Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0093
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 167 4e-42
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 146 2e-35
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 140 8e-34
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 140 8e-34
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 140 8e-34
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 131 5e-31
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 131 5e-31
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 116 1e-26
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 116 1e-26
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 116 1e-26
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 116 1e-26
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 116 1e-26
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 111 5e-25
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 108 3e-24
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 108 3e-24
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 105 2e-23
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 103 8e-23
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 102 2e-22
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 99 1e-21
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 99 2e-21
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 99 3e-21
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 99 3e-21
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 98 4e-21
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 92 4e-19
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 91 5e-19
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 91 6e-19
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 91 6e-19
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 90 1e-18
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 90 1e-18
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 87 1e-17
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 86 2e-17
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 85 4e-17
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 84 7e-17
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 83 1e-16
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 81 7e-16
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 73 1e-13
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 73 1e-13
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 68 5e-12
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 66 2e-11
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 64 8e-11
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 63 1e-10
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 61 8e-10
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 61 8e-10
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 61 8e-10
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 61 8e-10
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 60 1e-09
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 60 2e-09
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 59 3e-09
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 58 4e-09
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 58 5e-09
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 58 5e-09
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 58 5e-09
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 58 5e-09
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 54 7e-08
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 54 7e-08
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 54 9e-08
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 52 4e-07
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 52 4e-07
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 52 4e-07
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 52 4e-07
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 52 4e-07
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 52 4e-07
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 52 4e-07
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 51 8e-07
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 50 1e-06
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 49 3e-06
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 48 6e-06
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 48 6e-06
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 48 8e-06
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 48 8e-06
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 46 2e-05
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 45 4e-05
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 44 1e-04
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 43 2e-04
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 43 2e-04
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 40 0.001
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 40 0.002
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 40 0.002
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 38 0.005
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 38 0.006
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 38 0.006
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 35 0.043
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 35 0.043
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 35 0.057
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 34 0.076
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 28 0.11
Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical p... 33 0.13
Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 33 0.13
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 33 0.13
U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6... 32 0.40
AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threon... 32 0.40
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 30 1.2
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL117199-2|CAB55041.1| 189|Caenorhabditis elegans Hypothetical ... 28 6.6
AL117199-1|CAB55038.1| 189|Caenorhabditis elegans Hypothetical ... 28 6.6
AC024749-2|AAF60435.2| 444|Caenorhabditis elegans Hypothetical ... 27 8.7
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 167 bits (407), Expect = 4e-42
Identities = 76/84 (90%), Positives = 83/84 (98%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGKSCLLLRFADDTYTESYISTIGVDFKIRT++L+GKTIKLQIWDTAGQERFRTITSS
Sbjct: 20 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSS 79
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGAHGII+VYD TDQ++F+NVK
Sbjct: 80 YYRGAHGIIVVYDITDQETFNNVK 103
Score = 63.7 bits (148), Expect = 1e-10
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVVD 603
++WL+EIDRYAC+NVNKLLVGNKCDLT K+ V+
Sbjct: 103 KQWLQEIDRYACENVNKLLVGNKCDLTAKRAVE 135
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 216 PEYDYLFKLLLIGTLELG 269
PEYDYLFKLLLIG +G
Sbjct: 6 PEYDYLFKLLLIGDSGVG 23
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 146 bits (353), Expect = 2e-35
Identities = 63/84 (75%), Positives = 78/84 (92%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGKS LLLRFAD+T++E+YI+TIGVDFKIRT+D+NG+ +KLQIWDTAGQERFRTITS+
Sbjct: 19 SGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITST 78
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRG HG+++VYD T+ +SF NVK
Sbjct: 79 YYRGTHGVVVVYDVTNGESFGNVK 102
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFSTVSN 621
++WL+EI+ CD+V K+LVGNKC+ ++VV S N
Sbjct: 102 KRWLQEIENN-CDSVQKVLVGNKCEENERRVVLESDARN 139
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 140 bits (339), Expect = 8e-34
Identities = 61/90 (67%), Positives = 79/90 (87%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGK+C+L RF+DD++ S+ISTIG+DFKIRT++L+GK IKLQIWDTAGQERFRTIT++
Sbjct: 17 SGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVKSG*RRL 526
YYRGA GII+VYD T++ SF N+K+ R +
Sbjct: 77 YYRGAMGIILVYDITNERSFENIKNWIRNI 106
Score = 30.7 bits (66), Expect = 0.93
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKC 576
+ W+ I+ +A +V ++++GNKC
Sbjct: 100 KNWIRNIEEHAASDVERMIIGNKC 123
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 222 YDYLFKLLLIGTLELG 269
YDYLFKLLLIG +G
Sbjct: 5 YDYLFKLLLIGDSGVG 20
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 140 bits (339), Expect = 8e-34
Identities = 61/90 (67%), Positives = 79/90 (87%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGK+C+L RF+DD++ S+ISTIG+DFKIRT++L+GK IKLQIWDTAGQERFRTIT++
Sbjct: 17 SGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVKSG*RRL 526
YYRGA GII+VYD T++ SF N+K+ R +
Sbjct: 77 YYRGAMGIILVYDITNERSFENIKNWIRNI 106
Score = 35.5 bits (78), Expect = 0.033
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
+ W+ I+ +A +V ++++GNKCD+ ++ V
Sbjct: 100 KNWIRNIEEHAASDVERMIIGNKCDIEERREV 131
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 222 YDYLFKLLLIGTLELG 269
YDYLFKLLLIG +G
Sbjct: 5 YDYLFKLLLIGDSGVG 20
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 140 bits (339), Expect = 8e-34
Identities = 61/90 (67%), Positives = 79/90 (87%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGK+C+L RF+DD++ S+ISTIG+DFKIRT++L+GK IKLQIWDTAGQERFRTIT++
Sbjct: 17 SGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTA 76
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVKSG*RRL 526
YYRGA GII+VYD T++ SF N+K+ R +
Sbjct: 77 YYRGAMGIILVYDITNERSFENIKNWIRNI 106
Score = 35.5 bits (78), Expect = 0.033
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
+ W+ I+ +A +V ++++GNKCD+ ++ V
Sbjct: 100 KNWIRNIEEHAASDVERMIIGNKCDIEERREV 131
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 222 YDYLFKLLLIGTLELG 269
YDYLFKLLLIG +G
Sbjct: 5 YDYLFKLLLIGDSGVG 20
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 131 bits (316), Expect = 5e-31
Identities = 56/83 (67%), Positives = 71/83 (85%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTAGQERF TIT+S
Sbjct: 18 SGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTS 77
Query: 437 YYRGAHGIIIVYDCTDQDSFSNV 505
YYRGA GI++VYD T+ SF N+
Sbjct: 78 YYRGAMGIMLVYDITNAKSFDNI 100
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
KWL ID +A ++V K+++GNKCD++ ++VV
Sbjct: 102 KWLRNIDEHASEDVVKMILGNKCDMSDRRVV 132
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 131 bits (316), Expect = 5e-31
Identities = 56/83 (67%), Positives = 71/83 (85%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTAGQERF TIT+S
Sbjct: 18 SGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTS 77
Query: 437 YYRGAHGIIIVYDCTDQDSFSNV 505
YYRGA GI++VYD T+ SF N+
Sbjct: 78 YYRGAMGIMLVYDITNAKSFDNI 100
Score = 34.3 bits (75), Expect = 0.076
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKC 576
KWL ID +A ++V K+++GNKC
Sbjct: 102 KWLRNIDEHASEDVVKMILGNKC 124
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 116 bits (280), Expect = 1e-26
Identities = 47/84 (55%), Positives = 70/84 (83%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
S VGK+ L R+ DD++T +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++
Sbjct: 31 SSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTA 90
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G I++YD T+++SF++V+
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQ 114
Score = 36.3 bits (80), Expect = 0.019
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
+ W +I Y+ +N +LVGNKCD+ +++VV
Sbjct: 114 QDWCTQIKTYSWENAQVVLVGNKCDMDSERVV 145
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 116 bits (280), Expect = 1e-26
Identities = 47/84 (55%), Positives = 70/84 (83%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
S VGK+ L R+ DD++T +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++
Sbjct: 31 SSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTA 90
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G I++YD T+++SF++V+
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQ 114
Score = 36.3 bits (80), Expect = 0.019
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
+ W +I Y+ +N +LVGNKCD+ +++VV
Sbjct: 114 QDWCTQIKTYSWENAQVVLVGNKCDMDSERVV 145
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 116 bits (280), Expect = 1e-26
Identities = 47/84 (55%), Positives = 70/84 (83%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
S VGK+ L R+ DD++T +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++
Sbjct: 31 SSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTA 90
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G I++YD T+++SF++V+
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQ 114
Score = 36.3 bits (80), Expect = 0.019
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
+ W +I Y+ +N +LVGNKCD+ +++VV
Sbjct: 114 QDWCTQIKTYSWENAQVVLVGNKCDMDSERVV 145
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 116 bits (280), Expect = 1e-26
Identities = 47/84 (55%), Positives = 70/84 (83%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
S VGK+ L R+ DD++T +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++
Sbjct: 45 SSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTA 104
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G I++YD T+++SF++V+
Sbjct: 105 YYRGAMGFILMYDITNEESFNSVQ 128
Score = 36.3 bits (80), Expect = 0.019
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
+ W +I Y+ +N +LVGNKCD+ +++VV
Sbjct: 128 QDWCTQIKTYSWENAQVVLVGNKCDMDSERVV 159
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 116 bits (280), Expect = 1e-26
Identities = 47/84 (55%), Positives = 70/84 (83%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
S VGK+ L R+ DD++T +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++
Sbjct: 31 SSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTA 90
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G I++YD T+++SF++V+
Sbjct: 91 YYRGAMGFILMYDITNEESFNSVQ 114
Score = 36.3 bits (80), Expect = 0.019
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
+ W +I Y+ +N +LVGNKCD+ +++VV
Sbjct: 114 QDWCTQIKTYSWENAQVVLVGNKCDMDSERVV 145
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 111 bits (266), Expect = 5e-25
Identities = 48/83 (57%), Positives = 62/83 (74%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGKS L+LRF DD + +TIGVDF++ ++ ++G +KL IWDTAGQERFRT+T S
Sbjct: 20 SGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPS 79
Query: 437 YYRGAHGIIIVYDCTDQDSFSNV 505
YYRGA G+I VYD T + SF +
Sbjct: 80 YYRGAQGVICVYDVTSRSSFEKL 102
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 108 bits (260), Expect = 3e-24
Identities = 50/85 (58%), Positives = 65/85 (76%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
+GVGKSCLLL+F D + + TIGV+F R V ++GK IKLQIWDTAGQE FR+IT S
Sbjct: 15 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRS 74
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVKS 511
YYRGA G ++VYD T +D+F+++ S
Sbjct: 75 YYRGAAGALLVYDITRRDTFNHLTS 99
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 511 WLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
WLE+ +++ N+ +L+GNK DL ++ V
Sbjct: 100 WLEDARQHSNSNMVIMLIGNKSDLEARREV 129
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 108 bits (260), Expect = 3e-24
Identities = 44/81 (54%), Positives = 65/81 (80%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GKSC+LLRFA++++ +IST+GVDFK++T+ L I+L++WDTAG ER+RTI +SYY
Sbjct: 18 GKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGMERYRTIYNSYYH 77
Query: 446 GAHGIIIVYDCTDQDSFSNVK 508
AHG++ VYD T++ SF N++
Sbjct: 78 SAHGVMCVYDMTNEKSFENLE 98
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 511 WLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFSTVSNM 624
WL+EI ++A N +LVGNK D+ ++ VDF +
Sbjct: 101 WLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDRAEKL 138
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 105 bits (253), Expect = 2e-23
Identities = 45/83 (54%), Positives = 65/83 (78%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGK+C++ RF + T+ + +TIGVDF ++T+ ++GK +KLQIWDT GQERFRTIT SY
Sbjct: 20 GVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQERFRTITQSY 79
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
YR A+GI++ YD T + SF +++
Sbjct: 80 YRSANGIVLCYDITCKQSFGSLQ 102
Score = 40.7 bits (91), Expect = 9e-04
Identities = 12/33 (36%), Positives = 25/33 (75%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVVD 603
++W++++ ++A NV KLL+G KCDL ++ ++
Sbjct: 102 QRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIE 134
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 103 bits (248), Expect = 8e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAG 406
SGVGKSCLLLRFADDTYTESYISTIGVDFKIRT++L+GKTIKLQIWDTAG
Sbjct: 20 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 216 PEYDYLFKLLLIGTLELG 269
PEYDYLFKLLLIG +G
Sbjct: 6 PEYDYLFKLLLIGDSGVG 23
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 102 bits (245), Expect = 2e-22
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
+GVGK+CL+ +F + +TIGVDF I+TV + IKLQIWDTAGQERFR+IT S
Sbjct: 16 AGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQS 75
Query: 437 YYRGAHGIIIVYDCTDQDSF 496
YYR AH I++VYD + Q SF
Sbjct: 76 YYRSAHAIVLVYDVSCQPSF 95
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 508 KWLEEIDRYACDNVNKLLVGNKCD 579
+WL EI+ YA V K+LVGNK D
Sbjct: 100 EWLGEIESYANRRVLKILVGNKVD 123
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 100 bits (239), Expect = 1e-21
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKSCLL +F + + TIGV+F R ++++G+ IKLQIWDTAGQERFR +T SY
Sbjct: 21 GVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSY 80
Query: 440 YRGAHGIIIVYDCTDQDSFSNVKS 511
YRGA G ++VYD T + +++++ S
Sbjct: 81 YRGAAGALMVYDITRRSTYNHLSS 104
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 99 bits (238), Expect = 1e-21
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGKS LL RF + + STIGV+F R++ + GKT+K QIWDTAGQER+R ITS+
Sbjct: 20 SGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSA 79
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G ++VYD ++ NV+
Sbjct: 80 YYRGAVGALLVYDIAKHVTYENVE 103
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV--DFSTVSNMRNNWAF 642
E+WL+E+ +A N+ +LVGNK DL + V D + + RN +F
Sbjct: 103 ERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAERNQLSF 150
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 219 EYDYLFKLLLIGTLELG 269
EYDYLFK++LIG +G
Sbjct: 7 EYDYLFKVVLIGDSGVG 23
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGKS LL RF + + STIGV+F R++ + GKT+K QIWDTAGQER+R ITS+
Sbjct: 20 SGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSA 79
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
YYRGA G ++VYD ++ NV+
Sbjct: 80 YYRGAVGALLVYDIAKHVTYENVE 103
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCD 579
E+WL+E+ +A N+ + VGNKCD
Sbjct: 103 ERWLKELRDHADQNIVIMPVGNKCD 127
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 219 EYDYLFKLLLIGTLELG 269
EYDYLFK++LIG +G
Sbjct: 7 EYDYLFKVVLIGDSGVG 23
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 98.7 bits (235), Expect = 3e-21
Identities = 40/86 (46%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTY-TESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITS 433
S GK+CLL+R+ D + ++IST+G+D++ + + + K +KLQIWDTAGQERFR++T+
Sbjct: 11 SCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTT 70
Query: 434 SYYRGAHGIIIVYDCTDQDSFSNVKS 511
SYYR A +++VYD ++ SF N ++
Sbjct: 71 SYYRDADALLLVYDIANRASFENCRN 96
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 511 WLEEIDRYACDNVNKLLVGNKCDL 582
WL +I Y + V LVGNKCDL
Sbjct: 97 WLSQIKEYGKEAVQVTLVGNKCDL 120
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 98.7 bits (235), Expect = 3e-21
Identities = 40/86 (46%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTY-TESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITS 433
S GK+CLL+R+ D + ++IST+G+D++ + + + K +KLQIWDTAGQERFR++T+
Sbjct: 11 SCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTT 70
Query: 434 SYYRGAHGIIIVYDCTDQDSFSNVKS 511
SYYR A +++VYD ++ SF N ++
Sbjct: 71 SYYRDADALLLVYDIANRASFENCRN 96
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 511 WLEEIDRYACDNVNKLLVGNKCDL 582
WL +I Y + V LVGNKCDL
Sbjct: 97 WLSQIKEYGKEAVQVTLVGNKCDL 120
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 98.3 bits (234), Expect = 4e-21
Identities = 41/75 (54%), Positives = 55/75 (73%)
Frame = +2
Query: 281 LLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 460
+LRF DD + +TIGVDF++ ++ ++G +KL IWDTAGQERFRT+T SYYRGA G+
Sbjct: 1 MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGV 60
Query: 461 IIVYDCTDQDSFSNV 505
I VYD T + SF +
Sbjct: 61 ICVYDVTSRSSFEKL 75
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 92.7 bits (220), Expect = 2e-19
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
S VGKS L+LRF + E STIG F +TV L+ TIK +IWDTAGQER+ ++
Sbjct: 28 SAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPM 87
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVKS 511
YYRGA I+VYD T+Q+SF K+
Sbjct: 88 YYRGAQAAIVVYDITNQESFQKAKN 112
Score = 36.3 bits (80), Expect = 0.019
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 496 QQREKWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDF 606
Q+ + W++E+ R A N+ L GNK D+ K+ V++
Sbjct: 108 QKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEY 144
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 91.9 bits (218), Expect = 4e-19
Identities = 39/86 (45%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLN-GKTIKLQIWDTAGQERFRTITS 433
S VGK+C L RF + + + +TIGVDF ++T+ + + I +Q+WDTAGQERFR+IT
Sbjct: 211 SAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQERFRSITK 270
Query: 434 SYYRGAHGIIIVYDCTDQDSFSNVKS 511
Y+R A G+++++D T + SF NV++
Sbjct: 271 QYFRKADGVVLMFDVTSEQSFLNVRN 296
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/83 (46%), Positives = 59/83 (71%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS LLLRF + + ST+G++F R ++++ K +KL +WDT GQERFR++ SY
Sbjct: 16 GVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSY 75
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
YR A G ++VYD T ++SF +++
Sbjct: 76 YRHAIGALLVYDITSRESFYHLE 98
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/93 (44%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLN---------GKTIKLQIWDTAGQ 409
SGVGK+ L R+ D+T+T +IST+G+DFK + V G+ + LQ+WDTAGQ
Sbjct: 16 SGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTAGQ 75
Query: 410 ERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVK 508
ERFR++T++++R A G I+++D T++ SF N++
Sbjct: 76 ERFRSLTTAFFRDAMGFILIFDITNEQSFLNIR 108
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/93 (44%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLN---------GKTIKLQIWDTAGQ 409
SGVGK+ L R+ D+T+T +IST+G+DFK + V G+ + LQ+WDTAGQ
Sbjct: 16 SGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTAGQ 75
Query: 410 ERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVK 508
ERFR++T++++R A G I+++D T++ SF N++
Sbjct: 76 ERFRSLTTAFFRDAMGFILIFDITNEQSFLNIR 108
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLN-GKTIKLQIWDTAGQERFRTITS 433
S VGKS LL F + E T+GVDF R ++L G +KLQ+WDTAGQE+FR+IT
Sbjct: 26 STVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQEKFRSITK 85
Query: 434 SYYRGAHGIIIVYDCTDQDSFSNVKS 511
SYYR + G++ +YD T+++SF +V++
Sbjct: 86 SYYRNSVGVLAIYDTTNRESFEHVEN 111
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 90.2 bits (214), Expect = 1e-18
Identities = 39/84 (46%), Positives = 58/84 (69%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
+ VGKS ++R +T ST+GVDF ++TV+++G+ + LQ+WDTAGQERFR++ S
Sbjct: 470 AAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKS 529
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVK 508
Y+R A G I+VYD + SF V+
Sbjct: 530 YFRRADGAILVYDVCAEQSFLRVR 553
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS LL RF + + TIGV+F + + + GK +K+QIWDTAG ERFR SSY
Sbjct: 18 GVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERFRCGASSY 77
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
YRGA G ++VYD + ++ +V+
Sbjct: 78 YRGALGALLVYDISKHKTYESVE 100
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFSTVSNMRNNWAF 642
E+WL+ + +A +++ LVGNK DL+ D + + RN+ +F
Sbjct: 100 EQWLKVLRDHANEDIVITLVGNKSDLSHAVPTDEAKIYAERNHISF 145
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/78 (47%), Positives = 57/78 (73%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+ L+ RF D++ +Y +TIG+DF +T+ L +T++LQ+WDTAGQERFR++ SY
Sbjct: 21 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 80
Query: 443 RGAHGIIIVYDCTDQDSF 496
R + ++VYD T+ +SF
Sbjct: 81 RDSTVAVVVYDITNSNSF 98
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 499 QREKWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 600
Q KW++++ +V +LVGNK DL+ K+ V
Sbjct: 100 QTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQV 133
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/78 (47%), Positives = 57/78 (73%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+ ++ RF D++ +Y +TIG+DF +T+ L +TI+LQ+WDTAGQERFR++ SY
Sbjct: 22 VGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 81
Query: 443 RGAHGIIIVYDCTDQDSF 496
R + ++VYD T+ +SF
Sbjct: 82 RDSSVAVVVYDITNANSF 99
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 499 QREKWLEEI-DRYACDNVNKLLVGNKCDLTTKKVV 600
Q KW++++ + CD V +LVGNK DL K+ V
Sbjct: 101 QTTKWVDDVRNERGCD-VIIVLVGNKTDLADKRQV 134
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 85.8 bits (203), Expect = 2e-17
Identities = 37/48 (77%), Positives = 46/48 (95%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDT 400
SGVGKS LLLRFAD+T++E+YI+TIGVDFKIRT+D+NG+ +KLQIWDT
Sbjct: 19 SGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDT 66
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 85.0 bits (201), Expect = 4e-17
Identities = 36/85 (42%), Positives = 60/85 (70%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
SGVGK+ L+ ++ + ++ Y +TIG DF R V+++ +T+ LQIWDTAGQERF+++ +
Sbjct: 18 SGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQSLGVA 77
Query: 437 YYRGAHGIIIVYDCTDQDSFSNVKS 511
+YRGA ++ +D T+ SF ++ S
Sbjct: 78 FYRGADCCVLAFDVTNAASFKSLDS 102
