Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0088
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    47   7e-07
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.1  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   9.6  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 46.8 bits (106), Expect = 7e-07
 Identities = 21/61 (34%), Positives = 38/61 (62%)
 Frame = +2

Query: 284 IETVKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHI 463
           +  V++V  +K   +P+G+T+   E G+ IVARI+ G    +QA + VGD + E++G  +
Sbjct: 471 VTRVRLVQFQKNTDEPMGITLKMTEDGRCIVARIMHGGMIHRQATLHVGDEIREINGQPV 530

Query: 464 E 466
           +
Sbjct: 531 Q 531


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +2

Query: 296  KVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGV 457
            KV+  R  P Q  G     D+H QLI A+   G    K A ++      E+ G+
Sbjct: 2256 KVLSTRSFPYQ-YGHRYDYDDHDQLIKAKYFHGLEELKLAPLTYHTFHKEIKGI 2308


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 295 YCFYRHIAVTLGTLFENSIRSGNSFGINLSSIPD 194
           Y F++   +T   LF N I + +   + +S++PD
Sbjct: 634 YTFFKKPNLTRVDLFGNKITTLDPNALRISAVPD 667


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,833
Number of Sequences: 2352
Number of extensions: 16572
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)