIKPDIVTYNTM 263
>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 435 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 289
EI+ L P + +KI+A K V I S+L+ F MW+ K +YD+
Sbjct: 3 EISGL-PDDLLVKILAFLPTK--VAISTSVLSKQWRFLWMWLPKLKYDD 48
>At4g32620.1 68417.m04644 expressed protein predicted protein
T10M13.8, Arabidopsis thaliana
Length = 1544
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 349 RSTDPYGV--LPLWRSNDLNLHCRWGESCDFLL 441
+S DP GV LP+ S DL L C W ES F L
Sbjct: 572 KSPDP-GVEFLPIEDSGDLELCCPWNESEQFEL 603
>At4g09600.1 68417.m01579 gibberellin-regulated protein 3 (GASA3) /
gibberellin-responsive protein 3 identical to SP|P46687
Gibberellin-regulated protein 3 precursor {Arabidopsis
thaliana}
Length = 99
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -1
Query: 348 ILASLSTFQQMWISKQEYDESGPSIVHRKCF*RTARRCLQQPAAGCSIQACNLR*FNC 175
IL L+TF+ + + E + G +V C R RC + ++ACN + C
Sbjct: 13 ILFCLTTFE-LHVHAAEDSQVGEGVVKIDCGGRCKGRCSKSSRPNLCLRACNSCCYRC 69
>At1g69200.1 68414.m07921 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 614
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Frame = +1
Query: 415 WGESCDFLLHTVGDSRVHGGPPDNTGLASSSSDVHVALY--------DGVICGLV 555
W E+ L T G S++H ++ G S DV + + DG++ GL+
Sbjct: 449 WHENLKVLFVTNGTSKIHYYTKEHNGAVSGMEDVPITPFTRDMSASGDGIVAGLI 503
>At1g21630.1 68414.m02708 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain; ESTs gb|T44428 and gb|AA395440 come from this
gene
Length = 1218
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 495 QPGIVRWTTMYPGIADRMQKE-ITALAPSTMKIK-IIAPPERKYSVW 361
QPGI + D+++ E T + T+ I+ +IAPP+ K S W
Sbjct: 754 QPGIQEGAADWDEDWDKLEDEGFTFVKELTLDIQNVIAPPKEKSSAW 800
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,380,482
Number of Sequences: 28952
Number of extensions: 289821
Number of successful extensions: 874
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -