Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0090
(605 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.8
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 3.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 3.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 3.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 3.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 3.1
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 4.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 5.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.4
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 21 9.4
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 441 RPGTGPHPLPVQTRHAPVLRANPYSEV 361
+ G P PLP A + + +PYS +
Sbjct: 647 KDGQSPFPLPPNLASANISQLDPYSSL 673
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -1
Query: 452 EHRPDRAPGRIRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYS 321
E+R R R R + + RS EP +I L + Y +Y+
Sbjct: 55 EYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYN 98
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -1
Query: 452 EHRPDRAPGRIRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYS 321
E+R R R R + + RS EP +I L + Y +Y+
Sbjct: 55 EYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYN 98
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -1
Query: 452 EHRPDRAPGRIRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYS 321
E+R R R R + + RS EP +I L + Y +Y+
Sbjct: 55 EYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYN 98
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -1
Query: 452 EHRPDRAPGRIRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYS 321
E+R R R R + + RS EP +I L + Y +Y+
Sbjct: 55 EYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYN 98
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -1
Query: 278 WVRTGATSHVHPSREFSRSAESIRTP 201
W+ G T + + S+ +++RTP
Sbjct: 516 WIERGTTKSMEAANIMSKLPKTVRTP 541
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 107 PDLSAASSGHFGLPRRTLVFK 45
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 176 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 93
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 153 RIPWNSNAQAEKKTLPGPLG 94
+IPW+ N +A K G G
Sbjct: 334 QIPWDKNVEALAKWANGQTG 353
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 203 VSGYSLRTLKIHVRDVREM 259
V+ ++ LKI +RDV+E+
Sbjct: 14 VNAMTIEELKIQLRDVQEI 32
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 62 DGVTQSGLKTPPRGPG 109
DG L +PPR PG
Sbjct: 128 DGPPSVSLSSPPREPG 143
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,420
Number of Sequences: 438
Number of extensions: 4648
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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