Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0090
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   3.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   4.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 268 PARHLTYIPHVNFQGPQRVSGHRRKC 191
           P   LT+    NF GP R++   R+C
Sbjct: 592 PREQLTW--RRNFHGPHRLAARSRRC 615



 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 107 PDLSAASSGHFGLPRRTLVFKDEG 36
           P +S++     G      VFKDEG
Sbjct: 2   PHVSSSGGDDLGSTDEVKVFKDEG 25


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 268 PARHLTYIPHVNFQGPQRVSGHRRKC 191
           P   LT+    NF GP R++   R+C
Sbjct: 484 PREQLTW--RRNFHGPHRLAARSRRC 507


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 436  GHRAASASRPNPTRPGPQSQSLFRSYGSNLPTSLT 332
            GH+ +++S   PT+P  +  S    + +   TS T
Sbjct: 1158 GHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTSTT 1192


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 153 RIPWNSNAQAEKKTLPGPLG 94
           +IPW+ NA+A  K   G  G
Sbjct: 330 QIPWDKNAEALAKWANGQTG 349


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -2

Query: 364 SYGSNLPTSLTYIILSTRGSSPWRPAAEYGY 272
           ++G  L  +LTY++++      W     +GY
Sbjct: 111 TFGRFLAPNLTYLLVALYSGYVWTDILGFGY 141


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = -1

Query: 248 HPSREFSRSAESIRTPPQMRCSSRSE-----PYLPSIGFH 144
           HP    S+ + +   PPQ+  + R E     P +P + F+
Sbjct: 217 HPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPYVPFY 256


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 438 PGTGPHPLPVQTRHA 394
           PG G H LPV + H+
Sbjct: 42  PGLGLHGLPVDSLHS 56


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 513 PSSGRIILKYLTSLKTKHNARTSTRPGTGP 424
           P+  R I K L S       ++S RP  GP
Sbjct: 159 PNMYRTIKKRLRSCDLCQKTKSSNRPHQGP 188


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 423 HPLPVQTRHAPVLRANPYS 367
           HPL + + H  +L  NP S
Sbjct: 335 HPLSLSSDHQAMLHHNPMS 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,675
Number of Sequences: 336
Number of extensions: 3576
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)