Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0093
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 3e-36
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 135 3e-32
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 119 2e-27
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 114 7e-26
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 9e-26
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 108 3e-24
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 102 3e-22
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 100 2e-21
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 95 4e-20
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 93 2e-19
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 93 2e-19
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 3e-19
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 84 8e-17
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 83 1e-16
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 79 2e-15
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 78 5e-15
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 73 3e-13
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 64 9e-11
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 60 2e-09
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 58 6e-09
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 57 1e-08
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 57 1e-08
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 54 8e-08
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 52 3e-07
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 51 9e-07
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 50 2e-06
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 48 5e-06
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 48 7e-06
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 48 7e-06
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 46 2e-05
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 46 4e-05
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 45 5e-05
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 45 5e-05
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 45 6e-05
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 44 1e-04
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 44 1e-04
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 43 2e-04
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 42 4e-04
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 41 0.001
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 40 0.001
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 40 0.002
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 38 0.007
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 37 0.012
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 37 0.016
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 36 0.021
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 36 0.028
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 36 0.038
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 35 0.066
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 33 0.20
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 33 0.20
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 33 0.20
SB_58754| Best HMM Match : PucR (HMM E-Value=5.5) 33 0.26
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_18664| Best HMM Match : PucR (HMM E-Value=5.5) 33 0.26
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 32 0.35
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 32 0.46
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 31 0.61
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 31 0.81
SB_44233| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_214| Best HMM Match : Arf (HMM E-Value=0) 30 1.4
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 30 1.9
SB_58695| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_38625| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_3006| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_47450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_32003| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_39220| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_20457| Best HMM Match : fn3 (HMM E-Value=5.1e-12) 27 9.9
SB_14086| Best HMM Match : POR (HMM E-Value=7.7) 27 9.9
SB_38097| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 27 9.9
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 27 9.9
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 148 bits (359), Expect = 3e-36
Identities = 77/105 (73%), Positives = 83/105 (79%), Gaps = 21/105 (20%)
Frame = +2
Query: 257 SGVGKSCLLLRFA---------------------DDTYTESYISTIGVDFKIRTVDLNGK 373
SGVGKSCLLLRFA DDTYTESYISTIGVDFKIRT++L+GK
Sbjct: 17 SGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIRTIELDGK 76
Query: 374 TIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVK 508
TIKLQIWDTAGQERFRTITSSYYRGAHGII+VYD TDQ+SF+NVK
Sbjct: 77 TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVK 121
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/36 (86%), Positives = 36/36 (100%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFST 612
++WL+EIDRYAC+NVNKLLVGNKCDLTTKKVVDF+T
Sbjct: 121 KQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDFTT 156
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 216 PEYDYLFKLLLIGTLELG 269
PEYDYLFKLLLIG +G
Sbjct: 3 PEYDYLFKLLLIGDSGVG 20
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 135 bits (326), Expect = 3e-32
Identities = 58/80 (72%), Positives = 73/80 (91%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGKS LLLRFADDT++ +YISTIGVDFKIRT+ ++GKTIKLQIWDTAGQERFRT+T++
Sbjct: 17 SGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTA 76
Query: 437 YYRGAHGIIIVYDCTDQDSF 496
YYR AHGI+++YD + ++F
Sbjct: 77 YYRSAHGIVLIYDVNESETF 96
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFST 612
+WLEE+ YAC+ VN +LVGNKCDL + V ++T
Sbjct: 101 QWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNT 135
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 219 EYDYLFKLLLIGTLELG 269
EYDYLFKLLLIG +G
Sbjct: 4 EYDYLFKLLLIGDSGVG 20
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 119 bits (286), Expect = 2e-27
Identities = 49/84 (58%), Positives = 70/84 (83%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
S VGK+ L R+ADD++T +++ST+G+DFK++TV N K +KLQIWDTAGQER+RTIT++
Sbjct: 30 SAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTA 89
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G I++YD T+++SF V+
Sbjct: 90 YYRGAMGFILMYDITNEESFQAVQ 113
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 114 bits (274), Expect = 7e-26
Identities = 48/68 (70%), Positives = 61/68 (89%)
Frame = +2
Query: 305 YTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTD 484
++ SYI+TIGVDFKIRT++++G+ +KLQIWDTAGQERFRTITS+YYRG HG+I+VYD T
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 485 QDSFSNVK 508
D+F NVK
Sbjct: 62 ADTFVNVK 69
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVVD 603
++WL EID+ CD+V ++LVGNK D +KKVV+
Sbjct: 69 KRWLHEIDQN-CDDVIRILVGNKDDCPSKKVVE 100
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 113 bits (273), Expect = 9e-26
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGKS LLLRF DDT+ +TIGVDFK++T+ + G KL IWDTAGQERFRT+T S
Sbjct: 17 SGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQERFRTLTPS 76
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G+I+VYD +++F ++
Sbjct: 77 YYRGAQGVILVYDTNSRETFDKLE 100
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 108 bits (260), Expect = 3e-24
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGKS L RF D + S+ +TIGVDF+I+T+++NG+ I +Q+WDTAGQERFR+IT
Sbjct: 905 SGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQERFRSITKQ 964
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
Y+R A GI+I YD T + SF+N+K
Sbjct: 965 YFRKADGILIFYDVTAESSFTNLK 988
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDL 582
+KW+ ++ A + V K+++GNK DL
Sbjct: 988 KKWMVSVEEGAEEGVAKMVLGNKTDL 1013
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 102 bits (244), Expect = 3e-22
Identities = 47/84 (55%), Positives = 61/84 (72%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGKS LL RF + + STIGV+F R++ + GK IK Q+WDTAGQER+R ITS+
Sbjct: 21 SGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQERYRAITSA 80
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G ++VYD T Q +F +V+
Sbjct: 81 YYRGAVGAVLVYDLTKQKTFQDVE 104
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 496 QQREKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
Q E+WL E+ +A + +LVGNKCDL + V
Sbjct: 101 QDVERWLLEVREHADPTIVVMLVGNKCDLKHLRAV 135
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 101 bits (243), Expect = 4e-22
Identities = 44/83 (53%), Positives = 62/83 (74%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