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 84.6 bits (200), Expect = 5e-17
Identities = 36/83 (43%), Positives = 58/83 (69%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGKS L+LRF ++ ++ ++STI F+ +TV++ L IWDTAGQE++ + YY
Sbjct: 23 VGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEKYHALGPIYY 82
Query: 443 RGAHGIIIVYDCTDQDSFSNVKS 511
RG++G+++V+D TD+ SF VK+
Sbjct: 83 RGSNGVLLVFDITDRKSFEKVKN 105
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 84.2 bits (199), Expect = 7e-17
Identities = 36/83 (43%), Positives = 58/83 (69%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS LLLRF D+ + + +T+GV+F + + ++ ++L++WDT GQE FR+I +Y
Sbjct: 16 GVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQENFRSIIRAY 75
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
YR A G ++VYD T + SF +++
Sbjct: 76 YRNALGALLVYDITCRKSFVHLE 98
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/79 (48%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLN-GKTIKLQIWDTAGQERFRTITS 433
SG GK+ LL F D+T+ ++TIG+DFK + V LN G++I+LQ+WDTAGQERFR +
Sbjct: 15 SGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQERFRQLAP 74
Query: 434 SYYRGAHGIIIVYDCTDQD 490
+Y R A ++V D +D++
Sbjct: 75 AYIRSARVALLVIDLSDEN 93
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 81.0 bits (191), Expect = 7e-16
Identities = 35/84 (41%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFR-TITS 433
+ VGK+CL RF + E +TIGVDF+ R+ + + +++Q+WDTAGQER+R +I +
Sbjct: 109 AAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERYRQSIVA 168
Query: 434 SYYRGAHGIIIVYDCTDQDSFSNV 505
YYR + ++ VYD T ++SF+++
Sbjct: 169 HYYRNVNAVVFVYDVTCRESFNDL 192
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = +1
Query: 511 WLEEIDRYAC---DNVNKLLVGNKCDL--TTKKVVDFSTVSNMRNNWA 639
W++E +++ V ++L+GNKCD+ T + D + + RNN A
Sbjct: 195 WIKECEKHGLVGDSEVPRILIGNKCDVECTNRVSTDEAQMFADRNNMA 242
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTI-KLQIWDTAGQERFRTITSS 436
GVGK+ ++ RF + ++ +Y +TIGVDF ++ + ++ T+ LQIWD +GQ+R+ +T
Sbjct: 21 GVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRV 80
Query: 437 YYRGAHGIIIVYDCT 481
YY+ AH IIV D T
Sbjct: 81 YYKDAHAAIIVLDST 95
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTI-KLQIWDTAGQERFRTITSS 436
GVGK+ ++ RF + ++ +Y +TIGVDF ++ + ++ T+ LQIWD +GQ+R+ +T
Sbjct: 21 GVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRV 80
Query: 437 YYRGAHGIIIVYDCT 481
YY+ AH IIV D T
Sbjct: 81 YYKDAHAAIIVLDST 95
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQE 412
+GVGKSCLLL+F D + + TIGV+F R V ++GK IKLQ+WDTAGQE
Sbjct: 15 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/84 (35%), Positives = 51/84 (60%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F T+ E Y TI DF + ++++G+ L+I DTAG E+F ++ Y
Sbjct: 13 GVGKSALTVQFVSSTFIEKYDPTIE-DFYRKEIEVDGQPSVLEILDTAGTEQFSSMRDLY 71
Query: 440 YRGAHGIIIVYDCTDQDSFSNVKS 511
+ G ++VY T Q +F ++++
Sbjct: 72 IKNGQGFVVVYSITSQQTFHDIRN 95
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 541 DNVNKLLVGNKCDLTTKKVVDFSTVSNMRNNWA 639
+NV LLVGNKCDL+ ++ V + +W+
Sbjct: 107 ENVPILLVGNKCDLSHQRQVRSEEGLALAESWS 139
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGK----TIKLQIWDTAGQERFRT 424
SGVGK+ ++ R + +TIG F V + + ++LQ+WDTAGQERFR
Sbjct: 61 SGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWDTAGQERFRC 120
Query: 425 ITSSYYRGAHGIIIVYDCTDQDSFSNVK 508
+ Y R A +IVYD TD+++F +V+
Sbjct: 121 MVPMYMRNADAALIVYDVTDRNTFEDVE 148
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 505 EKWLEEIDRYA-CDNVNKLLVGNKCDLTTKKVV 600
EKWL+++DR + ++ N L+GNK DL K+ V
Sbjct: 148 EKWLKDLDRSSGTEDANVYLIGNKTDLVEKREV 180
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 64.1 bits (149), Expect = 8e-11
Identities = 26/50 (52%), Positives = 40/50 (80%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQ 409
GVGK+C++ RF + T+ + +TIGVDF ++T+ ++GK +KLQIWDTAG+
Sbjct: 20 GVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTAGE 69
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/79 (40%), Positives = 44/79 (55%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L L+F D + E Y T ++ + V L+G+ + I DTAGQE + I +Y
Sbjct: 27 GVGKSALTLQFMYDEFVEEYEPTKADSYRKKVV-LDGEECSIDILDTAGQEDYSAIRDNY 85
Query: 440 YRGAHGIIIVYDCTDQDSF 496
YR G I V+ D +SF
Sbjct: 86 YRSGEGFICVFSILDMESF 104
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 60.9 bits (141), Expect = 8e-10
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F + + Y TI D + ++ KL+I DTAGQE F T+ Y
Sbjct: 27 GVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQY 85
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
R G +IV+ TD++SF VK
Sbjct: 86 LRTGSGFLIVFAVTDRNSFEEVK 108
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 60.9 bits (141), Expect = 8e-10
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F + + Y TI D + ++ KL+I DTAGQE F T+ Y
Sbjct: 27 GVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQY 85
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
R G +IV+ TD++SF VK
Sbjct: 86 LRTGSGFLIVFAVTDRNSFEEVK 108
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 60.9 bits (141), Expect = 8e-10
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F + + Y TI D + ++ KL+I DTAGQE F T+ Y
Sbjct: 27 GVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQY 85
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
R G +IV+ TD++SF VK
Sbjct: 86 LRTGSGFLIVFAVTDRNSFEEVK 108
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 60.9 bits (141), Expect = 8e-10
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F + + Y TI D + ++ KL+I DTAGQE F T+ Y
Sbjct: 27 GVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQY 85
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
R G +IV+ TD++SF VK
Sbjct: 86 LRTGSGFLIVFAVTDRNSFEEVK 108
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F + E Y TI ++ + V+++G+ L+I DTAG E+F + Y
Sbjct: 13 GVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLY 71
Query: 440 YRGAHGIIIVYDCTDQDSFSNV 505
+ G ++VY T Q +F+++
Sbjct: 72 MKNGQGFVLVYSITAQSTFNDL 93
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 541 DNVNKLLVGNKCDLTTKKVV 600
D V +LVGNKCDL ++VV
Sbjct: 107 DEVPMILVGNKCDLEDERVV 126
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/83 (32%), Positives = 49/83 (59%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L L++ + +Y +TI ++ + ++ + +L+I DTAG E+F + +Y
Sbjct: 13 GVGKSALTLQYVQGIFVHTYDATIEDSYR-KLSKVDAENARLEILDTAGTEQFTGMRETY 71
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
YR A G ++V+ + +F N+K
Sbjct: 72 YRTAQGFVLVFSLAETSTFENLK 94
