Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0089
         (426 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2Q0J5 Cluster: D2.2; n=1; Hyposoter fugitivus ichnovir...    32   5.7  
UniRef50_Q8IJJ2 Cluster: Putative uncharacterized protein; n=3; ...    31   7.5  
UniRef50_Q2RLZ0 Cluster: Putative uncharacterized protein precur...    31   9.9  
UniRef50_A5ZW15 Cluster: Putative uncharacterized protein; n=1; ...    31   9.9  
UniRef50_Q5BIG3 Cluster: RE52861p; n=4; Diptera|Rep: RE52861p - ...    31   9.9  

>UniRef50_A2Q0J5 Cluster: D2.2; n=1; Hyposoter fugitivus
           ichnovirus|Rep: D2.2 - Hyposoter fugitivus ichnovirus
          Length = 120

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +3

Query: 276 KNAILNRKSNCNYNKICSRHVNSQWT*NRSAD 371
           K+ + +R   C   K+ ++H+ S+WT +RSAD
Sbjct: 32  KSPVTSRTQQCRLKKLKTQHLLSRWTPSRSAD 63


>UniRef50_Q8IJJ2 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1934

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -2

Query: 140 NQLSLLHLNS*RINFFVMIFFPNSKLQIALL*CCKNV 30
           N+L  LH+    IN F  I+ PN K+ I +L  CKN+
Sbjct: 521 NKLKCLHIYI--INIFKNIYHPNMKILINILTICKNI 555


>UniRef50_Q2RLZ0 Cluster: Putative uncharacterized protein
           precursor; n=1; Moorella thermoacetica ATCC 39073|Rep:
           Putative uncharacterized protein precursor - Moorella
           thermoacetica (strain ATCC 39073)
          Length = 636

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -1

Query: 387 MNVAIRRLIGFMSIASLRDENKFYCNYNYFYGLKLRFFIKL 265
           +  A+  L+G ++IA++  +N F    N F G+K+ F + L
Sbjct: 431 LRTALISLLGAVAIAAILADNTFILKINQFSGVKIAFIVPL 471


>UniRef50_A5ZW15 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 699

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = -1

Query: 312 NYNYFYGLKLRFFIKLSLLLEG*KA--IRFK*YYT*YATFIFVI 187
           N++YF+GL LRF +  S + E   +  +RF  +YT ++  +F +
Sbjct: 30  NFSYFFGLLLRFDLAYSSIPENYLSAFLRFAPFYTAFSLIVFYV 73


>UniRef50_Q5BIG3 Cluster: RE52861p; n=4; Diptera|Rep: RE52861p -
           Drosophila melanogaster (Fruit fly)
          Length = 429

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +1

Query: 10  CRWVLHATFLQHYRRAI*SLEFGKNIMTKKLILQLFKWSKLN*LKTSNC*C*YQIKR-TL 186
           C W L  TF++ Y      LE+ K++  +       KWS L   KT N  C Y  KR T+
Sbjct: 26  CLWTLAVTFIRIYWIFFVPLEWKKDLDNE-------KWSFLR--KTENVVC-YNHKRDTI 75

Query: 187 NYKDKCRVLSVISLKP 234
           N   K ++  +I L P
Sbjct: 76  NRLRKLKIQKIIELPP 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,051,630
Number of Sequences: 1657284
Number of extensions: 5341918
Number of successful extensions: 9778
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9778
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)