+ VGK+CL+ +F + + TIGVDF I+TVD++G+ +KLQIWDTAGQERFR+IT S
Sbjct: 16 ANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQS 75
Query: 437 YYRGAHGIIIVYDCTDQDSFSNV 505
YY A G+I+ YD T++ SF ++
Sbjct: 76 YYHNADGVIVTYDITNKKSFESL 98
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDF 606
+WL++ +RY +V +VGNK DL+T + VDF
Sbjct: 100 QWLDDTNRYTSKDVLIAIVGNKSDLSTNRKVDF 132
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 99.5 bits (237), Expect = 2e-21
Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKT-IKLQIWDTAGQERFRTITS 433
S VGKS LL +F + + E+ T+GVDF +R ++L G IKLQIWDTAGQERFR+IT
Sbjct: 22 STVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITY 81
Query: 434 SYYRGAHGIIIVYDCTDQDSFSNV 505
SYYR G +I+YD T++DSF NV
Sbjct: 82 SYYRNTVGCLIIYDITNRDSFVNV 105
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 95.1 bits (226), Expect = 4e-20
Identities = 39/82 (47%), Positives = 61/82 (74%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGKS L+ RF DD + +TIGVDF I DL+GK +KLQ+WDTAG+E++R ++ S++
Sbjct: 21 VGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEKYRALSRSFF 80
Query: 443 RGAHGIIIVYDCTDQDSFSNVK 508
RGA G ++V+D + ++SF +++
Sbjct: 81 RGADGALLVFDVSVKESFDSIR 102
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 481 RPGFIQQREKWLEEIDRYACDNVNKLLVGNKCDLTTKKV--VDFSTVSNMRN-NW 636
+ F R+ WL E + + + +LVGNKCD KKV D +S+ N +W
Sbjct: 95 KESFDSIRDYWLHEFHKVSGSDTITILVGNKCDKKDKKVSEEDIQNLSSCYNLSW 149
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
S VGKS L+LRF + E STIG F +TV L+ T+K +IWDTAGQER+ ++
Sbjct: 30 SAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPM 89
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVKS 511
YYRGA I+VYD T+QD+F+ K+
Sbjct: 90 YYRGAQAAIVVYDITNQDTFARAKT 114
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 511 WLEEIDRYACDNVNKLLVGNKCDLTTKKVVDF 606
W++E+ R A N+ L GNK DL +K++V++
Sbjct: 115 WVKELQRQASPNIVIALSGNKADLASKRMVEY 146
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/84 (47%), Positives = 62/84 (73%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
+ VGKS +LR + + + ST+GVDF+++T+ ++GKT LQ+WDTAGQERFR+I S
Sbjct: 451 AAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQERFRSIAKS 510
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
Y+R A G++++YD T + SF +V+
Sbjct: 511 YFRKADGVLLLYDVTCETSFLDVR 534
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 92.3 bits (219), Expect = 3e-19
Identities = 39/82 (47%), Positives = 59/82 (71%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGK+ L+ RF + ++ ST+GVD R +D++G +KLQ WDTAGQE+FR IT SY
Sbjct: 21 GVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSY 80
Query: 440 YRGAHGIIIVYDCTDQDSFSNV 505
YR A +I+V+D T++ +F+++
Sbjct: 81 YRNADAVILVFDITNRGTFASI 102
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDL 582
+WL + +Y N+ K+LVGNK DL
Sbjct: 104 QWLMNVQKYTNKNILKVLVGNKTDL 128
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L RF D + E Y TIG+DF +TV L+ ++LQIWDTAGQERFR + SY
Sbjct: 173 GVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQERFRCLIHSY 232
Query: 440 YRGAHGIIIVYDCTDQDSFSNV 505
R + +IV+D T+ SF +V
Sbjct: 233 IRDSEAALIVFDITNYTSFESV 254
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 84.2 bits (199), Expect = 8e-17
Identities = 34/60 (56%), Positives = 51/60 (85%)
Frame = +2
Query: 326 TIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV 505
TIGV+F + V++ GK++KLQIWDTAGQERFR++T SYYRGA G ++VYD + +++F+++
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSL 186
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 511 WLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFSTVS 618
WL + A N+ +LVGNK DL + V F S
Sbjct: 189 WLTDARTLASPNIVIILVGNKKDLDADREVTFLEAS 224
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/81 (46%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFR-TITS 433
S VGK+CL R + E +TIGVDF ++++LNG+ +KLQ+WDTAGQERFR ++
Sbjct: 55 SNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQERFRKSMVC 114
Query: 434 SYYRGAHGIIIVYDCTDQDSF 496
YYR + ++ +YD T + SF
Sbjct: 115 HYYRNVNAVVFMYDITRKCSF 135
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 511 WLEEIDRYACD-NVNKLLVGNKCDLTTKKVV 600
W+ E +A +V K+L+GNKCDL ++ V
Sbjct: 141 WIVEYRHHAYSGDVPKILIGNKCDLGLERTV 171
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/96 (41%), Positives = 64/96 (66%), Gaps = 11/96 (11%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV---DLN--------GKTIKLQIWDTA 403
SGVGK+ LL ++ D + ++ TIG+DF+ + V LN G+ I LQ+WDTA