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDL-NGKTIKLQIWDTAGQERFRTITSSYY 442
GK+ + RFA +++ +SY T+G+DF R + L + + +Q+WD GQ + Y
Sbjct: 47 GKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQSIAGEMIDKYL 106
Query: 443 RGAHGIIIVYDCTDQDSFSN 502
GA+ + +VYD T+ SF N
Sbjct: 107 TGANIVFLVYDVTNSKSFEN 126
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAG 406
GVGKSCLL +F + + TIGV+F R ++++G+ IKLQIWDTAG
Sbjct: 21 GVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F + + Y TI D I+ +++G + + + DTAGQE F + Y
Sbjct: 27 GVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQEEFSAMREQY 85
Query: 440 YRGAHGIIIVYDCTDQDSF 496
RG G ++V+ T++ SF
Sbjct: 86 IRGGRGFLLVFSVTERKSF 104
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++F + + Y TI D I+ +++G + + + DTAGQE F + Y
Sbjct: 27 GVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQEEFSAMREQY 85
Query: 440 YRGAHGIIIVYDCTDQDSF 496
RG G ++V+ T++ SF
Sbjct: 86 IRGGRGFLLVFSVTERKSF 104
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/89 (31%), Positives = 46/89 (51%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
G GK+ + R + + Y++T+GV+ N I+ +WDTAGQE+F + Y
Sbjct: 19 GTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGY 78
Query: 440 YRGAHGIIIVYDCTDQDSFSNVKSG*RRL 526
Y II++D T + ++ NV + R L
Sbjct: 79 YIQGQCAIIMFDVTARVTYKNVPNWHRDL 107
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++ + + E Y TI ++ + V ++G+T L I DTAGQE + + Y
Sbjct: 13 GVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQY 71
Query: 440 YRGAHGIIIVYDCTDQDSFSNV 505
R G ++V+ + SF NV
Sbjct: 72 MRTGEGFLLVFAVNEAKSFENV 93
Score = 33.9 bits (74), Expect = 0.100
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 541 DNVNKLLVGNKCDLTTKKVVDFSTVS 618
D+V +LVGNKCDL+++ VDF TVS
Sbjct: 107 DDVPMVLVGNKCDLSSRS-VDFRTVS 131
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
GVGKS L ++ + + E Y TI ++ + V ++G+T L I DTAGQE + + Y
Sbjct: 16 GVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQY 74
Query: 440 YRGAHGIIIVYDCTDQDSFSNV 505
R G ++V+ + SF NV
Sbjct: 75 MRTGEGFLLVFAVNEAKSFENV 96
Score = 33.9 bits (74), Expect = 0.100
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 541 DNVNKLLVGNKCDLTTKKVVDFSTVS 618
D+V +LVGNKCDL+++ VDF TVS
Sbjct: 110 DDVPMVLVGNKCDLSSRS-VDFRTVS 134
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 58.0 bits (134), Expect = 5e-09
Identities = 24/80 (30%), Positives = 47/80 (58%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GK+CLL+ F+ D + + Y+ T+ ++ + ++++GK ++L +WDTAGQE + + Y
Sbjct: 17 GKTCLLIVFSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYP 75
Query: 446 GAHGIIIVYDCTDQDSFSNV 505
I++ + DS N+
Sbjct: 76 DTDVILMCFSIDSPDSLENI 95
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDL 582
EKW E+ R+ C NV +LVGNK DL
Sbjct: 97 EKWTPEV-RHFCPNVPIILVGNKRDL 121
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 58.0 bits (134), Expect = 5e-09
Identities = 24/80 (30%), Positives = 47/80 (58%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GK+CLL+ F+ D + + Y+ T+ ++ + ++++GK ++L +WDTAGQE + + Y
Sbjct: 17 GKTCLLIVFSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYP 75
Query: 446 GAHGIIIVYDCTDQDSFSNV 505
I++ + DS N+
Sbjct: 76 DTDVILMCFSIDSPDSLENI 95
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 505 EKWLEEIDRYACDNVNKLLVGNKCDL 582
EKW E+ R+ C NV +LVGNK DL
Sbjct: 97 EKWTPEV-RHFCPNVPIILVGNKRDL 121
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 54.8 bits (126), Expect = 5e-08
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSS 436
+ VGK+ +++ + + Y +Y+ T +F + V ++ K I+LQ+ DTAGQ F T+
Sbjct: 18 AAVGKTSMIVSYTTNVYPHNYVPTAFDNFSV-VVLVDKKPIRLQLHDTAGQSSFDTLRPL 76
Query: 437 YYRGAHGIIIVYDCTDQDSFSNV 505
Y A +IVY D SF +V
Sbjct: 77 CYTDADVFVIVYSVVDLQSFEDV 99
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/83 (30%), Positives = 44/83 (53%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+C+L+ + D++ Y+ T+ ++ + + L+G + L +WDTAGQE + + Y
Sbjct: 18 VGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQEDYDRLRPLSY 76
Query: 443 RGAHGIIIVYDCTDQDSFSNVKS 511
I+ + SF NV S
Sbjct: 77 PQTDVFILCFSVVSPVSFDNVAS 99
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/83 (30%), Positives = 44/83 (53%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+C+L+ + D++ Y+ T+ ++ + + L+G + L +WDTAGQE + + Y
Sbjct: 18 VGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQEDYDRLRPLSY 76
Query: 443 RGAHGIIIVYDCTDQDSFSNVKS 511
I+ + SF NV S
Sbjct: 77 PQTDVFILCFSVVSPVSFDNVAS 99
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/47 (46%), Positives = 35/47 (74%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTA 403
VGK+ L+ RF D++ +Y +TIG+DF +T+ L +T++LQ+WDTA
Sbjct: 21 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWDTA 67
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GK+ + A +TE I T+G F +R + TIKL WD GQ RFR++ Y R
Sbjct: 32 GKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGNVTIKL--WDIGGQPRFRSMWERYCR 87
Query: 446 GAHGIIIVYDCTDQD 490
G + I+ + D D++
Sbjct: 88 GVNAIVFMVDAADEE 102
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/83 (28%), Positives = 45/83 (54%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLL+ + + + YI T+ ++ + ++G+ I L +WDTAGQE + + Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDYDRLRPLSY 72
Query: 443 RGAHGIIIVYDCTDQDSFSNVKS 511
++ + + SF NV++
Sbjct: 73 PQTDVFLVCFALNNPASFENVRA 95
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/83 (28%), Positives = 45/83 (54%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLL+ + + + YI T+ ++ + ++G+ I L +WDTAGQE + + Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDYDRLRPLSY 72
Query: 443 RGAHGIIIVYDCTDQDSFSNVKS 511
++ + + SF NV++
Sbjct: 73 PQTDVFLVCFALNNPASFENVRA 95
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/83 (28%), Positives = 45/83 (54%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLL+ + + + YI T+ ++ + ++G+ I L +WDTAGQE + + Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDYDRLRPLSY 72
Query: 443 RGAHGIIIVYDCTDQDSFSNVKS 511
++ + + SF NV++
Sbjct: 73 PQTDVFLVCFALNNPASFENVRA 95
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/83 (28%), Positives = 45/83 (54%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLL+ + + + YI T+ ++ + ++G+ I L +WDTAGQE + + Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDYDRLRPLSY 72
Query: 443 RGAHGIIIVYDCTDQDSFSNVKS 511
++ + + SF NV++
Sbjct: 73 PQTDVFLVCFALNNPASFENVRA 95
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/83 (28%), Positives = 45/83 (54%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLL+ + + + YI T+ ++ + ++G+ I L +WDTAGQE + + Y
