Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0090
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.1  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   1.9  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      23   7.7  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   7.7  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   7.7  
AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    23   7.7  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 115 NSSRTSRRRLQATL 74
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -1

Query: 425 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYSID*RLFTLETCCGIW 276
           R+R  +   TP+    +++PKL+ + A  P+        L  ++T  G+W
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPF--------LLQIQTIAGLW 46


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = -3

Query: 504 GRIILKYLTSLK-TKHNARTSTRPGTGPHPLPVQTRHAPVLRANPYSEVTDPICRLP 337
           G I L  L S + T  N  +   P   PH  P Q   AP++  +  + V    C  P
Sbjct: 12  GAIALLLLVSTEMTFANPLSPNSPAERPHIQPFQMASAPLVAQSRSAMVQTLTCTNP 68


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 177 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 58
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 177 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 58
           F T+   Y    N+ A +   T  G   G FRP+  TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251


>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 258 CRAGSYPYSAAGLQGEEPLVDRIM*VREVGKLDP*LRNKD 377
           C+ G+YP   A ++ + P     + ++ V  LDP ++  D
Sbjct: 83  CKFGAYPQIQAFIKSDRPAKFPNLTIKYVRGLDPIVKLMD 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,851
Number of Sequences: 2352
Number of extensions: 15899
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)