Sbjct: 115 SGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIHLQLWDTA 174
Query: 404 GQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKS 511
GQERFR++T++++R A G ++V+D T + SF N+++
Sbjct: 175 GQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRN 210
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = +2
Query: 368 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV 505
GK IKLQIWDTAGQERF TIT++YYRGA GI++VYD T++ SFSN+
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI 47
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
KWL++ID +A ++V ++LVGNKCD+ K+V+
Sbjct: 49 KWLKKIDDHANEDVKRMLVGNKCDMYDKRVI 79
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L+ RF + TIGV+F + V L+G++ LQIWDTAGQERF+++ + +
Sbjct: 221 GVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRTPF 280
Query: 440 YRGAHGIIIVYDCTDQDSFSNV 505
YRG+ ++VY D SF+N+
Sbjct: 281 YRGSDLCLLVYAVDDAKSFTNL 302
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/79 (43%), Positives = 51/79 (64%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
+GVGK+ L R ++ +T +TIG+D + V + K + L +WDTAG ERFRT+T +
Sbjct: 20 AGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVERFRTVTKN 79
Query: 437 YYRGAHGIIIVYDCTDQDS 493
YYRGAH I++++ D S
Sbjct: 80 YYRGAHACILMFNVDDPGS 98
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +2
Query: 377 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV 505
+KLQIWDTAGQERFRTIT SYYR +G+II YD T D+F NV
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNV 137
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFSTVSNMRNNW 636
+W E++ +YA +N KLLVGNK DL ++ V N +++
Sbjct: 139 RWGEDVQKYAPENAIKLLVGNKKDLEREREVSLEDAVNCASHY 181
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVD-LNGKTIKLQIWDTAGQERFRTITSSYY 442
GK + R+ ++ + Y TIGVDF ++T+ TI+LQIW AGQERF ++T YY
Sbjct: 30 GKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYY 89
Query: 443 RGAHGIIIVYDCTDQ 487
+GA ++++D Q
Sbjct: 90 KGADACVVLFDLERQ 104
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 64.1 bits (149), Expect = 9e-11
Identities = 27/38 (71%), Positives = 35/38 (92%)
Frame = +2
Query: 392 WDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV 505
W+ AGQERFRTITSSYYRGAHG++IVYD T ++S++N+
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNL 410
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
KWL E++ YA + V+ +LVGNK DL T + V
Sbjct: 412 KWLMEVETYASEGVHMILVGNKIDLDTDREV 442
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYI-STIGV-DFKIRTVDLNGKTIKLQIWDTAGQERFRTIT 430
SGVGKSCL+ + + + ++ ST+ + D + K IKL I DTAGQER+ +I
Sbjct: 359 SGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQERYFSIL 418
Query: 431 SSYYRGAHGIIIVYDCTDQDSF 496
+Y+RG G+ +V+D T + +F
Sbjct: 419 PAYFRGVQGVFLVFDITVEITF 440
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/80 (31%), Positives = 47/80 (58%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GK+CLL+ F+ D + E Y+ T+ ++ + ++++GK ++L +WDTAGQE + + Y
Sbjct: 5941 GKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYP 5999
Query: 446 GAHGIIIVYDCTDQDSFSNV 505
I++ + DS N+
Sbjct: 6000 DTDVILMCFSIDSPDSLENI 6019
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDL 582
EKW E+ + C NV +LVGNK DL
Sbjct: 6021 EKWTPEVKHF-CPNVPIILVGNKKDL 6045
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F + Y TI ++ + V ++ + L I DTAGQE F + Y
Sbjct: 21 GVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLDILDTAGQEEFSAMREQY 79
Query: 440 YRGAHGIIIVYDCTDQDSFSNV 505
R G ++V+ TD+ SF +
Sbjct: 80 MRSGEGFLLVFSVTDRSSFEEI 101
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/89 (32%), Positives = 46/89 (51%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
G GK+ + R + + YI+T+GV+ + IK +WDTAGQE+F + Y
Sbjct: 42 GTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGLRDGY 101
Query: 440 YRGAHGIIIVYDCTDQDSFSNVKSG*RRL 526
Y II++D T + ++ NV + R L
Sbjct: 102 YIQGQCAIIMFDVTSRVTYKNVPNWHRDL 130
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 511 WLEEIDRYACDNVNKLLVGNKCDLTTKKV 597
W +++R C+N+ +L GNK D+ +KV
Sbjct: 126 WHRDLER-VCENIPIVLCGNKVDIKDRKV 153
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDT 400
SGVGKS LL RF + + STIGV+F R++ ++GKTIK QIWDT
Sbjct: 20 SGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 219 EYDYLFKLLLIGTLELG 269
EYDYLFK++LIG +G
Sbjct: 7 EYDYLFKVVLIGDSGVG 23
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F + E Y TI DF + ++++ L+I DTAG E+F ++ Y
Sbjct: 13 GVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTEQFASMRDLY 71
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
+ G ++VY ++ +F+++K
Sbjct: 72 IKNGQGFLLVYSLINRQTFADLK 94
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 362 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKSG*RRL 526
+N K K IWDTAGQERF+++ YYR A I+VYD T + +F +++ R L
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIREL 58
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 511 WLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
W+ E+ RY ++ + GNKCD ++ V
Sbjct: 54 WIRELQRYGPQDIVIAVAGNKCDKADQRDV 83
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLN-----GKTIKLQIWDTAGQERFR 421
SGVGK+ L+ + S TIG +++ D GKT L+ WD G
Sbjct: 15 SGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDIGGSANHE 74
Query: 422 TITSSYYRGAHGIIIVYDCTDQDSFSNVK 508
S +Y G +G+I+V+D T++ SF+N++
Sbjct: 75 NSRSIFYNGINGLILVHDLTNRKSFTNLR 103
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +2
Query: 254 YSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITS 433
+ VGKS L ++F + + +SY TI F + + G+ L++ DTAGQ+ +
Sbjct: 14 FRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KNIKYKGQEFFLELVDTAGQDEYSIFPQ 72
Query: 434 SYYRGAHGIIIVYDCT 481
SY G HG I+VY T
Sbjct: 73 SYSMGIHGYILVYAVT 88
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGK+ LL+ + D + SY+ T + + TV++N K ++ DTAGQE F +
Sbjct: 28 GVGKTSLLVSYMMDGFPNSYVPTAFDTYHV-TVEVNKKLCMIEFCDTAGQEDFDALRPLC 86
Query: 440 YRGAHGIIIVYDCTDQDSFSNVKS 511
Y A I+ + SF+NV S
Sbjct: 87 YSSADVFIVCFSVVSPTSFANVAS 110
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVD-FKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
GVGK+ + R + D + E S +D I V + K +K+ +WDT G E + ++T +
Sbjct: 18 GVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGMEEYESLTRN 77
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
+Y + +++VY DS + VK
Sbjct: 78 HYSNSKVVLVVYSLDLPDSLAQVK 101
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTA 403
SGVGKS LL R+ + + +TIGV+ R V++ GKT++ QIWDTA
Sbjct: 27 SGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 50.8 bits (116), Expect = 9e-07
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GK+ + A ++E I T+G F +R V TIK +WD GQ RFR++ Y R
Sbjct: 32 GKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGNVTIK--VWDIGGQPRFRSMWERYCR 87
Query: 446 GAHGIIIVYDCTDQDSFSNVKS 511
G + I+ + D D D K+
Sbjct: 88 GVNCIVYMVDAADHDKLEASKN 109
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 50.8 bits (116), Expect = 9e-07
Identities = 25/84 (29%), Positives = 43/84 (51%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L+ + + YI T+ ++ + L+GK + +WDTAGQE + +
Sbjct: 15 GVGKSAFLITATTNAFPGEYIPTVFDNYS-SNIMLDGKAYNVGLWDTAGQEDYDRLRPLS 73
Query: 440 YRGAHGIIIVYDCTDQDSFSNVKS 511
Y ++ +D + SF N++S
Sbjct: 74 YPMTDVFLVCFDIGSRTSFENIES 97
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLL+ + + + Y+ T+ ++ + TV + G+ L ++DTAGQE + + Y
Sbjct: 14 VGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDYDRLRPLSY 72
Query: 443 RGAHGIIIVYDCTDQDSFSNVK 508
++ + SF NVK
Sbjct: 73 PQTDVFLVCFSVVSPSSFENVK 94
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +2
Query: 389 IWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKS 511
IWDTAGQERF+++ ++YRGA ++V+D T +SF + S
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDS 41
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/88 (30%), Positives = 44/88 (50%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GK+ +L R + S + T+G F + TV K I +WD GQ++ R + YY+
Sbjct: 8 GKTTILYRLKLEEVV-STVPTLG--FNVETVTY--KNISFTVWDIGGQDKIRALWRVYYQ 62
Query: 446 GAHGIIIVYDCTDQDSFSNVKSG*RRLI 529
G GII V D D++ ++ +L+
Sbjct: 63 GCQGIIFVVDSADRERAEEARNELHKLL 90
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQ-ERFRTITSS 436
GVGK+ LL+RF + Y TI ++ ++++++ T+ L+I DTA + + +
Sbjct: 15 GVGKTALLVRFLCHRFLGEYDPTIEDKYR-KSINIDDVTVTLEILDTASRGQNSCKLRDQ 73
Query: 437 YYRGAHGIIIVYDCTDQDSFSNV 505
+ R G I+VY D+ +F+N+
Sbjct: 74 FVREGDGFIVVYSTADRSTFANL 96
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
S VGK+ L+LRF + + Y TI DF I+ V N +T +LQI DT+G F +
Sbjct: 37 SSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTYEFPAMRKV 95
Query: 437 YYRGAHGIIIVYDCTDQDSFSNV 505
++VY +SF+ +
Sbjct: 96 DIAKGDAFVLVYSQDHPESFTKL 118
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/91 (28%), Positives = 44/91 (48%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SG G+ +L T + + T+ F + T+ K I +WD GQ++ R +
Sbjct: 117 SGRGRKTTILYKLKLKETVNTVPTVA--FNVETIS-PCKNITFSVWDIGGQDKIRRLWRH 173
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVKSG*RRLI 529
Y++GA GII V D D++ V+ R++
Sbjct: 174 YFQGAEGIIFVVDSADKERIFEVREELTRVL 204
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/81 (32%), Positives = 39/81 (48%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GK+ +L D + I TIG F + V+ K IK +WD GQ++ R + Y++
Sbjct: 102 GKTTILYHLKLDEPVNT-IPTIG--FNVEVVEY--KNIKFTVWDIGGQDKIRLLWRLYFQ 156
Query: 446 GAHGIIIVYDCTDQDSFSNVK 508
G+I V D D+D K
Sbjct: 157 ETQGLIFVVDSNDRDRIQEAK 177
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 407 QERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV 505
QER+R ITS+YYRGA G ++VYD SF N+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNL 34
Score = 35.1 bits (77), Expect = 0.050
Identities = 12/32 (37%), Positives = 25/32 (78%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDLTTKKVVD 603
KW+EE+ ++A D+++ +L+GNK DL ++++
Sbjct: 36 KWVEELRQHASDDLSIILIGNKSDLKHLRMIE 67
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 407 QERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV 505
QER+R ITS+YYRGA G ++VYD SF N+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNL 34
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFSTVSN 621
KW+EE+ ++A D+++ +L+GNK DL ++++ SN
Sbjct: 36 KWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRGSN 73
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +2
Query: 308 TESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTD 484
T S I TIG F + T+ K + L IWD GQ++ R + Y++G G++ V D +D
Sbjct: 44 TVSTIPTIG--FNVETLQPT-KNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSD 99
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2
Query: 320 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFS 499
I TIG F + TV+ K I +WD GQ++ R + Y++ G+I V D D++
Sbjct: 46 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVG 101
Query: 500 NVKSG*RRLI 529
+ R++
Sbjct: 102 EAREELNRML 111
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 365 NGKTIKLQIWDTAGQERFRTITSSYYR 445
NG+ I+L +WDTAGQE F IT +YYR
Sbjct: 30 NGEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +2
Query: 302 TYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCT 481
T+ ++ +S + F + TV+ K I +WD GQ++ R + Y++ G+I V D
Sbjct: 488 THIQAMVSPVQ-GFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSN 544
Query: 482 DQDSFSNVKSG*RRLI 529
D++ K R++
Sbjct: 545 DRERAGEAKEELSRML 560
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGK-TIKLQIWDTAGQERFRTITSS 436
GVGK+ L+ RF T++E Y T+G D ++V L+ L+I DTAG F +
Sbjct: 117 GVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTLSKDFNAFLEIMDTAGSYPFPAMKKL 175
Query: 437 YYRGAHGIIIVYDCTDQDS 493
+ A ++VY ++ S
Sbjct: 176 TIQNADAFVLVYSVDEKAS 194
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/107 (22%), Positives = 55/107 (51%)
Frame = +2
Query: 155 INSTTKLCEKQLLVQK*KNESRIRLFIQTTPDWYSGVGKSCLLLRFADDTYTESYISTIG 334
+++ ++ +K +++ + +IR+ + D S GK+ LL + + + E Y +T+
Sbjct: 209 VDTDSRTVDKADDIRETRPNGQIRIPVILVGD--SECGKTALLNAYVRNQFNEKYEATVF 266
Query: 335 VDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYD 475
V+++G+ I+L +WDT+G E + + Y ++I +D
Sbjct: 267 NSLST-AVEVDGERIELTLWDTSGHEDYDHVRPLSYNNVDIVLICFD 312
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2
Query: 320 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFS 499
I TIG F + +V+ K I +WD GQ++ R + Y++ G+I V D D++ +
Sbjct: 46 IPTIG--FNVESVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVN 101
Query: 500 NVK 508
K
Sbjct: 102 ESK 104
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +2
Query: 356 VDLNGKTIKLQIWDTAGQER--FRTITSSY---YRGAHGIIIVYDCTDQDSFSNV 505
++L GKT+ L I DT G+ R F S+ YR G +IV+D TD+ SF V
Sbjct: 10 LELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERV 64
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = +2
Query: 326 TIGVDFKIRTVDLN------GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVY 472
TIGVDF + ++ T+KLQ WD A ERF +T+ Y R G ++ +
Sbjct: 85 TIGVDFYVHFIEWRETDKKKDSTVKLQFWDVAEHERFLKMTAVYCRNCSGALVFW 139
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/31 (41%), Positives = 24/31 (77%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
KWL I+ +A ++V K+++GNKCD+ +++V
Sbjct: 145 KWLRNIEEHANEDVEKMILGNKCDMDDRRIV 175
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTI 331
SGVGK+C+L RF+DD + ++ISTI
Sbjct: 18 SGVGKTCILFRFSDDAFNTTFISTI 42
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 222 YDYLFKLLLIGTLELG 269
YDYLFKLLLIG +G