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDYDRLRPLSY 72
Query: 443 RGAHGIIIVYDCTDQDSFSNVKS 511
++ + + SF NV++
Sbjct: 73 PQTDVFLVCFALNNPASFENVRA 95
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GK+ + A +TE I T+G F +R + TIKL WD GQ RFR++ Y R
Sbjct: 32 GKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGNVTIKL--WDIGGQPRFRSMWERYCR 87
Query: 446 GAHGIIIVYDCTDQD 490
G + I+ + D D++
Sbjct: 88 GVNAIVFMVDAADEE 102
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDL---------NGKTIKLQIWDTAG 406
GVGK+ L R+ D+T+T +IST+G+DFK + V G+ + LQIWDTAG
Sbjct: 17 GVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQRVLLQIWDTAG 74
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/83 (30%), Positives = 43/83 (51%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLLL + + + YI T+ D V ++G+ I L +WDTAGQ+ + +
Sbjct: 14 VGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSF 72
Query: 443 RGAHGIIIVYDCTDQDSFSNVKS 511
++ + + SF NV++
Sbjct: 73 PQTDVFLVCFALNNPASFENVRA 95
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/83 (30%), Positives = 43/83 (51%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLLL + + + YI T+ D V ++G+ I L +WDTAGQ+ + +
Sbjct: 14 VGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSF 72
Query: 443 RGAHGIIIVYDCTDQDSFSNVKS 511
++ + + SF NV++
Sbjct: 73 PQTDVFLVCFALNNPASFENVRA 95
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +2
Query: 254 YSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITS 433
Y VGKS L+LRF + + E Y STI D + + + L++ DTAGQ+ +
Sbjct: 21 YPHVGKSALVLRFTQNIFPERYESTI-EDQHSKHIAAFHRDYHLRVTDTAGQQEYTVFPR 79
Query: 434 SYYRGAHGIIIVYDCTDQDSF 496
S +G I+VY D+ SF
Sbjct: 80 SCSLDINGFILVYAIDDRKSF 100
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIW 394
VGK+ ++ RF D++ +Y +TIG+DF +T+ L +TI+LQIW
Sbjct: 22 VGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/39 (48%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = +2
Query: 392 WDTAGQERFR-TITSSYYRGAHGIIIVYDCTDQDSFSNV 505
WDTAGQER+R +I + YYR + ++ VYD T ++SF+++
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDL 39
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +2
Query: 320 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFS 499
I T+G F + TV K IK +WD GQ++ R + YY G +I V D D+D
Sbjct: 42 IPTVG--FNVETVTY--KNIKFNVWDVGGQDKIRPLWRHYYTGTQALIFVMDAADRDRVD 97
Query: 500 NVKSG*RRLI 529
+ R+I
Sbjct: 98 EARMELHRII 107
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLL+ + + + Y+ T+ ++ + TV + G+ L ++DTAGQE + + Y
Sbjct: 14 VGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDYDRLRPLSY 72
Query: 443 RGAHGIIIVYDCTDQDSFSNVK 508
++ + SF NV+
Sbjct: 73 PQTDVFLVCFSVVAPASFENVR 94
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLL+ + + + Y+ T+ ++ + TV + G+ L ++DTAGQE + + Y
Sbjct: 11 VGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDYDRLRPLSY 69
Query: 443 RGAHGIIIVYDCTDQDSFSNVK 508
++ + SF NV+
Sbjct: 70 PQTDVFLVCFSVVAPASFENVR 91
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
VGK+CLL+ + + + Y+ T+ ++ + T + G+ L ++DTAGQE + + Y
Sbjct: 14 VGKTCLLISYTTNKFPSEYVPTVFDNYAV-TAMIGGEPYTLGLFDTAGQEDYDRLRPLSY 72
Query: 443 RGAHGIIIVYDCTDQDSFSNVK 508
++ + SF NV+
Sbjct: 73 PQTDVFLVCFSVVAPASFENVR 94
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERF 418
VGK+CLL+ + + + YI T+ ++ + ++G+ I L +WDTAGQE +
Sbjct: 14 VGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDY 64
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/75 (32%), Positives = 42/75 (56%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GK+ L+ +F D+ T++ T+G D I+TV K +L +WD GQ+ R+ +Y+
Sbjct: 28 GKTTLMKKFLDEP-TDTIEPTLGFD--IKTVHF--KDFQLNLWDVGGQKSLRSYWKNYFE 82
Query: 446 GAHGIIIVYDCTDQD 490
+I V D +D++
Sbjct: 83 STDALIWVVDSSDRE 97
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/77 (35%), Positives = 35/77 (45%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
G GK+ +L R + I TIG F + V+ K +K Q+WD GQ R Y
Sbjct: 26 GAGKTTILYRLQVGEVVTT-IPTIG--FNVEQVEY--KNLKFQVWDLGGQTSIRPYWRCY 80
Query: 440 YRGAHGIIIVYDCTDQD 490
Y II V D D+D
Sbjct: 81 YANTDAIIYVVDSADRD 97
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2
Query: 320 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFS 499
I TIG F + TV+ K I +WD GQ++ R + Y++ G+I V D D++
Sbjct: 46 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVG 101
Query: 500 NVKSG*RRLI 529
+ R++
Sbjct: 102 EAREELMRML 111
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 320 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQD 490
I TIG F + TV+ K I +WD GQ++ R + Y++ G+I V D D++
Sbjct: 46 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKE 98
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 320 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQD 490
I TIG F + TV+ K I +WD GQ++ R + Y++ G+I V D D++
Sbjct: 46 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKE 98
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2
Query: 341 FKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV 505
F ++TV G I+L +WD GQ R S+YY +I V D D+ F +
Sbjct: 51 FNVKTVAAMGD-IRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEM 104
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +2
Query: 326 TIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV 505
T V V+LN L WD GQE R + ++YY A+ +I V D T D F V
Sbjct: 54 TATVGLNTGNVELNNTC--LHFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIV 111
Query: 506 KS 511
S
Sbjct: 112 AS 113
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/100 (22%), Positives = 54/100 (54%)
Frame = +2
Query: 212 ESRIRLFIQTTPDWYSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQI 391
E++++L + D Y+G K+ LL+ + + ++Y +T+ ++ + +V ++ K + +
Sbjct: 2 ENKLKLVV--VGDTYTG--KTSLLVAYTKKQFLDNYTTTVFDNWAV-SVHIDNKNYAVNL 56
Query: 392 WDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKS 511
+DTAGQ + I Y A+ ++ + D+ + + +S
Sbjct: 57 FDTAGQGNYEQIRCLSYPHANVFLVCFSMIDRKTLESCRS 96
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 502 REKWLEEIDRYACDNVNKLLVGNKCDL 582
R W+ EI +YA DNV +LVG K DL
Sbjct: 95 RSTWIPEIRKYAGDNVPIMLVGTKNDL 121
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
G GK+ +L + + T + I TIG F + TV + I L +WD GQ++ R + Y
Sbjct: 27 GAGKTTILYKLKLNE-TVNTIPTIG--FNVETVTF--QKITLTVWDVGGQKKIRALWKYY 81
Query: 440 YRGAHGIIIVYDCTDQDSFSNVK 508
+ ++ V D +D + K
Sbjct: 82 FPNTTTLVFVVDSSDIERIPEAK 104
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 358
+GVGK+CL+ +F + +TIGVDF I+TV