Sbjct: 6 YDYLFKLLLIGDSGVG 21
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 395 DTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKSG*RRLI 529
D GQ++ R + Y+ G+ G+I V DC D+D + +R+I
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRII 187
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 380 KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKSG*RRLIV 532
KL IWD GQ R+ +Y+ G+I V D DQ ++ K + L+V
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLV 53
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 383 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVK 508
+ +WDT G E + ++T ++Y + +++VY DS + VK
Sbjct: 1 IHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVK 42
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKI-RTVDLNGKTIKLQIWDTAGQERFRTITS 433
+GVGKS LL+RF + Y T+ + + + T+D + T L I DTA T
Sbjct: 136 AGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPAT--LHITDTAS-----TYEP 188
Query: 434 SYYRGAHGIIIVYDCTDQDSFSNVK 508
Y G I+VY + +F K
Sbjct: 189 VYLSQNEGFIVVYSINELRTFETAK 213
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 395 DTAGQERFRTITSSYYRGAHGIIIVYDCTDQDS 493
DTAG+E++ ++S Y RGA I+ YD T + S
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESS 310
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 36.7 bits (81), Expect = 0.016
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 496 QQREKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
++ + W+ I+ +A +V K+++GNKCD+ ++ V
Sbjct: 101 EKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQV 135
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F + E Y TI DF + TAG E+F ++ Y
Sbjct: 13 GVGKSALTVQFVTGQFVEKYDPTIE-DF----------------YHTAGTEQFASMRDLY 55
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
+ G ++VY ++ +F+++K
Sbjct: 56 IKNGQGFLLVYSLINRQTFADLK 78
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L +RF + Y T+ ++ + ++ G+ + +++ DTAG+ +
Sbjct: 871 GVGKSALTVRFLTKRFIGEYDDTLESTYR-QDAEVAGEVVAIELTDTAGENSPAKLERCL 929
Query: 440 YRGAHGIIIVYDCTDQDSF 496
G +++Y T + SF
Sbjct: 930 EIG-EVFVVLYSITSRHSF 947
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 35.5 bits (78), Expect = 0.038
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 332 GVDFKIRTVDLNGKT-IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV 505
GV + + GK K I DTAGQE + + Y R G + V+ + SF ++
Sbjct: 261 GVGHRAHSYSKGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDI 319
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 35.1 bits (77), Expect = 0.050
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 SGVGKSCLLLR--FADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTIT 430
S VGK+CLLL+ + +T + ++ +I ++ + + ++GK KL++ D + T
Sbjct: 27 STVGKTCLLLQLCYKSNTMSRKHLESISNNY-VANIIVDGKVYKLELCDV---DNLDTKI 82
Query: 431 SSYYRGAHGIIIVYDCTDQDSFSNVKS 511
S + + + D DSF +V++
Sbjct: 83 SKPFSDTDVFCLCFSVGDMDSFRHVEN 109
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 34.7 bits (76), Expect = 0.066
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVD-FKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
GK+ +L R + + E Y++T+ F + T+ K I+ ++WD G+E+ R + +Y
Sbjct: 33 GKTSILYR---NKFRE-YVNTVPTTAFNVETIR-PFKGIRFKVWDIGGREQNRPLWKAYA 87
Query: 443 RGAHGIIIVYDCT 481
R +I V D T
Sbjct: 88 RQTDAVIYVVDST 100
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 34.3 bits (75), Expect = 0.087
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDLTTKKVVD 603
+WL+ I+ A NV K+L+GNK D ++V+D
Sbjct: 22 QWLQNIEDNASPNVCKVLLGNKLDAEDERVID 53
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFR 421
GVGKS L +RF + Y T+ + + ++ + + L I DTAG+ R R
Sbjct: 26 GVGKSALTVRFLTRRFIGEYDQTLESTHR-HILQIDNEDVSLDISDTAGEVRVR 78
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/83 (24%), Positives = 38/83 (45%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS + +R+ + +TE +D GK +++ DTAGQE + + S
Sbjct: 2608 GVGKSSVTIRYLKNEFTE--------------IDYCGKLYDIEVVDTAGQEEYTSFRDSS 2653
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
++++ S++ +K
Sbjct: 2654 LATGDAFLVLFAINSASSWNELK 2676
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 33.1 bits (72), Expect = 0.20
Identities = 11/52 (21%), Positives = 29/52 (55%)
Frame = +2
Query: 356 VDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKS 511
+++ + L +WDT G + + Y+G+ I++ +D +++ +F ++S
Sbjct: 45 LEVGSQKFLLDLWDTEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIES 96
>SB_58754| Best HMM Match : PucR (HMM E-Value=5.5)
Length = 232
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 624 HIAYCTKVDNLFSGQVTLVTDEQFVHIVTSVTINL 520
HI+ T + N + +TL D +F+HI T+VTI L
Sbjct: 122 HISTTTSLHNANTITITLELDRRFIHISTTVTITL 156
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 478 HRPGFIQQREKWLEEIDRYACDNVNKLLVGNKCDLTTKK 594
HR F +WL E+D ++ V ++LVGNK DL K+
Sbjct: 90 HRASFENVALRWLPELDHFS-PGVPRVLVGNKKDLRPKQ 127
>SB_18664| Best HMM Match : PucR (HMM E-Value=5.5)
Length = 232
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 624 HIAYCTKVDNLFSGQVTLVTDEQFVHIVTSVTINL 520
HI+ T + N + +TL D +F+HI T+VTI L
Sbjct: 122 HISTTTSLHNANTITITLELDRRFIHISTTVTITL 156
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 496 QQREKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
QQ KW++++ ++V +LVGNK DL+ K+ V
Sbjct: 15 QQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQV 49
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
E+WL+E+ +A N+ +LVGNK DL + V
Sbjct: 25 ERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 56
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G ++VYD ++ NV+
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVE 25
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
+GVGK+ ++ RF ++E Y T+ D + ++ NG + L D++G +F +
Sbjct: 17 AGVGKTSIVKRFYCGKFSEEYEPTV-EDCYSKVLNKNGSIMVLNTTDSSGSYQFPAMREV 75
Query: 437 YYRGAHG 457
+ A G
Sbjct: 76 AIKRASG 82
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 520 EIDRYACDNVNKLLVGNKCDLTTKKVVDF 606
++ Y+ N +LVGNKCD+ ++VV +
Sbjct: 4 QVKTYSWANAQVILVGNKCDMEEERVVSY 32
>SB_44233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 550 SHCHKRNDQSPLTTFHVAE*ILVCAIIYNDDSMCSS 443
SHCHKR ++S + T HV I CA++ S C S
Sbjct: 83 SHCHKRLNESIIATHHVMCHI-DCAMLCTSHSRCLS 117
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 377 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVK 508
++ +D G + R I Y+ +GI+ + DC D + + K
Sbjct: 20 MRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESK 63
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 332 GVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
G F + TV+ +++K IWD G ++ R + YY
Sbjct: 220 GAGFNVETVE--HRSLKFTIWDVGGLQKLRPLWRHYY 254
>SB_58695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 84 PRPPNSCSPGEP 49
PRP NSCSPG+P
Sbjct: 24 PRPSNSCSPGDP 35
>SB_38625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 117 AKKKLILRRMDPRPPNSCSPGEP 49
AKK+++ + P NSCSPG+P
Sbjct: 33 AKKRVLSAVFETVPSNSCSPGDP 55
>SB_3006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 84 PRPPNSCSPGEP 49
P+P NSCSPG+P
Sbjct: 12 PKPSNSCSPGDP 23
>SB_47450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 332 GVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
G+ IRT D+ L++ D G+ER T+ S +R
Sbjct: 39 GLHLNIRTADIVNLRTMLELLDVEGEERHVTLPYSIHR 76
>SB_32003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 111 KKLILRRMDPRPPNSCSPGEP 49
++L ++ D R NSCSPG+P
Sbjct: 1 ERLSYKQTDDRTSNSCSPGDP 21
>SB_39220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 484 PGFIQQREKWLEEIDRYACDNV 549
PGF+Q+R+KW + D A V
Sbjct: 200 PGFVQERDKWKDHPDTLALAQV 221
>SB_20457| Best HMM Match : fn3 (HMM E-Value=5.1e-12)
Length = 1114
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1
Query: 579 VTLVTDEQFVHIVTSVTINLL*PLFTLLNESWS 481
+T TD+ + V SV+INL+ P + LN SWS
Sbjct: 418 ITASTDKDDMRSVLSVSINLISP--SALNVSWS 448
>SB_14086| Best HMM Match : POR (HMM E-Value=7.7)
Length = 292
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 84 PRPPNSCSPGEP 49
P P NSCSPG+P
Sbjct: 166 PEPSNSCSPGDP 177
>SB_38097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1099
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 332 GVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAH 454
G+ IRT D+ L++ D G+ER T+ + R H
Sbjct: 1024 GLHLNIRTADIVNLGTMLELLDIEGEERHVTLPYTIRRNVH 1064
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 511 WLEEIDRYACDNVNKLLVGNKCDL 582
WLE I + LLVGNKCD+
Sbjct: 77 WLESIRKNKLQYEEILLVGNKCDV 100
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 556 LLVGNKCDLTTKKVVDFSTVSNMRNNWA 639
+LVGNKCDL ++VV N+ +A
Sbjct: 2 VLVGNKCDLEDERVVGKDQGQNLAKQFA 29
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,280,374
Number of Sequences: 59808
Number of extensions: 382209
Number of successful extensions: 1869
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 1731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1852
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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