Sbjct: 16 AGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTV 49
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 371 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFS 499
+T L I+D G + R I S+YY HGII V D + ++F+
Sbjct: 67 ETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFT 109
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 371 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFS 499
+T L I+D G + R I S+YY HGII V D + ++F+
Sbjct: 67 ETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFT 109
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 35.1 bits (77), Expect = 0.043
Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +2
Query: 266 GKSCLLLRF-ADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYY 442
GK+ +L + +T ++ + T+G + T + + + + +D AGQ ++R+ SY+
Sbjct: 29 GKTTILNQLKTPETRSQQIVPTVG---HVVT-NFSTQNLSFHAFDMAGQMKYRSTWESYF 84
Query: 443 RGAHGIIIVYDCTDQ 487
+ G+I V D +D+
Sbjct: 85 HSSQGVIFVLDSSDR 99
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 371 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV 505
+T L++WD G R ++ GA G I+V+D T++ S N+
Sbjct: 64 RTELLELWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRSEENL 108
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 34.7 bits (76), Expect = 0.057
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 266 GKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYR 445
GK+ +L + E+ TIG + + +++ + + IWD GQE R S+YY
Sbjct: 29 GKTTILYNYVTKDQVETK-PTIGSNVE----EVSYRNLDFVIWDIGGQESLRKSWSTYYV 83
Query: 446 GAHGIIIVYDCTD 484
+I+V D +D
Sbjct: 84 QTDVVIVVIDSSD 96
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFK 346
SGVGKS L+LRF DD +IGV F+
Sbjct: 6 SGVGKSSLMLRFVDDVVDPERAVSIGVPFR 35
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 28.3 bits (60), Expect(2) = 0.11
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 263 VGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGK----TIKLQIWDTAGQ 409
VGK+CL R ++ E Y++T + ++ ++ N + +K+ +WD Q
Sbjct: 54 VGKTCLWKRLQGLSFQEEYVAT--EEIQVANINWNYRATDDVVKVDVWDIVDQ 104
Score = 24.2 bits (50), Expect(2) = 0.11
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 395 DTAGQERFRTITSSYYRGAHGIIIVYDCT 481
DTA RF + Y+G +G+I V+D T
Sbjct: 132 DTACDARFVDV----YKGTNGVIFVFDIT 156
>Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 263 VGKSCLLLRFA--DDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTIT-- 430
VGK+ +L + A +D + Y TI +++ + + L + DTAG + I
Sbjct: 180 VGKTAILRQVACVEDVTNKPYEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELK 239
Query: 431 SSYYRGAHGIIIVYDCTDQDSFSNV 505
+Y + A ++VY D +SF+ V
Sbjct: 240 KAYVQAADAFVLVYSSADYESFNRV 264
>Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical
protein F52A8.6c protein.
Length = 199
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 263 VGKSCLLLRFA--DDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTIT-- 430
VGK+ +L + A +D + Y TI +++ + + L + DTAG + I
Sbjct: 15 VGKTAILRQVACVEDVTNKPYEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELK 74
Query: 431 SSYYRGAHGIIIVYDCTDQDSFSNV 505
+Y + A ++VY D +SF+ V
Sbjct: 75 KAYVQAADAFVLVYSSADYESFNRV 99
>Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +2
Query: 263 VGKSCLLLRFA--DDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTIT-- 430
VGK+ +L + A +D + Y TI +++ + + L + DTAG + I
Sbjct: 180 VGKTAILRQVACVEDVTNKPYEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELK 239
Query: 431 SSYYRGAHGIIIVYDCTDQDSFSNV 505
+Y + A ++VY D +SF+ V
Sbjct: 240 KAYVQAADAFVLVYSSADYESFNRV 264
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +2
Query: 260 GVGKSCLLLRFAD---DTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTIT 430
G GK+ ++ R DT + TIG F I T+ K +L WD G + R +
Sbjct: 379 GAGKTSIVRRLKKVQMDTVMAPH-PTIG--FNIETIHY--KNYRLNFWDVGGLPKLRHLW 433
Query: 431 SSYYRGAHGIIIVYDCTDQDSFS 499
YY A I V D + FS
Sbjct: 434 KHYYSNAQAIFYVIDGYAVERFS 456
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 257 SGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGK----TIKLQIWDTAGQ 409
SGVGK+ ++ R + +TIG F V + + ++LQ+WDTAGQ
Sbjct: 61 SGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMWDTAGQ 115
>U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6
protein.
Length = 636
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 383 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSN 502
L I T GQ R+ + + YRG++ + + TD+DS+ N
Sbjct: 265 LTIIKTIGQGRYGEVRKALYRGSYVAVKTFYTTDEDSWKN 304
>AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threonine
kinase SMA-6 protein.
Length = 636
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 383 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSN 502
L I T GQ R+ + + YRG++ + + TD+DS+ N
Sbjct: 265 LTIIKTIGQGRYGEVRKALYRGSYVAVKTFYTTDEDSWKN 304
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 278 LLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQ 388
L+ ++ + + Y +TIG DF R V+++ +T+ LQ
Sbjct: 34 LMNQYVNRRFMNQYKATIGADFLTRDVNIDDRTVTLQ 70
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/84 (21%), Positives = 39/84 (46%)
Frame = +2
Query: 260 GVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSY 439
G GK+ L++ +D + ++ + D + D+ + + I D + +E S
Sbjct: 19 GCGKTSLVMSLLEDEWVDAVPRRL--DRVLIPADVTPENVTTSIVDLSIKEEDENWIVSE 76
Query: 440 YRGAHGIIIVYDCTDQDSFSNVKS 511
R A+ I +VY TD+ + +++
Sbjct: 77 IRQANVICVVYSVTDESTVDGIQT 100
>AL117199-2|CAB55041.1| 189|Caenorhabditis elegans Hypothetical
protein Y43F11A.4 protein.
Length = 189
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 493 IQQREKWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFS 609
++QR K LE++D+ +N+ +G+ C + KK VD+S
Sbjct: 124 MEQRMKDLEKMDQKTANNLFVAALGDSCFIPKKK-VDYS 161
>AL117199-1|CAB55038.1| 189|Caenorhabditis elegans Hypothetical
protein Y43F11A.1 protein.
Length = 189
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 493 IQQREKWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFS 609
++QR K LE++D+ +N+ +G+ C + KK VD+S
Sbjct: 124 MEQRMKDLEKMDQKTANNLFVAALGDSCFIPKKK-VDYS 161
>AC024749-2|AAF60435.2| 444|Caenorhabditis elegans Hypothetical
protein Y16E11A.1 protein.
Length = 444
Score = 27.5 bits (58), Expect = 8.7
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +2
Query: 326 TIGVDFKIRTVDLNGKTIKLQI 391
T+ VD+K++ + +NG+ + LQ+
Sbjct: 414 TVEVDYKLKLISVNGQNVSLQL 435
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,318,176
Number of Sequences: 27780
Number of extensions: 284608
Number of successful extensions: 769
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -